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From Gale Naylor <ga...@noventussolutions.com>
Subject Re: Taverna Language Command Line tool - convert command doc
Date Mon, 29 Jun 2015 16:40:57 GMT
Hi Menaka,

>I found this doc in
>http://dev.mygrid.org.uk/wiki/display/developer/SCUFL2+API

Thanks for the link. I also found this mygrid link:
http://dev.mygrid.org.uk/wiki/display/developer/Taverna+Workflow+Bundle,
which is very clear about the .wfbundle file extension.

I did notice the mygrid pages said the information was out of date.
So, I also looked at the taverna incubator documentation, and the
incubator SCUFL API page pointed me to a github page for the latest
information. I found the github SCUFL examples to be helpful:
https://github.com/apache/incubator-taverna-language/tree/master/taverna-scufl2-examples.
In the readme file, the t2flowtowfbundle tool describes the conversion
of a .t2flow file to a SCUFL2 .wfbundle.

Although I did find one example of a ".scufl2 bundle"
(http://dev.mygrid.org.uk/wiki/display/developer/2011-02+Scufl2+status
), most of the references indicate the correct file extension is
.wfbundle. So, I removed the .scufl2 references from my mapping table.
Please let me know if I missed something here.

I also updated the table to reflect the .wfbundle --> .json and
.wfbundle --> .iwir mappings.

Thanks!

Gale

On Sat, Jun 27, 2015 at 1:38 PM, Menaka Madushanka
<menaka12350@gmail.com> wrote:
> Hi Gale,
>
> So, .wfbundles can be converted to .json and .iwir formats as well as
>> .structure?
>
>
> Yes.
>
> Is it true that .wfbundle is the *bundle* format of Taverna 3
>> (taverna-sculf2-wfbundle)
>> and scufl2 is the *workflow* format of Taverna 3 (taverna-scufl2-api)?
>
>
> I found this doc in
> http://dev.mygrid.org.uk/wiki/display/developer/SCUFL2+API
>
>  Cheers
> Menaka
>
> On 27 June 2015 at 22:46, Gale Naylor <galen@noventussolutions.com> wrote:
>
>> Hi Menaka,
>>
>> > According to the documentations provided, SCUFL is an experimental
>> module.
>> > So It has not added to the tool yet.
>>
>> Okay, I see now. That makes sense. FYI, because I am a visual person,
>> I took the Taverna
>> Language Module information and created a diagram:
>>
>> https://galenaylor.wordpress.com/2015/06/27/apache-taverna-language-modules-diagram/
>>
>> > The taverna language is capable of converting .t2flow workflows into
>> > .wfbundle and other formats, and .wfbundles into formats except .t2flow.
>>
>> So, .wfbundles can be converted to .json and .iwir formats as well as
>> .structure?
>> If so, I will update my table.
>>
>> > (.t2flow is the format of Taverna 2 and .wfbundle is the format of
>> Taverna
>> > 3)
>>
>> Is it true that .wfbundle is the *bundle* format of Taverna 3
>> (taverna-sculf2-wfbundle)
>> and scufl2 is the *workflow* format of Taverna 3 (taverna-scufl2-api)?
>>
>> > Input file type detection was done to avoid any exceptions when reading
>> the
>> > wokflow file. ...
>> > In new_features2, I removed it because I have entered the wrong logic. I
>> > restored it.
>>
>> Okay, understood.
>>
>> Thank you!
>>
>> Gale
>>
>> On Fri, Jun 26, 2015 at 1:48 PM, Menaka Madushanka
>> <menaka12350@gmail.com> wrote:
>> > Hi Gale,
>> > According to the documentations provided, SCUFL is an experimental
>> module.
>> > So It has not added to the tool yet.
>> >
>> > I presumed that.scufl2 workflows could be converted to the same
>> >> formats as .t2flow workflows, but if that's not correct, let me know
>> >> and I'll fix it.
>> >
>> > The taverna language is capable of converting .t2flow workflows into
>> > .wfbundle and other formats, and .wfbundles into formats except .t2flow.
>> > (.t2flow is the format of Taverna 2 and .wfbundle is the format of
>> Taverna
>> > 3)
>> >
>> > Also, I was wondering about something you said in one of your June
>> >> 25th emails ([GitHub] incubator-taverna-language pull request: New
>> >> features2).
