From uima-user-return-1380-apmail-incubator-uima-user-archive=incubator.apache.org@incubator.apache.org Wed Jun 11 15:01:41 2008 Return-Path: Delivered-To: apmail-incubator-uima-user-archive@locus.apache.org Received: (qmail 71481 invoked from network); 11 Jun 2008 15:01:41 -0000 Received: from hermes.apache.org (HELO mail.apache.org) (140.211.11.2) by minotaur.apache.org with SMTP; 11 Jun 2008 15:01:41 -0000 Received: (qmail 24013 invoked by uid 500); 11 Jun 2008 15:01:43 -0000 Delivered-To: apmail-incubator-uima-user-archive@incubator.apache.org Received: (qmail 23992 invoked by uid 500); 11 Jun 2008 15:01:43 -0000 Mailing-List: contact uima-user-help@incubator.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: uima-user@incubator.apache.org Delivered-To: mailing list uima-user@incubator.apache.org Received: (qmail 23981 invoked by uid 99); 11 Jun 2008 15:01:42 -0000 Received: from athena.apache.org (HELO athena.apache.org) (140.211.11.136) by apache.org (qpsmtpd/0.29) with ESMTP; Wed, 11 Jun 2008 08:01:42 -0700 X-ASF-Spam-Status: No, hits=2.0 required=10.0 tests=HTML_MESSAGE,SPF_PASS X-Spam-Check-By: apache.org Received-SPF: pass (athena.apache.org: domain of ahmed.elmasri@gmail.com designates 64.233.166.183 as permitted sender) Received: from [64.233.166.183] (HELO py-out-1112.google.com) (64.233.166.183) by apache.org (qpsmtpd/0.29) with ESMTP; Wed, 11 Jun 2008 15:00:54 +0000 Received: by py-out-1112.google.com with SMTP id u52so1174471pyb.13 for ; Wed, 11 Jun 2008 08:01:12 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=gamma; h=domainkey-signature:received:received:message-id:date:from:to :subject:mime-version:content-type; bh=O1c2wFASCOOWqvtAuRGLM4ve56H2CB2bTIFwX+YUpbM=; b=JEPQqjJfzvo42UA4gm4xM2nR2vXV9+UCPJu3NpFd2/pBI8KBNa2Hf/joPmK8+Zt3Nb guvo2OUgOA7dAM9DwFs7JezM/H3ct3v7b+sr1AQYcqmPVSzkXv8Ql6JLc7yiIqxq0YL+ gk96KIzXYrofjWSa3j6EsjGNM8xQHngno9tTs= DomainKey-Signature: a=rsa-sha1; c=nofws; d=gmail.com; s=gamma; h=message-id:date:from:to:subject:mime-version:content-type; b=ZjU29t7aDaZWWB/GmI9f+NOMegqCFAzqycPbvM8cMO3Yr6F9ndHMC7ujK4HUr1G0EO sLsfJm6TER6dTONqlSMiDG9gPE+41De3GXhaV5qDElFWMw3wvLCCn14f97iw4oBekSTx HGZapsGHqvhpIVoaB0XC262ezdSRN/HqDvo4U= Received: by 10.141.89.13 with SMTP id r13mr3975252rvl.88.1213196471473; Wed, 11 Jun 2008 08:01:11 -0700 (PDT) Received: by 10.141.193.15 with HTTP; Wed, 11 Jun 2008 08:01:11 -0700 (PDT) Message-ID: <5cdd31570806110801j5a373846r51795c86d38427ed@mail.gmail.com> Date: Wed, 11 Jun 2008 11:01:11 -0400 From: "Ahmed Abdeen(Home)" To: uima-user@incubator.apache.org Subject: bioNLP UIMA MIME-Version: 1.0 Content-Type: multipart/alternative; boundary="----=_Part_27261_20151690.1213196471452" X-Virus-Checked: Checked by ClamAV on apache.org ------=_Part_27261_20151690.1213196471452 Content-Type: text/plain; charset=ISO-8859-1 Content-Transfer-Encoding: 7bit Content-Disposition: inline Apologies from cross-listing! Hello,I am trying to compile bioNLP UIMA tools but I am getting the following errors: Buildfile: build.xml compile: [javac] Compiling 161 source files to /Users/ahmedabdeenhamed/Projects/bionlp_uima_repository-1.0.1/build/classes [javac] /Users/ahmedabdeenhamed/Projects/bionlp_uima_repository-1.0.1/src/edu/uchsc/ccp/util/external/stanfordparser/StanfordParser_Util.java:48: cannot find symbol [javac] symbol : class TypedDependencyList [javac] location: package edu.stanford.nlp.trees [javac] import edu.stanford.nlp.trees.TypedDependencyList; [javac] ^ [javac] /Users/ahmedabdeenhamed/Projects/bionlp_uima_repository-1.0.1/src/edu/uchsc/ccp/util/external/stanfordparser/StanfordParser_Util.java:418: cannot find symbol [javac] symbol : class TypedDependencyList [javac] location: class edu.uchsc.ccp.util.external.stanfordparser.StanfordParser_Util [javac] TypedDependencyList tdl = gs.typedDependencies(); [javac] ^ [javac] /Users/ahmedabdeenhamed/Projects/bionlp_uima_repository-1.0.1/src/edu/uchsc/ccp/util/external/penn/PennBioTokenizer_Util.java:49: cannot find symbol [javac] symbol : constructor BioTokenizer(java.lang.String) [javac] location: class edu.upenn.cis.tokenizers.BioTokenizer [javac] bt = new BioTokenizer(tokenizerModelFile); [javac] ^ [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 3 errors BUILD FAILED If you have had experience with bioNLP UIMA and got it to compile, please let me know. I could use some help. Thanks in advance! Ahmed ------=_Part_27261_20151690.1213196471452--