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From jenk...@spark.tc
Subject Build failed in Jenkins: SystemML-DailyTest #1016
Date Sun, 28 May 2017 09:59:04 GMT
See <https://sparktc.ibmcloud.com/jenkins/job/SystemML-DailyTest/1016/changes>

Changes:

[Matthias Boehm] [MINOR] Cleanup parser data structures (unused kind/default fields)

[Matthias Boehm] [SYSTEMML-1592] Codegen cell/multiagg templates w/ sparse side inputs

------------------------------------------
[...truncated 30153 lines...]
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17/05/28 03:56:50 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 5)
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17/05/28 03:56:50 INFO scheduler.DAGScheduler: failed: Set()
17/05/28 03:56:50 INFO scheduler.DAGScheduler: Submitting ResultStage 5 (MapPartitionsRDD[11]
at mapValues at BinarySPInstruction.java:117), which has no missing parents
17/05/28 03:56:50 INFO memory.MemoryStore: Block broadcast_5 stored as values in memory (estimated
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17/05/28 03:56:50 INFO storage.BlockManagerInfo: Added broadcast_5_piece0 in memory on 169.54.146.43:56593
(size: 2.3 KB, free: 1033.8 MB)
17/05/28 03:56:50 INFO spark.SparkContext: Created broadcast 5 from broadcast at DAGScheduler.scala:996
17/05/28 03:56:50 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage
5 (MapPartitionsRDD[11] at mapValues at BinarySPInstruction.java:117)
17/05/28 03:56:50 INFO scheduler.TaskSchedulerImpl: Adding task set 5.0 with 1 tasks
17/05/28 03:56:50 INFO scheduler.FairSchedulableBuilder: Added task set TaskSet_5.0 tasks
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17/05/28 03:56:50 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 5.0 (TID 5, localhost,
executor driver, partition 0, PROCESS_LOCAL, 5814 bytes)
17/05/28 03:56:50 INFO executor.Executor: Running task 0.0 in stage 5.0 (TID 5)
17/05/28 03:56:50 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out
of 1 blocks
17/05/28 03:56:50 INFO storage.ShuffleBlockFetcherIterator: Started 0 remote fetches in 0
ms
17/05/28 03:56:50 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out
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17/05/28 03:56:50 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 5.0, whose tasks have
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17/05/28 03:56:50 INFO scheduler.DAGScheduler: ResultStage 5 (collect at SparkExecutionContext.java:789)
finished in 0.015 s
17/05/28 03:56:50 INFO storage.BlockManagerInfo: Removed broadcast_5_piece0 on 169.54.146.43:56593
in memory (size: 2.3 KB, free: 1033.8 MB)
17/05/28 03:56:50 INFO storage.BlockManagerInfo: Removed broadcast_4_piece0 on 169.54.146.43:56593
in memory (size: 1305.0 B, free: 1033.8 MB)
17/05/28 03:56:50 INFO spark.ContextCleaner: Cleaned shuffle 2
17/05/28 03:56:50 INFO spark.ContextCleaner: Cleaned shuffle 3
17/05/28 03:56:50 INFO storage.BlockManagerInfo: Removed broadcast_3_piece0 on 169.54.146.43:56593
in memory (size: 1305.0 B, free: 1033.8 MB)
17/05/28 03:58:54 INFO server.ServerConnector: Stopped ServerConnector@29d67a9e{HTTP/1.1}{0.0.0.0:4040}
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17/05/28 03:58:54 INFO handler.ContextHandler: Stopped o.s.j.s.ServletContextHandler@68a724d1{/storage/rdd/json,null,UNAVAILABLE}
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17/05/28 03:58:54 INFO ui.SparkUI: Stopped Spark web UI at http://169.54.146.43:4040
17/05/28 03:58:54 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint
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17/05/28 03:58:54 INFO memory.MemoryStore: MemoryStore cleared
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Running org.apache.sysml.test.integration.scripts.nn.NNTest
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 525.377 sec - in org.apache.sysml.test.integration.scripts.nn.NNTest
17/05/28 03:58:54 INFO util.ShutdownHookManager: Shutdown hook called
17/05/28 03:58:54 INFO util.ShutdownHookManager: Deleting directory /tmp/spark-edc6bd15-eb24-46f8-93aa-72ecdb2bfa3f
Running org.apache.sysml.test.integration.functions.quaternary.WeightedDivMatrixMultTest
Tests run: 90, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1,528.155 sec - in org.apache.sysml.test.integration.functions.quaternary.WeightedDivMatrixMultTest