>> >> You said "File type detection removed."
>> >>
>> >> Which file type detection is this? Is this related to Stain's June 4th
>> >> email, in which he said the input format is auto-guessed by
>> >> WorkflowBundleIO? Just wondering, because in my blog I included this
>> >> comment and I wanted to make sure it is still accurate.
>> >
>> >
>> > Input file type detection was done to avoid any exceptions when reading
>> the
>> > wokflow file. The WorkflowBundleIO can guess the media type and read the
>> > bundle but, the input format could be wrongly entered by the user. We
>> can't
>> > promise that the user could always do the correct thing. Also in
>> recursive
>> > conversion, there could be other files also.
>> >
>> > In new_features2, I removed it because I have entered the wrong logic. I
>> > restored it.
>> >
>> > Thank you
>> > Menaka
>> >
>> >
>> >
>> > On 27 June 2015 at 01:54, Gale Naylor <galen@noventussolutions.com>
>> wrote:
>> >
>> >> Hi Menaka,
>> >>
>> >> A couple more things.
>> >>
>> >> I am trying to organize my understanding of how the conversions work,
>> >> so I wrote a new blog post with a conversion table:
>> >>
>> >>
>> https://galenaylor.wordpress.com/2015/06/26/apache-taverna-language-command-line-conversion-file-type-mapping/
>> >>
>> >> I presumed that.scufl2 workflows could be converted to the same
>> >> formats as .t2flow workflows, but if that's not correct, let me know
>> >> and I'll fix it. Should .scufl (Taverna 1) formats also be listed? The
>> >> table is my best guess from reading all of the emails, so please let
>> >> me know if anything is wrong, or if I missed something.
>> >>
>> >> Also, I was wondering about something you said in one of your June
>> >> 25th emails ([GitHub] incubator-taverna-language pull request: New
>> >> features2).
>> >> You said "File type detection removed."
>> >>
>> >> Which file type detection is this? Is this related to Stain's June 4th
>> >> email, in which he said the input format is auto-guessed by
>> >> WorkflowBundleIO? Just wondering, because in my blog I included this
>> >> comment and I wanted to make sure it is still accurate.
>> >>
>> >> Thanks!
>> >>
>> >> Gale
>> >>
>> >> On Fri, Jun 26, 2015 at 11:55 AM, Menaka Madushanka
>> >> <menaka12350@gmail.com> wrote:
>> >> > Have a nice weekend too.....!!! :-)
>> >> >
>> >> > On 27 June 2015 at 00:24, Menaka Madushanka <menaka12350@gmail.com>
>> >> wrote:
>> >> >
>> >> >> Hi Gale,
>> >> >> I'm really appreciate your feedback on my blogs. I'm very new and
>> there
>> >> >> could be some flows. Thank you very much for showing them. :-)
>> >> >>
>> >> >> 1) Yes, the types of bundle formats that can be converted are listed
>> in
>> >> >> this blog.
>> >> >>
>> >> >>
>> >>
>> https://menakamadushanka.wordpress.com/2015/06/20/taverna-language-command-line-tool-conversion-documentation-research-objects/
>> >> >> The bundles are not workflows.
>> >> >>
>> >> >> 2) No. It seems like the way I have wrote it somewhat misleading.....
>> >> >> Actually scufl2 workflows are not Bundles. Those are two different
>> APIs.
>> >> >> I'll update the blog. :-)
>> >> >>
>> >> >> 3).Yes, my mistake. Neither .t2flow nor wfbundle could be converted
>> into
>> >> >> robundle.
>> >> >>
>> >> >> 4). Yes Gale. That modification should be done. Other wise it looks
>> like
>> >> >> any format could be converted into Robundle. I'll update my blog
too.
>> >> >>
>> >> >> Are there any more facts that need clarification about the blogs
>> please
>> >> >> ask me. :)
>> >> >>
>> >> >> Thank you very much Gale.
>> >> >> Menaka
>> >> >>
>> >> >> On 27 June 2015 at 00:00, Gale Naylor <galen@noventussolutions.com>
>> >> wrote:
>> >> >>
>> >> >>> Hi Menaka,
>> >> >>>
>> >> >>> I've been reading and learning more about research objects,
and I
>> >> >>> think I understand better what is going on, but I still have
some
>> >> >>> questions.
