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From Gale Naylor <Ga...@noventussolutions.com>
Subject Re: Release of Taverna Command Line?
Date Mon, 23 May 2016 14:01:52 GMT
Sorry, BUILD FAILURE again. Actually, two: Dummy Taverna activity
and Apache Taverna Activity archetype.

[INFO] [INFO]
------------------------------------------------------------------------
[INFO] [INFO] Reactor Summary:
[INFO] [INFO]
[INFO] [INFO] Dummy Taverna project .............................. SUCCESS
[ 12.754 s]
[INFO] [INFO] Dummy Taverna activity ............................. FAILURE
[ 23.582 s]
[INFO] [INFO] Dummy Taverna plugin ............................... SKIPPED
[INFO] [INFO]
------------------------------------------------------------------------
[INFO] [INFO] BUILD FAILURE
[INFO] [INFO]
------------------------------------------------------------------------
[INFO] [INFO] Total time: 38.075 s
[INFO] [INFO] Finished at: 2016-05-23T06:51:36-07:00
[INFO] [INFO] Final Memory: 26M/202M
[INFO] [INFO]
------------------------------------------------------------------------
[INFO] [ERROR] Failed to execute goal
org.apache.maven.plugins:maven-surefire-plugin:2.19.1:test (default-test)
on project dummy-taverna-plugin-activity: Execution default-test of goal
org.apache.maven.plugins:maven-surefire-plugin:2.19.1:test failed: The
forked VM terminated without properly saying goodbye. VM crash or
System.exit called?
[INFO] [ERROR] Command was cmd.exe /X /C
"c:\PROGRA~1\Java\JDK18~1.0_4\jre\bin\java -jar
"C:\Users\Gale\ApacheTavernaBuilds\04 Try Engine
again\incubator-taverna-engine-master\taverna-activity-archetype\target\test-classes\projects\dummyActivity\project\dummy-taverna-plugin\dummy-taverna-plugin-activity\target\surefire\surefirebooter7662048493632791084.jar"
"C:\Users\Gale\ApacheTavernaBuilds\04 Try Engine
again\incubator-taverna-engine-master\taverna-activity-archetype\target\test-classes\projects\dummyActivity\project\dummy-taverna-plugin\dummy-taverna-plugin-activity\target\surefire\surefire2131732548318184089tmp"
"C:\Users\Gale\ApacheTavernaBuilds\04 Try Engine
again\incubator-taverna-engine-master\taverna-activity-archetype\target\test-classes\projects\dummyActivity\project\dummy-taverna-plugin\dummy-taverna-plugin-activity\target\surefire\surefire_07668064436317001826tmp""
[INFO] [ERROR] -> [Help 1]
[INFO] org.apache.maven.lifecycle.LifecycleExecutionException: Failed to
execute goal org.apache.maven.plugins:maven-surefire-plugin:2.19.1:test
(default-test) on project dummy-taverna-plugin-activity: Execution
default-test of goal
org.apache.maven.plugins:maven-surefire-plugin:2.19.1:test failed: The
forked VM terminated without properly saying goodbye. VM crash or
System.exit called?
[INFO] Command was cmd.exe /X /C "c:\PROGRA~1\Java\JDK18~1.0_4\jre\bin\java
-jar "C:\Users\Gale\ApacheTavernaBuilds\04 Try Engine
again\incubator-taverna-engine-master\taverna-activity-archetype\target\test-classes\projects\dummyActivity\project\dummy-taverna-plugin\dummy-taverna-plugin-activity\target\surefire\surefirebooter7662048493632791084.jar"
"C:\Users\Gale\ApacheTavernaBuilds\04 Try Engine
again\incubator-taverna-engine-master\taverna-activity-archetype\target\test-classes\projects\dummyActivity\project\dummy-taverna-plugin\dummy-taverna-plugin-activity\target\surefire\surefire2131732548318184089tmp"
"C:\Users\Gale\ApacheTavernaBuilds\04 Try Engine
again\incubator-taverna-engine-master\taverna-activity-archetype\target\test-classes\projects\dummyActivity\project\dummy-taverna-plugin\dummy-taverna-plugin-activity\target\surefire\surefire_07668064436317001826tmp""
[INFO] at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:212)
[INFO] at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
[INFO] at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
[INFO] at
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:116)
[INFO] at
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:80)
[INFO] at
org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
[INFO] at
org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
[INFO] at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:307)
[INFO] at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:193)
[INFO] at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:106)
[INFO] at org.apache.maven.cli.MavenCli.execute(MavenCli.java:863)
[INFO] at org.apache.maven.cli.MavenCli.doMain(MavenCli.java:288)
[INFO] at org.apache.maven.cli.MavenCli.main(MavenCli.java:199)
[INFO] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
[INFO] at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
[INFO] at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
[INFO] at java.lang.reflect.Method.invoke(Method.java:497)
[INFO] at
org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
[INFO] at
org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
[INFO] at
org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode(Launcher.java:415)
[INFO] at
org.codehaus.plexus.classworlds.launcher.Launcher.main(Launcher.java:356)
[INFO] Caused by: org.apache.maven.plugin.PluginExecutionException:
Execution default-test of goal
org.apache.maven.plugins:maven-surefire-plugin:2.19.1:test failed: The
forked VM terminated without properly saying goodbye. VM crash or
System.exit called?
