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From jenk...@spark.tc
Subject Build failed in Jenkins: SystemML-DailyTest #945
Date Sat, 22 Apr 2017 22:45:21 GMT
See <https://sparktc.ibmcloud.com/jenkins/job/SystemML-DailyTest/945/changes>

Changes:

[Nakul Jindal] [HOTFIX] for missing apache license in CSRPointer

------------------------------------------
[...truncated 28275 lines...]
17/04/22 16:37:40 INFO memory.MemoryStore: Block broadcast_258_piece0 stored as bytes in memory
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17/04/22 16:37:40 INFO spark.SparkContext: Created broadcast 258 from broadcast at DAGScheduler.scala:996
17/04/22 16:37:40 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ShuffleMapStage
258 (MapPartitionsRDD[721] at mapPartitionsToPair at RDDConverterUtils.java:262)
17/04/22 16:37:40 INFO scheduler.TaskSchedulerImpl: Adding task set 258.0 with 1 tasks
17/04/22 16:37:40 INFO scheduler.FairSchedulableBuilder: Added task set TaskSet_258.0 tasks
to pool default
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in memory (size: 1900.0 B, free: 1023.8 MB)
17/04/22 16:37:40 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 258.0 (TID 268,
localhost, executor driver, partition 0, PROCESS_LOCAL, 6289 bytes)
17/04/22 16:37:40 INFO executor.Executor: Running task 0.0 in stage 258.0 (TID 268)
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17/04/22 16:37:40 INFO spark.ContextCleaner: Cleaned accumulator 16842
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17/04/22 16:37:40 INFO executor.Executor: Finished task 0.0 in stage 258.0 (TID 268). 1804
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17/04/22 16:37:40 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 258.0, whose tasks have
all completed, from pool default
17/04/22 16:37:40 INFO scheduler.DAGScheduler: ShuffleMapStage 258 (mapPartitionsToPair at
RDDConverterUtils.java:262) finished in 0.013 s
17/04/22 16:37:40 INFO scheduler.DAGScheduler: looking for newly runnable stages
17/04/22 16:37:40 INFO scheduler.DAGScheduler: running: Set()
17/04/22 16:37:40 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 259)
17/04/22 16:37:40 INFO scheduler.DAGScheduler: failed: Set()
17/04/22 16:37:40 INFO scheduler.DAGScheduler: Submitting ResultStage 259 (MapPartitionsRDD[723]
at mapValues at SparkUtils.java:156), which has no missing parents
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17/04/22 16:37:40 INFO spark.SparkContext: Created broadcast 259 from broadcast at DAGScheduler.scala:996
17/04/22 16:37:40 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage
259 (MapPartitionsRDD[723] at mapValues at SparkUtils.java:156)
17/04/22 16:37:40 INFO scheduler.TaskSchedulerImpl: Adding task set 259.0 with 1 tasks
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17/04/22 16:37:40 INFO scheduler.DAGScheduler: ResultStage 259 (collect at SparkExecutionContext.java:796)
finished in 0.005 s
17/04/22 16:37:40 INFO scheduler.DAGScheduler: Registering RDD 725 (flatMapToPair at RDDConverterUtils.java:280)
17/04/22 16:37:40 INFO scheduler.DAGScheduler: Got job 193 (collectAsList at MLContextTest.java:1325)
with 1 output partitions
17/04/22 16:37:40 INFO scheduler.DAGScheduler: Final stage: ResultStage 261 (collectAsList
at MLContextTest.java:1325)
17/04/22 16:37:40 INFO scheduler.DAGScheduler: Parents of final stage: List(ShuffleMapStage
260)
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17/04/22 16:37:40 INFO scheduler.DAGScheduler: Submitting ShuffleMapStage 260 (MapPartitionsRDD[725]
at flatMapToPair at RDDConverterUtils.java:280), which has no missing parents
17/04/22 16:37:40 INFO memory.MemoryStore: Block broadcast_260 stored as values in memory
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17/04/22 16:37:40 INFO spark.SparkContext: Created broadcast 260 from broadcast at DAGScheduler.scala:996
17/04/22 16:37:40 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ShuffleMapStage
260 (MapPartitionsRDD[725] at flatMapToPair at RDDConverterUtils.java:280)
17/04/22 16:37:40 INFO scheduler.TaskSchedulerImpl: Adding task set 260.0 with 1 tasks
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localhost, executor driver, partition 0, PROCESS_LOCAL, 6218 bytes)
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17/04/22 16:37:40 INFO scheduler.DAGScheduler: ShuffleMapStage 260 (flatMapToPair at RDDConverterUtils.java:280)
finished in 0.006 s
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17/04/22 16:37:40 INFO scheduler.DAGScheduler: waiting: Set(ResultStage 261)
17/04/22 16:37:40 INFO scheduler.DAGScheduler: failed: Set()
17/04/22 16:37:40 INFO scheduler.DAGScheduler: Submitting ResultStage 261 (MapPartitionsRDD[731]
at collectAsList at MLContextTest.java:1325), which has no missing parents
