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From Richard Hillegas <rhil...@us.ibm.com>
Subject Re: Network-related environemental problem when running JDBCSuite
Date Thu, 15 Oct 2015 17:50:55 GMT

For the record, I get the same error when I simply try to boot the spark
shell:

bash-3.2$ bin/spark-shell
log4j:WARN No appenders could be found for logger
(org.apache.hadoop.metrics2.lib.MutableMetricsFactory).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for
more info.
Using Spark's repl log4j profile:
org/apache/spark/log4j-defaults-repl.properties
To adjust logging level use sc.setLogLevel("INFO")
Welcome to
      ____              __
     / __/__  ___ _____/ /__
    _\ \/ _ \/ _ `/ __/  '_/
   /___/ .__/\_,_/_/ /_/\_\   version 1.6.0-SNAPSHOT
      /_/

Using Scala version 2.10.4 (Java HotSpot(TM) 64-Bit Server VM, Java
1.8.0_60)
Type in expressions to have them evaluated.
Type :help for more information.
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 WARN Utils: Service 'sparkDriver' could not bind on port
0. Attempting port 1.
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
15/10/15 10:49:09 ERROR NettyTransport: failed to bind to /9.52.158.156:0,
shutting down Netty transport
15/10/15 10:49:09 ERROR SparkContext: Error initializing SparkContext.
java.net.BindException: Failed to bind to: /9.52.158.156:0: Service
'sparkDriver' failed after 16 retries!
	at org.jboss.netty.bootstrap.ServerBootstrap.bind
(ServerBootstrap.java:272)
	at akka.remote.transport.netty.NettyTransport$$anonfun$listen$1.apply
(NettyTransport.scala:393)
	at akka.remote.transport.netty.NettyTransport$$anonfun$listen$1.apply
(NettyTransport.scala:389)
	at scala.util.Success$$anonfun$map$1.apply(Try.scala:206)
	at scala.util.Try$.apply(Try.scala:161)
	at scala.util.Success.map(Try.scala:206)
	at scala.concurrent.Future$$anonfun$map$1.apply(Future.scala:235)
	at scala.concurrent.Future$$anonfun$map$1.apply(Future.scala:235)
	at scala.concurrent.impl.CallbackRunnable.run(Promise.scala:32)
	at akka.dispatch.BatchingExecutor$AbstractBatch.processBatch
(BatchingExecutor.scala:55)
	at akka.dispatch.BatchingExecutor$BlockableBatch$$anonfun$run$1.apply
$mcV$sp(BatchingExecutor.scala:91)
	at akka.dispatch.BatchingExecutor$BlockableBatch$$anonfun$run$1.apply
(BatchingExecutor.scala:91)
	at akka.dispatch.BatchingExecutor$BlockableBatch$$anonfun$run$1.apply
(BatchingExecutor.scala:91)
	at scala.concurrent.BlockContext$.withBlockContext
(BlockContext.scala:72)
	at akka.dispatch.BatchingExecutor$BlockableBatch.run
(BatchingExecutor.scala:90)
	at akka.dispatch.TaskInvocation.run(AbstractDispatcher.scala:40)
	at akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec
(AbstractDispatcher.scala:397)
	at scala.concurrent.forkjoin.ForkJoinTask.doExec
(ForkJoinTask.java:260)
	at scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask
(ForkJoinPool.java:1339)
	at scala.concurrent.forkjoin.ForkJoinPool.runWorker
(ForkJoinPool.java:1979)
	at scala.concurrent.forkjoin.ForkJoinWorkerThread.run
(ForkJoinWorkerThread.java:107)
15/10/15 10:49:09 ERROR Remoting: Remoting system has been terminated
abrubtly. Attempting to shut down transports
java.net.BindException: Failed to bind to: /9.52.158.156:0: Service
'sparkDriver' failed after 16 retries!
	at org.jboss.netty.bootstrap.ServerBootstrap.bind
(ServerBootstrap.java:272)
	at akka.remote.transport.netty.NettyTransport$$anonfun$listen$1.apply
(NettyTransport.scala:393)
	at akka.remote.transport.netty.NettyTransport$$anonfun$listen$1.apply
(NettyTransport.scala:389)
	at scala.util.Success$$anonfun$map$1.apply(Try.scala:206)
	at scala.util.Try$.apply(Try.scala:161)
	at scala.util.Success.map(Try.scala:206)
	at scala.concurrent.Future$$anonfun$map$1.apply(Future.scala:235)
	at scala.concurrent.Future$$anonfun$map$1.apply(Future.scala:235)
	at scala.concurrent.impl.CallbackRunnable.run(Promise.scala:32)
	at akka.dispatch.BatchingExecutor$AbstractBatch.processBatch
(BatchingExecutor.scala:55)
	at akka.dispatch.BatchingExecutor$BlockableBatch$$anonfun$run$1.apply
$mcV$sp(BatchingExecutor.scala:91)
	at akka.dispatch.BatchingExecutor$BlockableBatch$$anonfun$run$1.apply
(BatchingExecutor.scala:91)
	at akka.dispatch.BatchingExecutor$BlockableBatch$$anonfun$run$1.apply
(BatchingExecutor.scala:91)
	at scala.concurrent.BlockContext$.withBlockContext
(BlockContext.scala:72)
	at akka.dispatch.BatchingExecutor$BlockableBatch.run
(BatchingExecutor.scala:90)
	at akka.dispatch.TaskInvocation.run(AbstractDispatcher.scala:40)
	at akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec
(AbstractDispatcher.scala:397)
	at scala.concurrent.forkjoin.ForkJoinTask.doExec
(ForkJoinTask.java:260)
	at scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask
(ForkJoinPool.java:1339)
	at scala.concurrent.forkjoin.ForkJoinPool.runWorker
(ForkJoinPool.java:1979)
	at scala.concurrent.forkjoin.ForkJoinWorkerThread.run
(ForkJoinWorkerThread.java:107)

