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From Mark Shifman <mark.shif...@yale.edu>
Subject Re: FW: Mascot Server update now available
Date Wed, 04 Aug 2010 19:26:27 GMT
I just installed the new patch for Mascot.
and mascot is running.
mas

On 08/02/2010 06:57 PM, Kathryn Stone wrote:
> Hi guys-
> 
>  
> 
> Can you do the update on the Linux?  Thanks
> 
>  
> 
> Kathy
> 
>  
> 
> MS & Proteomics Resource
> 
> W.M. Keck Biotechnology Resource Laboratory
> 
> Rm G001
> 
> 300 George Street
> 
> New Haven CT 06511
> 
>  
> 
> kathryn.stone@yale.edu
> 
>  
> 
> *From:* Matrix Science Technical Support [mailto:support@matrixscience.com]
> *Sent:* Monday, August 02, 2010 6:50 PM
> *To:* Kathy Stone
> *Subject:* Mascot Server update now available
> 
>  
> 
> Dear Kathy Stone,
> 
> An update for Mascot 2.3 for Linux is now available for download.
> 
> Separate downloads are available for the 64 bit and 32 bit versions:
> - 64 bit:
> http://www.matrixscience.com/patch/mascot_2_3_01_patch_x86_64-linux.tar.bz2
> - 32 bit:
> http://www.matrixscience.com/patch/mascot_2_3_01_patch_i86_rh80.tar.bz2
> 
> You will be required to enter a user name and password to download the
> update:
> User name: yu_ks
> Password: 84r2hr93
> 
> This patch should only be used on a Mascot 2.3 installation. It will not
> update files from 2.2.x and earlier versions.
> 
> To install the software:
> 
>     * check that there are no searches running on the server
>     * stop the ms-monitor.exe daemon
>     * copy the patch to /usr/local/mascot (or to wherever Mascot is
>       installed)
>     * bunzip2 mascot_2_3_01_patch_x86_64-linux.tar.bz2
>     * tar xvf mascot_2_3_01_patch_x86_64-linux.tar
>     * If Apache is configured to run under "apache" rather than "nobody"
>       (the latter being the values in the tar archive), then the
>       permissions will now be wrong.  To fix this:
>         find . -user nobody | xargs chown apache:apache
>     * start the ms-monitor.exe daemon
> 
> (For the 32 bit release, substitute the 32 bit filename in the above
> commands)
> 
> A list of the changes made can be found at
> http://www.matrixscience.com/mascot_support.html#2.3.
> 
> Please don't hesitate to contact me if you have any questions.
> 
> Best regards,
> 
> Richard Jacob
> -- 
> Richard Jacob
> Country Manager, North America
> Matrix Science Inc.
> 225 Franklin St., 26th fl.,
> Boston, MA 02110, USA
> Tel: (800) 716 6702
> Fax: (800) 716 6704
> richardj@matrixscience.com
> http://www.matrixscience.com
> 

-- 
 Mark Shifman MD. Ph.D.
 Yale Center for Medical Informatics
 Phone (203)737-5219
 mark.shifman@yale.edu

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