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17/04/22 16:37:40 INFO spark.SparkContext: Created broadcast 261 from broadcast at DAGScheduler.scala:996
17/04/22 16:37:40 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage
261 (MapPartitionsRDD[731] at collectAsList at MLContextTest.java:1325)
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17/04/22 16:37:40 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 261.0 (TID 271,
localhost, executor driver, partition 0, ANY, 5783 bytes)
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17/04/22 16:37:40 INFO storage.ShuffleBlockFetcherIterator: Getting 1 non-empty blocks out
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ms
17/04/22 16:37:40 INFO executor.Executor: Finished task 0.0 in stage 261.0 (TID 271). 2024
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17/04/22 16:37:40 INFO scheduler.DAGScheduler: ResultStage 261 (collectAsList at MLContextTest.java:1325)
finished in 0.009 s
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17/04/22 16:37:40 INFO handler.ContextHandler: Stopped o.s.j.s.ServletContextHandler@70e4fe99{/stages/stage/json,null,UNAVAILABLE}
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17/04/22 16:37:40 INFO handler.ContextHandler: Stopped o.s.j.s.ServletContextHandler@5b99843f{/jobs/job/json,null,UNAVAILABLE}
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17/04/22 16:37:40 INFO handler.ContextHandler: Stopped o.s.j.s.ServletContextHandler@32dd08ac{/jobs,null,UNAVAILABLE}
17/04/22 16:37:40 INFO ui.SparkUI: Stopped Spark web UI at http://169.54.146.43:4040
17/04/22 16:37:40 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint
stopped!
17/04/22 16:37:40 INFO memory.MemoryStore: MemoryStore cleared
17/04/22 16:37:40 INFO storage.BlockManager: BlockManager stopped
17/04/22 16:37:40 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
17/04/22 16:37:40 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint:
OutputCommitCoordinator stopped!
17/04/22 16:37:40 INFO spark.SparkContext: Successfully stopped SparkContext
Running org.apache.sysml.test.integration.mlcontext.MLContextTest
Tests run: 177, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 10.874 sec - in org.apache.sysml.test.integration.mlcontext.MLContextTest
17/04/22 16:37:40 INFO util.ShutdownHookManager: Shutdown hook called
17/04/22 16:37:40 INFO util.ShutdownHookManager: Deleting directory /tmp/spark-54d2ca67-7b55-4a3e-b719-5891113e96d8
Running org.apache.sysml.test.integration.functions.quaternary.WeightedSigmoidTest
Tests run: 56, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 995.083 sec - in org.apache.sysml.test.integration.functions.quaternary.WeightedSigmoidTest
17/04/22 16:39:17 INFO util.ShutdownHookManager: Shutdown hook called
17/04/22 16:39:17 INFO util.ShutdownHookManager: Deleting directory /tmp/spark-5f0cb8b1-2949-4201-b02d-59d68a9eb99a
Running org.apache.sysml.test.integration.functions.append.AppendVectorTest
Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 414.575 sec - in org.apache.sysml.test.integration.functions.append.AppendVectorTest
Running org.apache.sysml.test.integration.functions.indexing.LeftIndexingTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 642.346 sec - in org.apache.sysml.test.integration.functions.indexing.LeftIndexingTest
Running org.apache.sysml.test.integration.applications.descriptivestats.UnivariateUnweightedScaleDenseTest
Tests run: 24, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 338.251 sec - in org.apache.sysml.test.integration.applications.descriptivestats.UnivariateUnweightedScaleDenseTest
Running org.apache.sysml.test.integration.applications.parfor.ParForCorrelationTest
Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 298.978 sec - in org.apache.sysml.test.integration.applications.parfor.ParForCorrelationTest
Running org.apache.sysml.test.integration.functions.reorg.FullOrderTest
Tests run: 132, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1,332.527 sec - in org.apache.sysml.test.integration.functions.reorg.FullOrderTest
Running org.apache.sysml.test.integration.applications.parfor.ParForCorrelationTestLarge
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 42.323 sec - in org.apache.sysml.test.integration.applications.parfor.ParForCorrelationTestLarge
Running org.apache.sysml.test.integration.functions.quaternary.WeightedDivMatrixMultTest
Tests run: 90, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1,483.647 sec - in org.apache.sysml.test.integration.functions.quaternary.WeightedDivMatrixMultTest
17/04/22 16:45:35 INFO util.ShutdownHookManager: Shutdown hook called
17/04/22 16:45:35 INFO util.ShutdownHookManager: Deleting directory /tmp/spark-87367954-6363-4afe-a8b4-95a1d005137b
