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From Alan Williams <alanin...@googlemail.com>
Subject Re: Problem on Taverna Plugin Installation
Date Wed, 10 Feb 2016 09:16:09 GMT



-------- Forwarded Message --------
Subject: Re: Problem on Taverna Plugin Installation
Date: Tue, 09 Feb 2016 21:46:13 +0200
From: PARASKEVOPOULOU MARIA <mparaskevopoulou@uth.gr>
To: alaninmcr <alaninmcr@googlemail.com>

Hi Ian,

For Taverna v2.5. in order to install the plugin, the following plugin
site should be added :
http://192.185.115.65/~diana/DIANA_plugin_updated/test-plugins/. You
can also see the relevant information on our site
http://diana.imis.athena-innovation.gr/DianaTools/index.php?r=site/help&topic=taverna.

Thank you in advance for your support.

Best regards,
Maria

Quoting alaninmcr <alaninmcr@googlemail.com>:

> -------- Forwarded Message --------
> Subject: Re: Problem on Taverna Plugin Installation
> Date: Tue, 9 Feb 2016 13:57:08 +0000
> From: Ian Dunlop <ian.dunlop@manchester.ac.uk>
> Reply-To: dev@taverna.incubator.apache.org
> To: dev@taverna.incubator.apache.org
>
> Hello,
>
> What does the plugins.xml say eg
> /home/johndoe/.taverna-core-2.5.0/plugins.xml. Maybe taverna can't find
> your server for some reason.
>
> Where is your plugin deployed ie the info you put in when adding a new
> plugin site? We could then try and install it and see if we get the same
> result.
>
> Cheers,
>
> Ian
>
> On 08/02/2016 18:52, PARASKEVOPOULOU MARIA wrote:
>> Dear Taverna team,
>>
>> We have implemented a Taverna plugin incorporating services and
>> algorithms implemented in the DIANA LAB (www.microrna.gr).
>> The plugin initially worked for Taverna 2.3, while several months ago we
>> have updated the plugin and had it functional for both Taverna 2.3 and
>> 2.5 versions.
>>
>> However, the last month DIANA users complain that they cannot add the
>> DIANA Taverna plugin in their Taverna workbench.
>>
>> The installation has been performed several times in the past with success.
>> We uninstalled the plugin from our server and also observed a failure in
>> the reinstallation.
>> We redeployed the plugin but the error remains.
>>
>> The logs produced in Taverna, report a failure in fetching a Pom file.
>>
>>
>> "WARN  2015-07-22 19:34:34,036
>> (net.sf.taverna.raven.repository.impl.LocalRepository:85) - Could not
>> read com.example:DIANA_Services-activity-ui:1.2-SNAPSHOT from
>> http://www.mygrid.org.uk/maven/biomoby/biomoby.org/m2repo/
>> java.io.IOException: Server returned HTTP response code: 409 for URL:
>> http://repository.mygrid.org.uk/artifactory/biomoby/com/example/DIANA_Services-activity-ui/1.2-SNAPSHOT/DIANA_Services-activity-ui-1.2-SNAPSHOT.pom
>>
>> "
>> We assume that this failure is due to the fact that Taverna is not
>> trying to install/download the DIANA plugin from our server,defined in
>> the plugin's project pom.xml, but from http://repository.mygrid.org.uk.
>>
>> Did something change concerning the format of the project pom.xml that
>> is utilized for the plugin deployment?
>> Will the error be fixed, if we change the pom.xml? For the the pom.xml
>> design we followed a similar format as in the following pom file
>> https://github.com/taverna/taverna-prov/blob/master/pom.xml.
>>
>> It would be grateful if we could have your feedback on how to
>> troubleshoot the issue.
>>
>> Thank you in advance,
>>
>> DIANA Team
>>
>
> --
> Ian Dunlop, eScience Lab
> School of Computer Science
> The University of Manchester
> http://orcid.org/0000-0001-7066-3350






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