>> >> >>>
>> >> >>> 1) I am curious as to which file types *can* be converted to
>> .robundle
>> >> >>> format? (I must have missed something because I thought .t2flow
and
>> >> >>> .wfbundle were the only allowed input file types.)
>> >> >>>
>> >> >>> 2) In rereading your June 18th blog post, I see you say that
the
>> >> >>> command line tool is for converting and managing workflow "bundles"
>> as
>> >> >>> well as research object bundles. Are t2flow files "workflow
bundles"
>> >> >>> or just "workflows?" Or is there not a practical difference?
>> >> >>>
>> >> >>> 3) I understand now that not all file format conversions are
valid.
>> >> >>> I'm trying to understand this better. In your June 18th blog
post
>> you
>> >> >>> say:
>> >> >>>
>> >> >>> "The conversion function supports converting .t2flow and .wfbundle
>> >> >>> formats into following formats:
>> >> >>>
>> >> >>>     .structure
>> >> >>>
>> >> >>>     .json
>> >> >>>
>> >> >>>     .iwir
>> >> >>>
>> >> >>>     .wfbundle
>> >> >>>
>> >> >>>     .wfdesc.ttl –> (development in progress)
>> >> >>>
>> >> >>>     .robundle –> (development in progress)"
>> >> >>>
>> >> >>> To me, reading this looks like all combinations are valid.
>> >> >>>
>> >> >>> I'm wondering, can both .t2flow and .wfbundle files be converted
to
>> >> >>> all file types *except* robundle?
>> >> >>>
>> >> >>>
>> >> >>> 4) I fixed the examples in my blog post.  Should I also change
the
>> >> >>> --robundle option description to say "Output bundle as .robundle"
>> >> >>> instead of "Output workflow as .robundle" ? (Same for .wfbundle
>> >> >>> option.)
>> >> >>>
>> >> >>> Thanks for the feedback and the correct link to the example!
>> >> >>>
>> >> >>> Have a nice weekend.
>> >> >>>
>> >> >>> Gale
>> >> >>>
>> >> >>>
>> >> >>>
>> >> >>> On Wed, Jun 24, 2015 at 10:52 PM, Menaka Madushanka
>> >> >>> <menaka12350@gmail.com> wrote:
>> >> >>> > Hi Gale,
>> >> >>> > Use this link
>> >> >>> >
>> >> >>>
>> >>
>> https://github.com/apache/incubator-taverna-language/blob/master/taverna-robundle/src/test/java/org/apache/taverna/robundle/TestExample.java
>> >> >>> >
>> >> >>> > Cheers
>> >> >>> > Menaka
>> >> >>> >
>> >> >>> > On 25 June 2015 at 05:34, Gale Naylor <
>> galen@noventussolutions.com>
>> >> >>> wrote:
>> >> >>> >
>> >> >>> >> Hi Menaka,
>> >> >>> >>
>> >> >>> >> Thank you for the feedback and clarifying information.
Sorry not
>> to
>> >> >>> respond
>> >> >>> >> sooner. I am learning about bundles, etc. and reading
the link
>> you
>> >> >>> sent.
>> >> >>> >>
>> >> >>> >> One thing, I'm having trouble getting to the example
in the
>> Examples
>> >> >>> of Use
>> >> >>> >> Section: "Example in full is at
>> >> >>> org.apache.taverna.robundle.TestExample"
>> >> >>> >>
>> >> >>> >> Can you help me? This is what I've done so far:
>> >> >>> >>
>> >> >>> >> - Clicking on the link gets me the "This is not the
web page you
>> are
>> >> >>> >> looking
>> >> >>> >> for" page. (This is the actual link address:
>> >> >>> >>
>> >> >>> >>
>> >> >>>
>> >>
>> https://github.com/apache/incubator-taverna-language/blob/master/taverna-robundle/src/test/java/org/purl/wf4ever/robundle/TestExample.java
>> >> >>> >> )
>> >> >>> >>
>> >> >>> >> - Entering "org.apache.taverna.robundle.TestExample"
also doesn't
>> >> work
>> >> >>> for
>> >> >>> >> me. I didn't think it would, but I tried anyway.
>> >> >>> >>
>> >> >>> >> - Searching for "taverna robundle TestExample" on
the main
>> >> Apache.com
>> >> >>> page
>> >> >>> >> yields no results.