java.lang.NullPointerException
	at org.apache.spark.sql.SQLContext$.createListenerAndUI
(SQLContext.scala:1323)
	at org.apache.spark.sql.hive.HiveContext.<init>
(HiveContext.scala:100)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native
Method)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance
(NativeConstructorAccessorImpl.java:62)
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance
(DelegatingConstructorAccessorImpl.java:45)
	at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
	at org.apache.spark.repl.SparkILoop.createSQLContext
(SparkILoop.scala:1028)
	at $iwC$$iwC.<init>(<console>:9)
	at $iwC.<init>(<console>:18)
	at <init>(<console>:20)
	at .<init>(<console>:24)
	at .<clinit>(<console>)
	at .<init>(<console>:7)
	at .<clinit>(<console>)
	at $print(<console>)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke
(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke
(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.apache.spark.repl.SparkIMain$ReadEvalPrint.call
(SparkIMain.scala:1065)
	at org.apache.spark.repl.SparkIMain$Request.loadAndRun
(SparkIMain.scala:1340)
	at org.apache.spark.repl.SparkIMain.loadAndRunReq$1
(SparkIMain.scala:840)
	at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871)
	at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819)
	at org.apache.spark.repl.SparkILoop.reallyInterpret$1
(SparkILoop.scala:857)
	at org.apache.spark.repl.SparkILoop.interpretStartingWith
(SparkILoop.scala:902)
	at org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:814)
	at org.apache.spark.repl.SparkILoopInit$$anonfun$initializeSpark
$1.apply(SparkILoopInit.scala:132)
	at org.apache.spark.repl.SparkILoopInit$$anonfun$initializeSpark
$1.apply(SparkILoopInit.scala:124)
	at org.apache.spark.repl.SparkIMain.beQuietDuring
(SparkIMain.scala:324)
	at org.apache.spark.repl.SparkILoopInit$class.initializeSpark
(SparkILoopInit.scala:124)
	at org.apache.spark.repl.SparkILoop.initializeSpark
(SparkILoop.scala:64)
	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl
$SparkILoop$$process$1$$anonfun$apply$mcZ$sp$5.apply$mcV$sp
(SparkILoop.scala:974)
	at org.apache.spark.repl.SparkILoopInit$class.runThunks
(SparkILoopInit.scala:159)
	at org.apache.spark.repl.SparkILoop.runThunks(SparkILoop.scala:64)
	at org.apache.spark.repl.SparkILoopInit$class.postInitialization
(SparkILoopInit.scala:108)
	at org.apache.spark.repl.SparkILoop.postInitialization
(SparkILoop.scala:64)
	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl
$SparkILoop$$process$1.apply$mcZ$sp(SparkILoop.scala:991)
	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl
$SparkILoop$$process$1.apply(SparkILoop.scala:945)
	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl
$SparkILoop$$process$1.apply(SparkILoop.scala:945)
	at scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader
(ScalaClassLoader.scala:135)
	at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$
$process(SparkILoop.scala:945)
	at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1059)
	at org.apache.spark.repl.Main$.main(Main.scala:31)
	at org.apache.spark.repl.Main.main(Main.scala)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke
(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke
(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy
$SparkSubmit$$runMain(SparkSubmit.scala:680)
	at org.apache.spark.deploy.SparkSubmit$.doRunMain$1
(SparkSubmit.scala:180)
	at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:205)
	at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:120)
	at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)