[INFO] Command was cmd.exe /X /C "c:\PROGRA~1\Java\JDK18~1.0_4\jre\bin\java
-jar "C:\Users\Gale\ApacheTavernaBuilds\04 Try Engine
again\incubator-taverna-engine-master\taverna-activity-archetype\target\test-classes\projects\dummyActivity\project\dummy-taverna-plugin\dummy-taverna-plugin-activity\target\surefire\surefirebooter7662048493632791084.jar"
"C:\Users\Gale\ApacheTavernaBuilds\04 Try Engine
again\incubator-taverna-engine-master\taverna-activity-archetype\target\test-classes\projects\dummyActivity\project\dummy-taverna-plugin\dummy-taverna-plugin-activity\target\surefire\surefire2131732548318184089tmp"
"C:\Users\Gale\ApacheTavernaBuilds\04 Try Engine
again\incubator-taverna-engine-master\taverna-activity-archetype\target\test-classes\projects\dummyActivity\project\dummy-taverna-plugin\dummy-taverna-plugin-activity\target\surefire\surefire_07668064436317001826tmp""
[INFO] at
org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:145)
[INFO] at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:207)
[INFO] ... 20 more
[INFO] Caused by: java.lang.RuntimeException: The forked VM terminated
without properly saying goodbye. VM crash or System.exit called?
[INFO] Command was cmd.exe /X /C "c:\PROGRA~1\Java\JDK18~1.0_4\jre\bin\java
-jar "C:\Users\Gale\ApacheTavernaBuilds\04 Try Engine
again\incubator-taverna-engine-master\taverna-activity-archetype\target\test-classes\projects\dummyActivity\project\dummy-taverna-plugin\dummy-taverna-plugin-activity\target\surefire\surefirebooter7662048493632791084.jar"
"C:\Users\Gale\ApacheTavernaBuilds\04 Try Engine
again\incubator-taverna-engine-master\taverna-activity-archetype\target\test-classes\projects\dummyActivity\project\dummy-taverna-plugin\dummy-taverna-plugin-activity\target\surefire\surefire2131732548318184089tmp"
"C:\Users\Gale\ApacheTavernaBuilds\04 Try Engine
again\incubator-taverna-engine-master\taverna-activity-archetype\target\test-classes\projects\dummyActivity\project\dummy-taverna-plugin\dummy-taverna-plugin-activity\target\surefire\surefire_07668064436317001826tmp""
[INFO] at
org.apache.maven.plugin.surefire.booterclient.ForkStarter.fork(ForkStarter.java:590)
[INFO] at
org.apache.maven.plugin.surefire.booterclient.ForkStarter.fork(ForkStarter.java:460)
[INFO] at
org.apache.maven.plugin.surefire.booterclient.ForkStarter.run(ForkStarter.java:229)
[INFO] at
org.apache.maven.plugin.surefire.booterclient.ForkStarter.run(ForkStarter.java:201)
[INFO] at
org.apache.maven.plugin.surefire.AbstractSurefireMojo.executeProvider(AbstractSurefireMojo.java:1026)
[INFO] at
org.apache.maven.plugin.surefire.AbstractSurefireMojo.executeAfterPreconditionsChecked(AbstractSurefireMojo.java:862)
[INFO] at
org.apache.maven.plugin.surefire.AbstractSurefireMojo.execute(AbstractSurefireMojo.java:755)
[INFO] at
org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
[INFO] ... 21 more
[INFO] [ERROR]
[INFO] [ERROR] Re-run Maven using the -X switch to enable full debug
logging.