17/05/28 03:59:46 INFO util.ShutdownHookManager: Shutdown hook called
17/05/28 03:59:46 INFO util.ShutdownHookManager: Deleting directory /tmp/spark-04be9dbf-403b-44ec-a4e0-daf44e767e39
Running org.apache.sysml.test.integration.applications.descriptivestats.UnivariateWeightedScaleDenseTest
Tests run: 24, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 350.721 sec - in org.apache.sysml.test.integration.applications.descriptivestats.UnivariateWeightedScaleDenseTest
Running org.apache.sysml.test.integration.functions.append.AppendChainTest
Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1,055.617 sec - in org.apache.sysml.test.integration.functions.append.AppendChainTest
Running org.apache.sysml.test.integration.applications.parfor.ParForNaiveBayesTest
Tests run: 10, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 532.727 sec - in org.apache.sysml.test.integration.applications.parfor.ParForNaiveBayesTest
Running org.apache.sysml.test.integration.applications.descriptivestats.UnivariateUnweightedScaleSparseTest
Tests run: 24, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 282.377 sec - in org.apache.sysml.test.integration.applications.descriptivestats.UnivariateUnweightedScaleSparseTest
Running org.apache.sysml.test.integration.applications.dml.HITSDMLTest
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 94.031 sec - in org.apache.sysml.test.integration.applications.dml.HITSDMLTest
Running org.apache.sysml.test.integration.applications.descriptivestats.UnivariateWeightedScaleSparseTest
Tests run: 24, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 336.654 sec - in org.apache.sysml.test.integration.applications.descriptivestats.UnivariateWeightedScaleSparseTest
Running org.apache.sysml.test.integration.functions.append.AppendMatrixTest
Tests run: 22, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1,440.386 sec - in org.apache.sysml.test.integration.functions.append.AppendMatrixTest
Running org.apache.sysml.test.integration.applications.pydml.ArimaPyDMLTest
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 50.135 sec - in org.apache.sysml.test.integration.applications.pydml.ArimaPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.HITSPyDMLTest
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 78.514 sec - in org.apache.sysml.test.integration.applications.pydml.HITSPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.LinearRegressionDMLTest
Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 50.448 sec - in org.apache.sysml.test.integration.applications.dml.LinearRegressionDMLTest
Running org.apache.sysml.test.integration.applications.pydml.CsplineDSPyDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 6.665 sec - in org.apache.sysml.test.integration.applications.pydml.CsplineDSPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.LinearLogRegPyDMLTest
Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 85.716 sec - in org.apache.sysml.test.integration.applications.pydml.LinearLogRegPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.NaiveBayesPyDMLTest
Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 81.726 sec - in org.apache.sysml.test.integration.applications.pydml.NaiveBayesPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.CsplineCGDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 16.497 sec - in org.apache.sysml.test.integration.applications.dml.CsplineCGDMLTest
Running org.apache.sysml.test.integration.applications.dml.L2SVMDMLTest
Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 63.862 sec - in org.apache.sysml.test.integration.applications.dml.L2SVMDMLTest
Running org.apache.sysml.test.integration.applications.pydml.MDABivariateStatsPyDMLTest
Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 298.22 sec - in org.apache.sysml.test.integration.applications.pydml.MDABivariateStatsPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.PageRankPyDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 8.472 sec - in org.apache.sysml.test.integration.applications.pydml.PageRankPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.NaiveBayesParforPyDMLTest
Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 82.457 sec - in org.apache.sysml.test.integration.applications.pydml.NaiveBayesParforPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.NaiveBayesDMLTest
Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 82.371 sec - in org.apache.sysml.test.integration.applications.dml.NaiveBayesDMLTest
Running org.apache.sysml.test.integration.applications.dml.MDABivariateStatsDMLTest
Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 296.672 sec - in org.apache.sysml.test.integration.applications.dml.MDABivariateStatsDMLTest
Running org.apache.sysml.test.integration.applications.dml.PageRankDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 8.386 sec - in org.apache.sysml.test.integration.applications.dml.PageRankDMLTest
Running org.apache.sysml.test.integration.applications.pydml.GLMPyDMLTest
Tests run: 30, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 588.505 sec - in org.apache.sysml.test.integration.applications.pydml.GLMPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.MultiClassSVMPyDMLTest
Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 87.962 sec - in org.apache.sysml.test.integration.applications.pydml.MultiClassSVMPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.ID3DMLTest
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 386.796 sec - in org.apache.sysml.test.integration.applications.dml.ID3DMLTest
Running org.apache.sysml.test.integration.applications.dml.GLMDMLTest
Tests run: 30, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 888.747 sec - in org.apache.sysml.test.integration.applications.dml.GLMDMLTest
Running org.apache.sysml.test.integration.applications.pydml.CsplineCGPyDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 6.164 sec - in org.apache.sysml.test.integration.applications.pydml.CsplineCGPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.WelchTPyDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 6.4 sec - in org.apache.sysml.test.integration.applications.pydml.WelchTPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.MultiClassSVMDMLTest
Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 88.923 sec - in org.apache.sysml.test.integration.applications.dml.MultiClassSVMDMLTest
Running org.apache.sysml.test.integration.applications.dml.CsplineDSDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 12.678 sec - in org.apache.sysml.test.integration.applications.dml.CsplineDSDMLTest
Running org.apache.sysml.test.integration.applications.pydml.ApplyTransformPyDMLTest
Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.815 sec - in org.apache.sysml.test.integration.applications.pydml.ApplyTransformPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.NaiveBayesParforDMLTest
Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 81.497 sec - in org.apache.sysml.test.integration.applications.dml.NaiveBayesParforDMLTest
Running org.apache.sysml.test.integration.applications.pydml.L2SVMPyDMLTest
Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 65.369 sec - in org.apache.sysml.test.integration.applications.pydml.L2SVMPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.LinearRegressionPyDMLTest
Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 52.216 sec - in org.apache.sysml.test.integration.applications.pydml.LinearRegressionPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.LinearLogRegDMLTest
Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 61.36 sec - in org.apache.sysml.test.integration.applications.dml.LinearLogRegDMLTest
Running org.apache.sysml.test.integration.applications.dml.GNMFDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 55.972 sec - in org.apache.sysml.test.integration.applications.dml.GNMFDMLTest
Running org.apache.sysml.test.integration.applications.dml.WelchTDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 6.389 sec - in org.apache.sysml.test.integration.applications.dml.WelchTDMLTest
Running org.apache.sysml.test.integration.applications.dml.ApplyTransformDMLTest
Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 14.022 sec - in org.apache.sysml.test.integration.applications.dml.ApplyTransformDMLTest
Running org.apache.sysml.test.integration.applications.pydml.ID3PyDMLTest
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 378.872 sec - in org.apache.sysml.test.integration.applications.pydml.ID3PyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.GNMFPyDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 56.215 sec - in org.apache.sysml.test.integration.applications.pydml.GNMFPyDMLTest

