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From Marco Masseroli <marco.masser...@polimi.it>
Subject Re: Taverna Workbench Bioinformatics 2.5
Date Thu, 05 Jan 2017 13:06:30 GMT
Hi Alan,

Thank you for your fast answer.
Please let me know when you have a possible solution.

Best,

         Marco


Il 05/01/2017 13.47, Alan Williams ha scritto:
> On 05-Jan-17 11:54, Marco Masseroli wrote:
>> Hi.
>>
>> Within the Taverna Workbench Bioinformatics 2.5, using the local service
>> "ncbi Gel Protein FASTA" with input id "1220173" (as in the tutorial),
>> now the returned result is:
>>
>> <!DOCTYPE HTML PUBLIC "-//IETF//DTD HTML 2.0//EN">
>> <html><head>
>> <title>301 Moved Permanently</title>
>> </head><body>
>> <h1>Moved Permanently</h1>
>> <p>The document has moved <a
>> href="https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?rettype=fasta&amp;db=protein&amp;retmode=text&amp;id=1220173">here</a>.</p>

>>
>> </body></html>
>>
>> I think all local services of "ncbi" included in the Workbench should be
>> updated with the new url; could you please confirm (possibly adding when
>> the update will be available)?
>
> Hello
>
> I can confirm the problem. It appears not to be as simple as changing 
> the script to fetch from https rather than http.
>
> I will discuss it with the other developers when they are back in the 
> New Year.
>
>> Thank you.
>> Best,
>>
>>     Marco
>
> Alan


-- 
*Marco Masseroli, PhD*
Associate Professor
Dipartimento di Elettronica, Informazione e Bioingegneria
Politecnico di Milano
Piazza Leonardo da Vinci 32 - 20133 Milano, Italy
http://www.bioinformatics.deib.polimi.it/masseroli/
Tel. Office: +39 02 2399 3553; Lab: +39 02 2399 3631
Skype ID: masserolim

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