[INFO] [ERROR]
[INFO] [ERROR] For more information about the errors and possible
solutions, please read the following articles:
[INFO] [ERROR] [Help 1]
http://cwiki.apache.org/confluence/display/MAVEN/PluginExecutionException
[INFO] [ERROR]
[INFO] [ERROR] After correcting the problems, you can resume the build with
the command
[INFO] [ERROR]   mvn <goals> -rf :dummy-taverna-plugin-activity
[INFO] Post-archetype-generation invoker exit code: 1
[INFO]
------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO]
[INFO] Apache Taverna Engine and Platform ................. SUCCESS [
 3.095 s]
[INFO] Apache Taverna Activity archetype .................. FAILURE [
46.310 s]
[INFO] Apache Taverna Reference Manager API ............... SKIPPED
[INFO] Apache Taverna Observer pattern .................... SKIPPED
[INFO] Apache Taverna Workflow Model API .................. SKIPPED
[INFO] Apache Taverna Workflow Model Extension Points ..... SKIPPED
[INFO] Apache Taverna Workflow Model impl ................. SKIPPED
[INFO] Apache Taverna Database Configuration API .......... SKIPPED
[INFO] Apache Taverna Reference Test Helpers .............. SKIPPED
[INFO] Apache Taverna Reference Manager impl .............. SKIPPED
[INFO] Apache Taverna Engine Reference Types .............. SKIPPED
[INFO] Apache Taverna Activity test utils ................. SKIPPED
[INFO] Apache Taverna Platform Capability API ............. SKIPPED
[INFO] Apache Taverna Platform Capability impl ............ SKIPPED
[INFO] Apache Taverna Credential Manager API .............. SKIPPED
[INFO] Apache Taverna Credential Manager impl ............. SKIPPED
[INFO] Apache Taverna Database Configuration impl ......... SKIPPED
[INFO] Apache Taverna Dataflow Activity ................... SKIPPED
[INFO] Apache Taverna Platform Report Service ............. SKIPPED
[INFO] Apache Taverna Platform Execution Service API ...... SKIPPED
[INFO] Apache Taverna Hadoop Workflow Execution Service ... SKIPPED
[INFO] Apache Taverna Platform Execution Service impl ..... SKIPPED
[INFO] Apache Taverna Platform Local Execution Service .... SKIPPED
[INFO] Apache Taverna Platform Remote Execution Service ... SKIPPED
[INFO] Apache Taverna Platform Run Service API ............ SKIPPED
[INFO] Apache Taverna Platform Run Service impl ........... SKIPPED
[INFO] Apache Taverna Services API ........................ SKIPPED
[INFO] Apache Taverna Platform Services impl .............. SKIPPED
[INFO] Apache Taverna StringConstant Activity ............. SKIPPED
[INFO]
------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO]
------------------------------------------------------------------------
[INFO] Total time: 51.317 s
[INFO] Finished at: 2016-05-23T06:51:36-07:00
[INFO] Final Memory: 41M/439M
[INFO]
------------------------------------------------------------------------
[ERROR] Failed to execute goal
org.apache.maven.plugins:maven-archetype-plugin:2.4:integration-test
(default-integration-test) on project taverna-activity-archetype:
[ERROR] Archetype IT 'dummyActivity' failed: Execution failure: exit code =
1
[ERROR] -> [Help 1]
org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute
goal org.apache.maven.plugins:maven-archetype-plugin:2.4:integration-test
(default-integration-test) on project taverna-activity-archetype:
Archetype IT 'dummyActivity' failed: Execution failure: exit code = 1
at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:212)
at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
at
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:116)
at
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:80)
at
org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51)
at
org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:307)
at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:193)
at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:106)
at org.apache.maven.cli.MavenCli.execute(MavenCli.java:863)
at org.apache.maven.cli.MavenCli.doMain(MavenCli.java:288)
at org.apache.maven.cli.MavenCli.main(MavenCli.java:199)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at
org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289)
at
org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229)
at
org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode(Launcher.java:415)
at org.codehaus.plexus.classworlds.launcher.Launcher.main(Launcher.java:356)
Caused by: org.apache.maven.plugin.MojoExecutionException:
Archetype IT 'dummyActivity' failed: Execution failure: exit code = 1
at
org.apache.maven.archetype.mojos.IntegrationTestMojo.execute(IntegrationTestMojo.java:269)
at
org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134)
at
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:207)
... 20 more
[ERROR]
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions,
please read the following articles:
[ERROR] [Help 1]
http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException
[ERROR]
[ERROR] After correcting the problems, you can resume the build with the
command
[ERROR]   mvn <goals> -rf :taverna-activity-archetype


On Mon, May 23, 2016 at 6:47 AM Gale Naylor <GaleN@noventussolutions.com>
wrote:

> Yes, sorry - I'm at a conference and didn't check email yesterday. FYI I'm
> running mvn 3.3.9. I'll try it again.
>
> On Sun, May 22, 2016 at 10:39 AM Stian Soiland-Reyes <stain@apache.org>
> wrote:
>
>> I added the explicit plugin dependency as described in ARCHETYPE-488 -
>> could you see if it works now on your setup, Gale?
>>
>> On 22 May 2016 at 19:35, Stian Soiland-Reyes <stain@apache.org> wrote:
>> > On 22 May 2016 at 19:32, Stian Soiland-Reyes <stain@apache.org> wrote:
>> >
>> >> We can try to add that workaround - I upgraded it to the newer
>> >> maven-archetype-plugin 2.5 now - is the problem still there?
>> >
>> > Sorry, archetype-plugin 2.5 was not released yet  - so that didn't
>> work. :(
>> >
>> >
>> > I'll see if some other workaround can be added.. or we can just
>> > disable that test on Windows.
>> >
>> > (I think it's something to do with mvn.cmd vs. mvn.bat ?)
>> >
>> >
>> > --
>> > Stian Soiland-Reyes
>> > Apache Commons, Apache Taverna (incubating), Apache Commons RDF
>> (incubating)
>> > http://orcid.org/0000-0001-9842-9718
>>
>>
>>
>> --
>> Stian Soiland-Reyes
>> Apache Commons, Apache Taverna (incubating), Apache Commons RDF
>> (incubating)
>> http://orcid.org/0000-0001-9842-9718
>>
>

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