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From "Stian Soiland-Reyes (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (TAVERNA-880) Browse+use CWL tool descriptions
Date Fri, 11 Mar 2016 10:28:40 GMT

    [ https://issues.apache.org/jira/browse/TAVERNA-880?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15190770#comment-15190770
] 

Stian Soiland-Reyes commented on TAVERNA-880:
---------------------------------------------

A good small registry to start with is the https://github.com/common-workflow-language/workflows
examples - there's also a SPARQL endpoint, but it's probably easiest to start with a git clone
and just iterate through that tools/ folder

> Browse+use CWL tool descriptions
> --------------------------------
>
>                 Key: TAVERNA-880
>                 URL: https://issues.apache.org/jira/browse/TAVERNA-880
>             Project: Apache Taverna
>          Issue Type: New Feature
>          Components: Taverna Workbench Common Activities
>            Reporter: Stian Soiland-Reyes
>              Labels: cwl
>
> CWL Tool descriptions may be used by the ELIXIR Tool registry, using EDAM ontology.
> The Taverna Workbench could parse such descriptions to add Tool Activities to workflows.
> The Available Services panel is pluggable - see 
> https://github.com/apache/incubator-taverna-workbench/blob/master/taverna-activity-palette-api/src/main/java/org/apache/taverna/servicedescriptions/ServiceDescriptionProvider.java
> and
> https://github.com/apache/incubator-taverna-workbench/blob/master/taverna-activity-palette-api/src/main/java/org/apache/taverna/servicedescriptions/ServiceDescription.java



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