Running org.apache.sysml.test.integration.applications.descriptivestats.UnivariateWeightedScaleDenseTest
Tests run: 24, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 351.839 sec - in org.apache.sysml.test.integration.applications.descriptivestats.UnivariateWeightedScaleDenseTest
Running org.apache.sysml.test.integration.functions.append.AppendChainTest
Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1,033.685 sec - in org.apache.sysml.test.integration.functions.append.AppendChainTest
Running org.apache.sysml.test.integration.applications.parfor.ParForNaiveBayesTest
Tests run: 10, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 540.822 sec - in org.apache.sysml.test.integration.applications.parfor.ParForNaiveBayesTest
Running org.apache.sysml.test.integration.applications.descriptivestats.UnivariateUnweightedScaleSparseTest
Tests run: 24, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 279.851 sec - in org.apache.sysml.test.integration.applications.descriptivestats.UnivariateUnweightedScaleSparseTest
Running org.apache.sysml.test.integration.applications.dml.HITSDMLTest
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 92.457 sec - in org.apache.sysml.test.integration.applications.dml.HITSDMLTest
Running org.apache.sysml.test.integration.functions.append.AppendMatrixTest
Tests run: 22, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1,415.704 sec - in org.apache.sysml.test.integration.functions.append.AppendMatrixTest
Running org.apache.sysml.test.integration.applications.descriptivestats.UnivariateWeightedScaleSparseTest
Tests run: 24, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 342.687 sec - in org.apache.sysml.test.integration.applications.descriptivestats.UnivariateWeightedScaleSparseTest
Running org.apache.sysml.test.integration.applications.pydml.ArimaPyDMLTest
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 49.732 sec - in org.apache.sysml.test.integration.applications.pydml.ArimaPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.HITSPyDMLTest
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 77.158 sec - in org.apache.sysml.test.integration.applications.pydml.HITSPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.LinearRegressionDMLTest
Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 50.764 sec - in org.apache.sysml.test.integration.applications.dml.LinearRegressionDMLTest
Running org.apache.sysml.test.integration.applications.pydml.CsplineDSPyDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 6.642 sec - in org.apache.sysml.test.integration.applications.pydml.CsplineDSPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.LinearLogRegPyDMLTest
Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 86.687 sec - in org.apache.sysml.test.integration.applications.pydml.LinearLogRegPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.NaiveBayesPyDMLTest
Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 82.103 sec - in org.apache.sysml.test.integration.applications.pydml.NaiveBayesPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.CsplineCGDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 14.091 sec - in org.apache.sysml.test.integration.applications.dml.CsplineCGDMLTest
Running org.apache.sysml.test.integration.applications.dml.L2SVMDMLTest
Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 64.103 sec - in org.apache.sysml.test.integration.applications.dml.L2SVMDMLTest
Running org.apache.sysml.test.integration.applications.pydml.MDABivariateStatsPyDMLTest
Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 300.709 sec - in org.apache.sysml.test.integration.applications.pydml.MDABivariateStatsPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.PageRankPyDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 8.255 sec - in org.apache.sysml.test.integration.applications.pydml.PageRankPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.NaiveBayesParforPyDMLTest
Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 82.256 sec - in org.apache.sysml.test.integration.applications.pydml.NaiveBayesParforPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.NaiveBayesDMLTest
Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 81.253 sec - in org.apache.sysml.test.integration.applications.dml.NaiveBayesDMLTest
Running org.apache.sysml.test.integration.applications.dml.MDABivariateStatsDMLTest
Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 294.959 sec - in org.apache.sysml.test.integration.applications.dml.MDABivariateStatsDMLTest
Running org.apache.sysml.test.integration.applications.dml.PageRankDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 8.624 sec - in org.apache.sysml.test.integration.applications.dml.PageRankDMLTest
Running org.apache.sysml.test.integration.applications.pydml.GLMPyDMLTest