>> >> >>> >>
>> >> >>> >> I will continue to read and understand the RO Bundle
API page,
>> but I
>> >> >>> would
>> >> >>> >> like to see the full Test Example, if possible.
>> >> >>> >>
>> >> >>> >> Thanks!
>> >> >>> >>
>> >> >>> >> Gale
>> >> >>> >>
>> >> >>> >>
>> >> >>> >> -----Original Message-----
>> >> >>> >> From: Menaka Madushanka [mailto:menaka12350@gmail.com]
>> >> >>> >> Sent: Saturday, June 20, 2015 11:09 AM
>> >> >>> >> To: dev@taverna.incubator.apache.org
>> >> >>> >> Subject: Re: Taverna Language Command Line tool -
convert command
>> >> doc
>> >> >>> >>
>> >> >>> >> That's cool.....!! :-)
>> >> >>> >> Correction:
>> >> >>> >>
>> >> >>> >>
>> >> >>>
>> >>
>> https://galenaylor.wordpress.com/2015/06/19/apache-taverna-language-command-line-convert-examples/
>> >> >>> >>
>> >> >>> >> > Example 2: Simple conversion, multiple input
files, no options
>> >> >>> >> >
>> >> >>> >> > $tavlang convert –-robundle /someFile1.wfbundle
>> >> /someFile2.wfbundle
>> >> >>> >> >
>> >> >>> >> > Converts */someFile1.wfbundle* and */someFile2.wfbundle*
into
>> >> >>> >> > *.robundle* format and saves the output files
to the
>> */converted*
>> >> >>> >> > folder in the current working directory.
>> >> >>> >> >
>> >> >>> >> Taverna language *cannot* convert .wfbundles/.t2flow
into
>> robundle
>> >> >>> format.
>> >> >>> >> Its only for some specific bundle formats. Go through
this doc
>> for
>> >> more
>> >> >>> >> info.
>> >> >>> >>
>> >> >>> >>
>> >> >>> >>
>> >> >>>
>> >>
>> https://github.com/apache/incubator-taverna-language/tree/master/taverna-robundle
>> >> >>> >>
>> >> >>> >> cheers.
>> >> >>> >>
>> >> >>> >> On 20 June 2015 at 22:43, Gale Naylor <
>> galen@noventussolutions.com>
>> >> >>> wrote:
>> >> >>> >>
>> >> >>> >> > Thank you for the Wordpress tip, Menaka! I have
changed the two
>> >> blog
>> >> >>> >> > posts to use the <pre> tag, and it looks
great. I also made a
>> few
>> >> >>> >> > refinements.
>> >> >>> >> >
>> >> >>> >> > Thanks,
>> >> >>> >> > Gale
>> >> >>> >> >
>> >> >>> >> > On Fri, Jun 19, 2015 at 11:54 PM, Menaka Madushanka
>> >> >>> >> > <menaka12350@gmail.com> wrote:
>> >> >>> >> > > Thank you very much Gale,
>> >> >>> >> > >
>> >> >>> >> > > I showed the output-format without brackets
to indicate it is
>> >> >>> >> > >> required and not optional because it
appears to be always
>> >> >>> necessary
>> >> >>> >> > >
>> >> >>> >> > >
>> >> >>> >> > > That would be more accurate I think. I'm
very new for
>> >> >>> documentation.
>> >> >>> >> > Thank
>> >> >>> >> > > you very much.
>> >> >>> >> > >
>> >> >>> >> > >  I left the -json output file type as having
a single dash,
>> but
>> >> all
>> >> >>> >> > >> the other output types have double-dashes.
Should I change
>> the
>> >> >>> json
>> >> >>> >> > >> output argument to --json?
>> >> >>> >> > >>
>> >> >>> >> > > -json should be --json. In my email that
was a mistake. So
>> you
>> >> can
>> >> >>> >> > > use
>> >> >>> >> > --.
>> >> >>> >> > >
>> >> >>> >> > > (Wordpress is driving me crazy because it
is showing the
>> >> >>> >> > > double-dashes
>> >> >>> >> > >> as long single dashes, even when I use
the monospace
>> >> font-family.
>> >> >>> >> > >> Any
>> >> >>> >> > >> suggestions?)