Results :

Failed tests: 
  ParForDataPartitionLeftIndexingTest.testParForDataPartitionLeftindexingRowSparseMR:103->runParForDataPartitionLeftindexingTest:157->AutomatedTestBase.runTest:1243
failed to run script ./src/test/scripts/functions/parfor/parfor_rdatapartition_leftindexing.dml
exception: org.apache.sysml.api.DMLException: org.apache.sysml.runtime.DMLRuntimeException:
org.apache.sysml.runtime.DMLRuntimeException: PARFOR: Failed to execute loop in parallel.
message: org.apache.sysml.runtime.DMLRuntimeException: org.apache.sysml.runtime.DMLRuntimeException:
PARFOR: Failed to execute loop in parallel.
stack trace:
>org.apache.sysml.api.DMLScript.executeScript(DMLScript.java:533)
>org.apache.sysml.api.DMLScript.main(DMLScript.java:233)
>org.apache.sysml.test.integration.AutomatedTestBase.runTest(AutomatedTestBase.java:1223)
>org.apache.sysml.test.integration.functions.parfor.ParForDataPartitionLeftIndexingTest.runParForDataPartitionLeftindexingTest(ParForDataPartitionLeftIndexingTest.java:157)
>org.apache.sysml.test.integration.functions.parfor.ParForDataPartitionLeftIndexingTest.testParForDataPartitionLeftindexingRowSparseMR(ParForDataPartitionLeftIndexingTest.java:103)
>sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
>sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>java.lang.reflect.Method.invoke(Method.java:497)
>org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:47)
>org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
>org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:44)
>org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17)
>org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:26)
>org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:27)
>org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:271)
>org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:70)
>org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
>org.junit.runners.ParentRunner$3.run(ParentRunner.java:238)
>org.apache.maven.surefire.junitcore.pc.Scheduler$1.run(Scheduler.java:318)
>org.apache.maven.surefire.junitcore.pc.InvokerStrategy.schedule(InvokerStrategy.java:41)
>org.apache.maven.surefire.junitcore.pc.Scheduler.schedule(Scheduler.java:274)
>org.junit.runners.ParentRunner.runChildren(ParentRunner.java:236)
>org.junit.runners.ParentRunner.access$000(ParentRunner.java:53)
>org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:229)
>org.junit.runners.ParentRunner.run(ParentRunner.java:309)
>org.junit.runners.Suite.runChild(Suite.java:127)
>org.junit.runners.Suite.runChild(Suite.java:26)
>org.junit.runners.ParentRunner$3.run(ParentRunner.java:238)
>org.apache.maven.surefire.junitcore.pc.Scheduler$1.run(Scheduler.java:318)
>org.apache.maven.surefire.junitcore.pc.InvokerStrategy.schedule(InvokerStrategy.java:41)
>org.apache.maven.surefire.junitcore.pc.Scheduler.schedule(Scheduler.java:274)
>org.junit.runners.ParentRunner.runChildren(ParentRunner.java:236)
>org.junit.runners.ParentRunner.access$000(ParentRunner.java:53)
>org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:229)
>org.junit.runners.ParentRunner.run(ParentRunner.java:309)
>org.junit.runners.Suite.runChild(Suite.java:127)
>org.junit.runners.Suite.runChild(Suite.java:26)
>org.junit.runners.ParentRunner$3.run(ParentRunner.java:238)
>org.apache.maven.surefire.junitcore.pc.Scheduler$1.run(Scheduler.java:318)
>org.apache.maven.surefire.junitcore.pc.InvokerStrategy.schedule(InvokerStrategy.java:41)
>org.apache.maven.surefire.junitcore.pc.Scheduler.schedule(Scheduler.java:274)
>org.junit.runners.ParentRunner.runChildren(ParentRunner.java:236)
>org.junit.runners.ParentRunner.access$000(ParentRunner.java:53)
>org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:229)
>org.junit.runners.ParentRunner.run(ParentRunner.java:309)
>org.apache.maven.surefire.junitcore.pc.ParallelComputerBuilder$PC$2.run(ParallelComputerBuilder.java:491)
>org.junit.runner.JUnitCore.run(JUnitCore.java:160)
>org.junit.runner.JUnitCore.run(JUnitCore.java:138)
>org.apache.maven.surefire.junitcore.JUnitCoreWrapper.createRequestAndRun(JUnitCoreWrapper.java:113)
>org.apache.maven.surefire.junitcore.JUnitCoreWrapper.executeEager(JUnitCoreWrapper.java:85)
>org.apache.maven.surefire.junitcore.JUnitCoreWrapper.execute(JUnitCoreWrapper.java:54)
>org.apache.maven.surefire.junitcore.JUnitCoreProvider.invoke(JUnitCoreProvider.java:134)
>org.apache.maven.surefire.booter.ForkedBooter.invokeProviderInSameClassLoader(ForkedBooter.java:200)
>org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:153)
>org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:103)

Tests run: 6967, Failures: 1, Errors: 0, Skipped: 0

[INFO] 
[INFO] --- maven-failsafe-plugin:2.17:verify (default) @ systemml ---
[INFO] Failsafe report directory: <https://sparktc.ibmcloud.com/jenkins/job/SystemML-DailyTest/ws/target/failsafe-reports>
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 02:26 h
[INFO] Finished at: 2017-05-28T04:59:03-05:00
[INFO] Final Memory: 63M/2594M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-failsafe-plugin:2.17:verify
(default) on project systemml: There are test failures.
[ERROR] 
[ERROR] Please refer to <https://sparktc.ibmcloud.com/jenkins/job/SystemML-DailyTest/ws/target/failsafe-reports>
for the individual test results.
[ERROR] -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following
articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
Build step 'Execute shell' marked build as failure
Run condition [Always] enabling perform for step [[]]

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