Return-Path: X-Original-To: apmail-spark-reviews-archive@minotaur.apache.org Delivered-To: apmail-spark-reviews-archive@minotaur.apache.org Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by minotaur.apache.org (Postfix) with SMTP id 2AE5C11FB2 for ; Tue, 22 Jul 2014 02:27:17 +0000 (UTC) Received: (qmail 41495 invoked by uid 500); 22 Jul 2014 02:27:17 -0000 Delivered-To: apmail-spark-reviews-archive@spark.apache.org Received: (qmail 41486 invoked by uid 500); 22 Jul 2014 02:27:17 -0000 Mailing-List: contact reviews-help@spark.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: reviews@spark.apache.org Delivered-To: mailing list reviews@spark.apache.org Received: (qmail 41475 invoked by uid 99); 22 Jul 2014 02:27:16 -0000 Received: from tyr.zones.apache.org (HELO tyr.zones.apache.org) (140.211.11.114) by apache.org (qpsmtpd/0.29) with ESMTP; Tue, 22 Jul 2014 02:27:16 +0000 Received: by tyr.zones.apache.org (Postfix, from userid 65534) id 6B9449AE533; Tue, 22 Jul 2014 02:27:16 +0000 (UTC) From: mateiz To: reviews@spark.apache.org Reply-To: reviews@spark.apache.org References: In-Reply-To: Subject: [GitHub] spark pull request: [SPARK-2538] [PySpark] Hash based disk spillin... Content-Type: text/plain Message-Id: <20140722022716.6B9449AE533@tyr.zones.apache.org> Date: Tue, 22 Jul 2014 02:27:16 +0000 (UTC) Github user mateiz commented on a diff in the pull request: https://github.com/apache/spark/pull/1460#discussion_r15208070 --- Diff: python/pyspark/shuffle.py --- @@ -0,0 +1,258 @@ +# +# Licensed to the Apache Software Foundation (ASF) under one or more +# contributor license agreements. See the NOTICE file distributed with +# this work for additional information regarding copyright ownership. +# The ASF licenses this file to You under the Apache License, Version 2.0 +# (the "License"); you may not use this file except in compliance with +# the License. You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +# + +import os +import sys +import platform +import shutil +import warnings + +from pyspark.serializers import BatchedSerializer, AutoSerializer + +try: + import psutil + + def get_used_memory(): + self = psutil.Process(os.getpid()) + return self.memory_info().rss >> 20 + +except ImportError: + + def get_used_memory(): + if platform.system() == 'Linux': + for line in open('/proc/self/status'): + if line.startswith('VmRSS:'): + return int(line.split()[1]) >> 10 + else: + warnings.warn("please install psutil to get accurate memory usage") + if platform.system() == "Darwin": + import resource + return resource.getrusage(resource.RUSAGE_SELF).ru_maxrss >> 20 + # TODO: support windows + return 0 + + +class Merger(object): + """ + merge shuffled data together by combinator + """ + + def merge(self, iterator): + raise NotImplementedError + + def iteritems(self): + raise NotImplementedError + + +class MapMerger(Merger): + """ + In memory merger based on map + """ + + def __init__(self, combiner): + self.combiner = combiner + self.data = {} + + def merge(self, iterator): + d, comb = self.data, self.combiner + for k, v in iter(iterator): + d[k] = comb(d[k], v) if k in d else v + + def iteritems(self): + return self.data.iteritems() + + +class ExternalHashMapMerger(Merger): + + """ + External merger will dump the aggregated data into disks when memory usage + is above the limit, then merge them together. + --- End diff -- Add a high-level description here about how the class works and what the main variables and methods are. For example take a look at the class comment in https://github.com/apache/spark/pull/1499/files#diff-7. --- If your project is set up for it, you can reply to this email and have your reply appear on GitHub as well. If your project does not have this feature enabled and wishes so, or if the feature is enabled but not working, please contact infrastructure at infrastructure@apache.org or file a JIRA ticket with INFRA. ---