>> >> >>> >> > >>
>> >> >>> >> > >
>> >> >>> >> > > Yes, wordpress does what it wants, but not
us. :-) Use
>> >> >>> preformatted.
>> >> >>> >> > > Not paragraph. Then it would be ok. I updated
my blog.
>> >> >>> >> > >
>> >> >>> >> >
>> >> >>>
>> https://menakamadushanka.wordpress.com/2015/06/18/apache-taverna-langu
>> >> >>> >> > age-command-line-conversion-documentation/
>> >> >>> >> > >
>> >> >>> >> > > Thank you very much.
>> >> >>> >> > > Menaka
>> >> >>> >> > >
>> >> >>> >> > > I'll go through your documentations.
>> >> >>> >> > >
>> >> >>> >> > >
>> >> >>> >> > > On 20 June 2015 at 03:43, Gale Naylor <
>> >> galen@noventussolutions.com
>> >> >>> >
>> >> >>> >> > wrote:
>> >> >>> >> > >
>> >> >>> >> > >> Hi Menaka,
>> >> >>> >> > >>
>> >> >>> >> > >> Thanks for updating your blog! I have
some additional
>> feedback
>> >> in
>> >> >>> >> > >> the form of two blog posts. One has
a detailed description
>> (as
>> >> I
>> >> >>> >> > >> understand it) of the convert command
and one has several
>> >> >>> examples,
>> >> >>> >> > >> building on the examples in your blog.
I hope these will
>> help
>> >> the
>> >> >>> >> > >> discussion of the command structure.
Here are the links:
>> >> >>> >> > >>
>> >> >>> >> > >>
>> >> >>> >> > >>
>> >> >>> >> >
>> >> >>>
>> https://galenaylor.wordpress.com/2015/06/19/apache-taverna-language-co
>> >> >>> >> > mmand-line-convert-command/
>> >> >>> >> > >>
>> >> >>> >> > >>
>> >> >>> >> > >>
>> >> >>> >> >
>> >> >>>
>> https://galenaylor.wordpress.com/2015/06/19/apache-taverna-language-co
>> >> >>> >> > mmand-line-convert-examples/
>> >> >>> >> > >>
>> >> >>> >> > >> Some things to note:
>> >> >>> >> > >>
>> >> >>> >> > >> (1) l basically used your June 18th
post, but a few things
>> >> (like
>> >> >>> >> > >> the validate command) are from earlier
posts/emails.
>> >> >>> >> > >>
>> >> >>> >> > >> (2) I showed the output-format without
brackets to indicate
>> it
>> >> is
>> >> >>> >> > >> required and not optional because it
appears to be always
>> >> >>> necessary.
>> >> >>> >> > >>
>> >> >>> >> > >> (3) The way I understand the overall
command structure, it
>> >> seemed
>> >> >>> >> > >> that all options (e.g., the output file
directory) should
>> come
>> >> >>> >> > >> before the input-file-list, so that's
what I assumed.
>> >> >>> >> > >>
>> >> >>> >> > >> (4) I left the -json output file type
as having a single
>> dash,
>> >> but
>> >> >>> >> > >> all the other output types have double-dashes.
Should I
>> change
>> >> the
>> >> >>> >> > >> json output argument to --json?
>> >> >>> >> > >>
>> >> >>> >> > >> Please let me know if anything is incorrect
and I will
>> change
>> >> it.
>> >> >>> I
>> >> >>> >> > >> realize the command structure is fluid,
and I'm happy to
>> make
>> >> any
>> >> >>> >> > >> changes as things evolve.
>> >> >>> >> > >>
>> >> >>> >> > >> (Wordpress is driving me crazy because
it is showing the
>> >> >>> >> > >> double-dashes as long single dashes,
even when I use the
>> >> monospace
>> >> >>> >> > >> font-family. Any
>> >> >>> >> > >> suggestions?)
>> >> >>> >> > >>
>> >> >>> >> > >> Thanks,
>> >> >>> >> > >>
>> >> >>> >> > >> Gale
>> >> >>> >> > >>
>> >> >>> >> > >> On Fri, Jun 19, 2015 at 10:11 AM, Menaka
Madushanka
>> >> >>> >> > >> <menaka12350@gmail.com> wrote:
>> >> >>> >> > >> > Hi Gale,
>> >> >>> >> > >> >
>> >> >>> >> > >> > Thank you very much.
