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From Stian Soiland-Reyes <st...@apache.org>
Subject Re: Batch File Execution Through Taverna
Date Mon, 24 Sep 2018 09:22:38 GMT
On Thu, 13 Sep 2018 09:25:07 +0500, Rabia Ahmad <rabianabi3@gmail.com> wrote:
> Is there any method to execute batch file in shell script using Taverna
> Workbench, Taverna server or taverna command line tool?

Yes, using the Tool service you can execute any shell commands.


You can try to put the script straight into the "Command" tab. The lines
will be executed one by one.

However if your script is pre-existing file, or have a bit of logic with
parameters, etc then you could instead embed the script as a fixed File
under Advanced, and then under Command just execute that file with "sh

This latter mechanism can also be used to execute scripts in other
languages like Python.

Stian Soiland-Reyes

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