Return-Path: X-Original-To: apmail-taverna-users-archive@minotaur.apache.org Delivered-To: apmail-taverna-users-archive@minotaur.apache.org Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by minotaur.apache.org (Postfix) with SMTP id E7FAA18D96 for ; Fri, 7 Aug 2015 13:47:49 +0000 (UTC) Received: (qmail 78851 invoked by uid 500); 7 Aug 2015 13:47:49 -0000 Delivered-To: apmail-taverna-users-archive@taverna.apache.org Received: (qmail 78811 invoked by uid 500); 7 Aug 2015 13:47:49 -0000 Mailing-List: contact users-help@taverna.incubator.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: users@taverna.incubator.apache.org Delivered-To: mailing list users@taverna.incubator.apache.org Received: (qmail 78801 invoked by uid 99); 7 Aug 2015 13:47:49 -0000 Received: from Unknown (HELO spamd2-us-west.apache.org) (209.188.14.142) by apache.org (qpsmtpd/0.29) with ESMTP; Fri, 07 Aug 2015 13:47:49 +0000 Received: from localhost (localhost [127.0.0.1]) by spamd2-us-west.apache.org (ASF Mail Server at spamd2-us-west.apache.org) with ESMTP id 307491A9A44 for ; Fri, 7 Aug 2015 13:47:49 +0000 (UTC) X-Virus-Scanned: Debian amavisd-new at spamd2-us-west.apache.org X-Spam-Flag: NO X-Spam-Score: 2.899 X-Spam-Level: ** X-Spam-Status: No, score=2.899 tagged_above=-999 required=6.31 tests=[DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, HTML_MESSAGE=3, SPF_PASS=-0.001] autolearn=disabled Authentication-Results: spamd2-us-west.apache.org (amavisd-new); dkim=pass (2048-bit key) header.d=gmail.com Received: from mx1-us-west.apache.org ([10.40.0.8]) by localhost (spamd2-us-west.apache.org [10.40.0.9]) (amavisd-new, port 10024) with ESMTP id OfnWYWlpuSyp for ; Fri, 7 Aug 2015 13:47:34 +0000 (UTC) Received: from mail-la0-f51.google.com (mail-la0-f51.google.com [209.85.215.51]) by mx1-us-west.apache.org (ASF Mail Server at mx1-us-west.apache.org) with ESMTPS id 73D62215CD for ; Fri, 7 Aug 2015 13:47:33 +0000 (UTC) Received: by lagz9 with SMTP id z9so22346616lag.3 for ; Fri, 07 Aug 2015 06:46:46 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=mime-version:date:message-id:subject:from:to:content-type; bh=LNxn9MsWkJmBcGZXb6nZPZCQp+8dN8D7G/+J06hxXcg=; b=AjfzZiSZ+3swVZ9eWMqRxWPPvaUIeXSJFd4EDpOxT9iokY9XnLIJdygNSLed+ZL34G dcErRAc/Ih8i8jR7CYoE1bxKsAfQ9t3qXtnxA8nrveZYHRYHntsITDD7fxKrLIsvfn0e +UIAAE8E/ew1SJx6BPYwWTpWqPl+7ayVQUHtQTrA40Q58Ies1/0vhfm6LHcahsfeY8uL o521I3MDpnghRi32b4av9kjFD7kKZ8prZjOdfV8TFvjs+UNmb38gZ1ZzqUxqqgKV+rkD VIpmKfcoecnDRwnh1Q345V7iWUIOG97N1h6uxcLp2xNzNHRvucFBWGusq45TMvHS9G4i UYdQ== MIME-Version: 1.0 X-Received: by 10.112.141.8 with SMTP id rk8mr7473422lbb.87.1438955206736; Fri, 07 Aug 2015 06:46:46 -0700 (PDT) Received: by 10.25.134.197 with HTTP; Fri, 7 Aug 2015 06:46:46 -0700 (PDT) Date: Fri, 7 Aug 2015 23:46:46 +1000 Message-ID: Subject: aligning paired end reads with BWA From: Mic To: users@taverna.incubator.apache.org Content-Type: multipart/alternative; boundary=001a11c33d5ef2018f051cb8dd48 --001a11c33d5ef2018f051cb8dd48 Content-Type: text/plain; charset=UTF-8 Hello, How is it possible to align pairend reads with BWA in taverna? Thank you in advance. Mic --001a11c33d5ef2018f051cb8dd48 Content-Type: text/html; charset=UTF-8
Hello,
How is it possible to align pairend reads with BWA in taverna?

Thank you in advance.

Mic
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