>> >> >>> >> > >> >
>> >> >>> >> > >> > . Can you help me
>> >> >>> >> > >> >> understand what you mean when
you say the files will get
>> >> saved
>> >> >>> >> > >> >> to the C directory?
>> >> >>> >> > >> >
>> >> >>> >> > >> > That was a mistake :-). I updated
the blog. That should be
>> >> >>> >> > >> > corrected
>> >> >>> >> > as
>> >> >>> >> > >> > *$tavlang convert –json -r -i
/home/usrname/toConvert/  –>
>> >> >>> >> > >> > *Convert
>> >> >>> >> > the
>> >> >>> >> > >> > files and save them in the …/toConvert/converted/
>> directory.
>> >> >>> >> > >> >
>> >> >>> >> > >> > I would appreciate more feedback,
modifications etc. So
>> with
>> >> the
>> >> >>> >> > >> > help
>> >> >>> >> > of
>> >> >>> >> > >> > the community we could come up
with a much better
>> structure.
>> >> >>> >> > >> > Cheers
>> >> >>> >> > >> > Menaka
>> >> >>> >> > >> >
>> >> >>> >> > >> > On 19 June 2015 at 22:32, Gale
Naylor
>> >> >>> >> > >> > <galen@noventussolutions.com>
>> >> >>> >> > >> wrote:
>> >> >>> >> > >> >
>> >> >>> >> > >> >> Hi Menaka,
>> >> >>> >> > >> >>
>> >> >>> >> > >> >> I am very happy to help, and
I understand the command
>> >> structure
>> >> >>> >> > >> >> is a little fluid right now.
Thank you for the blog
>> post; it
>> >> >>> was
>> >> >>> >> > >> >> very helpful.
>> >> >>> >> > >> >>
>> >> >>> >> > >> >> I am a little confused about
your recursive example. Can
>> you
>> >> >>> >> > >> >> help me understand what you
mean when you say the files
>> will
>> >> >>> get
>> >> >>> >> > >> >> saved to the C directory? Because
you show the output
>> being
>> >> >>> saved
>> >> >>> >> > >> >> to:
>> >> >>> >> > >> >> /home/usrname/toConvert/converted/somefile1.json
>> >> >>> >> > >> >>
>> >> >>> >> > >> >> This is the example:
>> >> >>> >> > >> >> $tavlang convert –json -r
-i /home/usrname/toConvert/  –>
>> >> >>> >> > >> >> Convert the files and save
them in the C directory.
>> >> >>> >> > >> >>
>> >> >>> >> > >> >> Thank you!
>> >> >>> >> > >> >>
>> >> >>> >> > >> >> Gale
>> >> >>> >> > >> >>
>> >> >>> >> > >> >> B
>> >> >>> >> > >> >>
>> >> >>> >> > >> >> On Fri, Jun 19, 2015 at 2:15
AM, Menaka Madushanka
>> >> >>> >> > >> >> <menaka12350@gmail.com>
wrote:
>> >> >>> >> > >> >> > Hi Gale,
>> >> >>> >> > >> >> > I extremely appreciate
your help. Thank you very much.
>> :-)
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >> > 1) Is this still the basic
structure of the command:
>> >> tavlang
>> >> >>> >> > convert
>> >> >>> >> > >> >> >> [options] <output
format> <input files>? Am I wrong in
>> >> >>> >> > >> >> >> thinking
>> >> >>> >> > that
>> >> >>> >> > >> the
>> >> >>> >> > >> >> >> output formats are
handled as options?
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >> > Yes there is a little
difference in the structure of
>> >> commands
>> >> >>> >> > >> >> > now
>> >> >>> >> > and
>> >> >>> >> > >> >> then.
>> >> >>> >> > >> >> > So for the moment the
command structure is like this.
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >> > $tavlang convert [--out-put
format] [options]
>> [arguments]
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >> > 2) Are -r and -i ever
used independently? If so, under
>> >> what
>> >> >>> >> > >> >> circumstances?
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >> > No. In recursive case
the input will be a directory
>> >> >>> containing
>> >> >>> >> > >> .t2flow of
>> >> >>> >> > >> >> > .wfbundle files. The output
dir is optional for both
>> >> >>> recursive
>> >> >>> >> > >> >> > and
>> >> >>> >> > non
>> >> >>> >> > >> >> > recursive cases.