Tests run: 30, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 591.34 sec - in org.apache.sysml.test.integration.applications.pydml.GLMPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.MultiClassSVMPyDMLTest
Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 90.989 sec - in org.apache.sysml.test.integration.applications.pydml.MultiClassSVMPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.ID3DMLTest
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 394.173 sec - in org.apache.sysml.test.integration.applications.dml.ID3DMLTest
Running org.apache.sysml.test.integration.applications.dml.GLMDMLTest
Tests run: 30, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 867.042 sec - in org.apache.sysml.test.integration.applications.dml.GLMDMLTest
Running org.apache.sysml.test.integration.applications.pydml.CsplineCGPyDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 6.078 sec - in org.apache.sysml.test.integration.applications.pydml.CsplineCGPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.WelchTPyDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 6.384 sec - in org.apache.sysml.test.integration.applications.pydml.WelchTPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.MultiClassSVMDMLTest
Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 88.396 sec - in org.apache.sysml.test.integration.applications.dml.MultiClassSVMDMLTest
Running org.apache.sysml.test.integration.applications.dml.CsplineDSDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 14.734 sec - in org.apache.sysml.test.integration.applications.dml.CsplineDSDMLTest
Running org.apache.sysml.test.integration.applications.pydml.ApplyTransformPyDMLTest
Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.822 sec - in org.apache.sysml.test.integration.applications.pydml.ApplyTransformPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.NaiveBayesParforDMLTest
Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 80.995 sec - in org.apache.sysml.test.integration.applications.dml.NaiveBayesParforDMLTest
Running org.apache.sysml.test.integration.applications.pydml.L2SVMPyDMLTest
Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 65.098 sec - in org.apache.sysml.test.integration.applications.pydml.L2SVMPyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.LinearRegressionPyDMLTest
Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 52.289 sec - in org.apache.sysml.test.integration.applications.pydml.LinearRegressionPyDMLTest
Running org.apache.sysml.test.integration.applications.dml.LinearLogRegDMLTest
Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 60.545 sec - in org.apache.sysml.test.integration.applications.dml.LinearLogRegDMLTest
Running org.apache.sysml.test.integration.applications.dml.GNMFDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 60.37 sec - in org.apache.sysml.test.integration.applications.dml.GNMFDMLTest
Running org.apache.sysml.test.integration.applications.dml.WelchTDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 6.374 sec - in org.apache.sysml.test.integration.applications.dml.WelchTDMLTest
Running org.apache.sysml.test.integration.applications.dml.ApplyTransformDMLTest
Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 13.376 sec - in org.apache.sysml.test.integration.applications.dml.ApplyTransformDMLTest
Running org.apache.sysml.test.integration.applications.pydml.ID3PyDMLTest
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 380.589 sec - in org.apache.sysml.test.integration.applications.pydml.ID3PyDMLTest
Running org.apache.sysml.test.integration.applications.pydml.GNMFPyDMLTest
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 56.16 sec - in org.apache.sysml.test.integration.applications.pydml.GNMFPyDMLTest

Results :

Failed tests: 
  FrameMatrixReblockTest.testFrameWriteMultipleSparseBinarySpark:170->runFrameReblockTest:230
29 values are not in equal

Tests run: 6873, Failures: 1, Errors: 0, Skipped: 0

[INFO] 
[INFO] --- maven-failsafe-plugin:2.17:verify (default) @ systemml ---
[INFO] Failsafe report directory: <https://sparktc.ibmcloud.com/jenkins/job/SystemML-DailyTest/ws/target/failsafe-reports>
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 02:26 h
[INFO] Finished at: 2017-04-22T17:45:21-05:00
[INFO] Final Memory: 63M/2125M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-failsafe-plugin:2.17:verify
(default) on project systemml: There are test failures.
[ERROR] 
[ERROR] Please refer to <https://sparktc.ibmcloud.com/jenkins/job/SystemML-DailyTest/ws/target/failsafe-reports>
for the individual test results.
[ERROR] -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following
articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
Build step 'Execute shell' marked build as failure
Run condition [Always] enabling perform for step [[]]

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