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From Sean Owen <so...@cloudera.com>
Subject Re: Spark, Scala, and DNA sequencing
Date Sun, 24 Jul 2016 07:09:43 GMT
Also also, you may be interested in GATK, built on Spark, for genomics:
https://github.com/broadinstitute/gatk


On Sun, Jul 24, 2016 at 7:56 AM, Ofir Manor <ofir.manor@equalum.io> wrote:
> Hi James,
> BTW - if you are into analyzing DNA with Spark, you may also be interested
> in ADAM:
>    https://github.com/bigdatagenomics/adam
>     http://bdgenomics.org/
>
> Ofir Manor
>
> Co-Founder & CTO | Equalum
>
> Mobile: +972-54-7801286 | Email: ofir.manor@equalum.io
>
>
> On Fri, Jul 22, 2016 at 10:31 PM, James McCabe <james@oranda.com> wrote:
>>
>> Hi!
>>
>> I hope this may be of use/interest to someone:
>>
>> Spark, a Worked Example: Speeding Up DNA Sequencing
>>
>>
>> http://scala-bility.blogspot.nl/2016/07/spark-worked-example-speeding-up-dna.html
>>
>> James
>>
>>
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