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >> > I created a blog about
the conversion command.
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >>
>> >> >>> >> > >>
>> >> >>> >> >
>> >> >>>
>> https://menakamadushanka.wordpress.com/2015/06/18/apache-taverna-langu
>> >> >>> >> > age-command-line-conversion-documentation/
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >> > If you have some suggestions,
please inform.
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >> > Thank you very much!
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >> > Regards
>> >> >>> >> > >> >> > Menaka
>> >> >>> >> > >> >> >
>> >> >>> >> > >> >> > --
>> >> >>> >> > >> >> > Menaka Madushanka Jayawardena
>> >> >>> >> > >> >> > Faculty of Engineering,
<http://www.pdn.ac.lk/eng>
>> >> >>> University
>> >> >>> >> > >> >> > of Peradeniyaya.
>> >> >>> >> > >> >> > LinkedIn <http://lk.linkedin.com/in/menakajayawardena>
>> >> >>> >> > >> >>
>> >> >>> >> > >> >
>> >> >>> >> > >> >
>> >> >>> >> > >> >
>> >> >>> >> > >> > --
>> >> >>> >> > >> > Menaka Madushanka Jayawardena
>> >> >>> >> > >> > Faculty of Engineering, <http://www.pdn.ac.lk/eng>
>> >> University
>> >> >>> of
>> >> >>> >> > >> > Peradeniyaya.
>> >> >>> >> > >> > LinkedIn <http://lk.linkedin.com/in/menakajayawardena>
>> >> >>> >> > >>
>> >> >>> >> > >
>> >> >>> >> > >
>> >> >>> >> > >
>> >> >>> >> > > --
>> >> >>> >> > > Menaka Madushanka Jayawardena
>> >> >>> >> > > Faculty of Engineering, <http://www.pdn.ac.lk/eng>
>> University
>> >> of
>> >> >>> >> > > Peradeniyaya.
>> >> >>> >> > > LinkedIn <http://lk.linkedin.com/in/menakajayawardena>
>> >> >>> >> >
>> >> >>> >>
>> >> >>> >>
>> >> >>> >>
>> >> >>> >> --
>> >> >>> >> Menaka Madushanka Jayawardena
>> >> >>> >> Faculty of Engineering, <http://www.pdn.ac.lk/eng>
University of
>> >> >>> >> Peradeniyaya.
>> >> >>> >> LinkedIn <http://lk.linkedin.com/in/menakajayawardena>
>> >> >>> >>
>> >> >>> >
>> >> >>> >
>> >> >>> >
>> >> >>> > --
>> >> >>> > Menaka Madushanka Jayawardena
>> >> >>> > Faculty of Engineering, <http://www.pdn.ac.lk/eng>
>> >> >>> > University of Peradeniyaya.
>> >> >>> > LinkedIn <http://lk.linkedin.com/in/menakajayawardena>
>> >> >>>
>> >> >>
>> >> >>
>> >> >>
>> >> >> --
>> >> >> Menaka Madushanka Jayawardena
>> >> >> Faculty of Engineering, <http://www.pdn.ac.lk/eng>
>> >> >> University of Peradeniyaya.
>> >> >> LinkedIn <http://lk.linkedin.com/in/menakajayawardena>
>> >> >>
>> >> >
>> >> >
>> >> >
>> >> > --
>> >> > Menaka Madushanka Jayawardena
>> >> > Faculty of Engineering, <http://www.pdn.ac.lk/eng>
>> >> > University of Peradeniyaya.
>> >> > LinkedIn <http://lk.linkedin.com/in/menakajayawardena>
>> >>
>> >
>> >
>> >
>> > --
>> > Menaka Madushanka Jayawardena
>> > Faculty of Engineering, <http://www.pdn.ac.lk/eng>
>> > University of Peradeniyaya.
>> > LinkedIn <http://lk.linkedin.com/in/menakajayawardena>
>>
>
>
>
> --
> Menaka Madushanka Jayawardena
> Faculty of Engineering, <http://www.pdn.ac.lk/eng>
> University of Peradeniyaya.
> LinkedIn <http://lk.linkedin.com/in/menakajayawardena>

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