From user-return-3029-apmail-uima-user-archive=uima.apache.org@uima.apache.org Wed May 12 18:43:34 2010 Return-Path: Delivered-To: apmail-uima-user-archive@www.apache.org Received: (qmail 79921 invoked from network); 12 May 2010 18:43:34 -0000 Received: from unknown (HELO mail.apache.org) (140.211.11.3) by 140.211.11.9 with SMTP; 12 May 2010 18:43:34 -0000 Received: (qmail 41969 invoked by uid 500); 12 May 2010 18:43:34 -0000 Delivered-To: apmail-uima-user-archive@uima.apache.org Received: (qmail 41897 invoked by uid 500); 12 May 2010 18:43:34 -0000 Mailing-List: contact user-help@uima.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: user@uima.apache.org Delivered-To: mailing list user@uima.apache.org Received: (qmail 41889 invoked by uid 99); 12 May 2010 18:43:34 -0000 Received: from athena.apache.org (HELO athena.apache.org) (140.211.11.136) by apache.org (qpsmtpd/0.29) with ESMTP; Wed, 12 May 2010 18:43:34 +0000 X-ASF-Spam-Status: No, hits=2.2 required=10.0 tests=AWL,FREEMAIL_FROM,HTML_MESSAGE,SPF_PASS,T_TO_NO_BRKTS_FREEMAIL X-Spam-Check-By: apache.org Received-SPF: pass (athena.apache.org: domain of aradwen@gmail.com designates 74.125.82.175 as permitted sender) Received: from [74.125.82.175] (HELO mail-wy0-f175.google.com) (74.125.82.175) by apache.org (qpsmtpd/0.29) with ESMTP; Wed, 12 May 2010 18:43:29 +0000 Received: by wyb34 with SMTP id 34so287986wyb.6 for ; Wed, 12 May 2010 11:43:08 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=gamma; h=domainkey-signature:received:mime-version:received:in-reply-to :references:from:date:message-id:subject:to:content-type; bh=Jv0y17/HUSvzLN7snxPKsJ5QXBV/iCp9HTT36VdT7gw=; b=K3c7xIuBdsPZTvQfixy5BfaTU5pb7C02COqIOUAyf/wYiGFcjQtX7jvqlH0UCxn24W K41eXFMF3JrVyFRbV0b3krQVeRCWdLQ15SsGUyAe92Qyzqr1Uiuud11T69jQQT9kLpRN 4vrm3Lpnc3GXbhgb+VRY7nM1MruOlWCmcwPew= DomainKey-Signature: a=rsa-sha1; c=nofws; d=gmail.com; s=gamma; h=mime-version:in-reply-to:references:from:date:message-id:subject:to :content-type; b=wiQeowgS4iWDnF7OFLBka4gkyBmvDw8WGflho0zKEtoyv5Cb362gns0hFe73A031eR kpJJt4QqpRXhNpmU5JHztMkfUbN6MbOb1ADNoFvYcNfHzXV/rwGliNbJhnHoNxYRHMwY rDlfZKs2X3HTKWLmcheV0Iy3luyXj6Nwy9Ir8= Received: by 10.216.155.196 with SMTP id j46mr4768357wek.1.1273689788437; Wed, 12 May 2010 11:43:08 -0700 (PDT) MIME-Version: 1.0 Received: by 10.216.28.76 with HTTP; Wed, 12 May 2010 11:42:48 -0700 (PDT) In-Reply-To: References: From: Radwen Aniba Date: Wed, 12 May 2010 20:42:48 +0200 Message-ID: Subject: Re: UIMA stops suddenly To: user@uima.apache.org Content-Type: multipart/alternative; boundary=00163646cf3a64d4a804866a0348 --00163646cf3a64d4a804866a0348 Content-Type: text/plain; charset=ISO-8859-1 Content-Transfer-Encoding: quoted-printable it is very possible that an annotator hang (since a treatement could be lon= g to do) and if this is the case is there a way to let him hang anyway ? Why an annotator stops when it takes a while treating a document ? 2010/5/12 Adam Lally > On Wed, May 12, 2010 at 1:35 PM, Eddie Epstein > wrote: > > > It is possible that the user's annotator code is hanging. Either add > > code to trace the annotator entry and exit, or turn on UIMA logging at > > level FINE to see what the last thing being done is. > > > > Eddie > > > > On Wed, May 12, 2010 at 5:41 AM, Radwen Aniba wrote= : > > > Hi everybodey, > > > > > > I developped an application using UIMA and while running it on a big > set > > of > > > documents which takes some time to process, UIMA suddenly stops witho= ut > > any > > > error message or warning > > > > > > Is there anything I can do to know where the problem occur ? > > > > > > Thanks for help > > > > > > Rad > > > > > > -- > > > > > > > There's a convenient utility called jstack that comes with Java that lets > you examine the stack track of any running process. See > http://java.sun.com/j2se/1.5.0/docs/tooldocs/share/jstack.html > > By looking at the stack traces you should be able to tell if any of them > are > hung inside annotator code. > > -Adam > --=20 R. ANIBA Bioinformatics PhD Laboratoire de Bioinformatique et G=E9nomique Int=E9gratives, Institut de G=E9n=E9tique et de Biologie Mol=E9culaire et Cellulaire (IGBMC= ), 1 rue Laurent Fries, 67404 Illkirch, France. http://www-igbmc.u-strasbg.fr http://alnitak.u-strasbg.fr/~aniba/alexsys --00163646cf3a64d4a804866a0348--