<console>:10: error: not found: value sqlContext
       import sqlContext.implicits._
              ^
<console>:10: error: not found: value sqlContext
       import sqlContext.sql

Thanks,
Rick Hillegas



Richard Hillegas/San Francisco/IBM@IBMUS wrote on 10/15/2015 09:47:22 AM:

> From: Richard Hillegas/San Francisco/IBM@IBMUS
> To: Dev <dev@spark.apache.org>
> Date: 10/15/2015 09:47 AM
> Subject: Network-related environemental problem when running JDBCSuite
>
> I am seeing what look like environmental errors when I try to run a
> test on a clean local branch which has been sync'd to the head of
> the development trunk. I would appreciate advice about how to debug
> or hack around this problem. For the record, the test ran cleanly
> last week. This is the experiment I am running:
>
> # build
> mvn -Pyarn -Phadoop-2.3 -DskipTests -Phive -Phive-thriftserver clean
package
>
> # run one suite
> mvn -Dhadoop.version=2.4.0 -DwildcardSuites=JDBCSuite
>
> The test bombs out before getting to JDBCSuite. I see this summary
> at the end...
>
> [INFO]
> ------------------------------------------------------------------------
> [INFO] Reactor Summary:
> [INFO]
> [INFO] Spark Project Parent POM ........................... SUCCESS
> [  2.023 s]
> [INFO] Spark Project Test Tags ............................ SUCCESS
> [  1.924 s]
> [INFO] Spark Project Launcher ............................. SUCCESS
> [  5.837 s]
> [INFO] Spark Project Networking ........................... SUCCESS
> [ 12.498 s]
> [INFO] Spark Project Shuffle Streaming Service ............ SUCCESS
> [01:28 min]
> [INFO] Spark Project Unsafe ............................... SUCCESS
> [01:09 min]
> [INFO] Spark Project Core ................................. SUCCESS
> [02:45 min]
> [INFO] Spark Project Bagel ................................ SUCCESS
> [ 30.182 s]
> [INFO] Spark Project GraphX ............................... SUCCESS
> [ 59.002 s]
> [INFO] Spark Project Streaming ............................ FAILURE
> [06:21 min]
> [INFO] Spark Project Catalyst ............................. SKIPPED
> [INFO] Spark Project SQL .................................. SKIPPED
> [INFO] Spark Project ML Library ........................... SKIPPED
> [INFO] Spark Project Tools ................................ SKIPPED
> [INFO] Spark Project Hive ................................. SKIPPED
> [INFO] Spark Project REPL ................................. SKIPPED
> [INFO] Spark Project Assembly ............................. SKIPPED
> [INFO] Spark Project External Twitter ..................... SKIPPED
> [INFO] Spark Project External Flume Sink .................. SKIPPED
> [INFO] Spark Project External Flume ....................... SKIPPED
> [INFO] Spark Project External Flume Assembly .............. SKIPPED
> [INFO] Spark Project External MQTT ........................ SKIPPED
> [INFO] Spark Project External MQTT Assembly ............... SKIPPED
> [INFO] Spark Project External ZeroMQ ...................... SKIPPED
> [INFO] Spark Project External Kafka ....................... SKIPPED
> [INFO] Spark Project Examples ............................. SKIPPED
> [INFO] Spark Project External Kafka Assembly .............. SKIPPED
> [INFO]
> ------------------------------------------------------------------------
> [INFO] BUILD FAILURE
> [INFO]
> ------------------------------------------------------------------------
> [INFO] Total time: 13:37 min
> [INFO] Finished at: 2015-10-15T09:03:06-07:00
> [INFO] Final Memory: 69M/793M
> [INFO]
> ------------------------------------------------------------------------
> [ERROR] Failed to execute goal org.apache.maven.plugins:maven-
> surefire-plugin:2.18.1:test (default-test) on project spark-
> streaming_2.10: There are test failures.
> [ERROR]
> [ERROR] Please refer to /Users/rhillegas/spark/spark/streaming/
> target/surefire-reports for the individual test results.
> [ERROR] -> [Help 1]
> [ERROR]
> [ERROR] To see the full stack trace of the errors, re-run Maven with
> the -e switch.
> [ERROR] Re-run Maven using the -X switch to enable full debug logging.
> [ERROR]
> [ERROR] For more information about the errors and possible
> solutions, please read the following articles:
> [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/
> MojoFailureException
> [ERROR]
> [ERROR] After correcting the problems, you can resume the build with
> the command
> [ERROR]   mvn <goals> -rf :spark-streaming_2.10
>
>
>
> From the logs in streaming/target/surefire-reports, it appears that
> the following tests failed...
>
> org.apache.spark.streaming.JavaAPISuite.txt
> org.apache.spark.streaming.JavaReceiverAPISuite.txt
>
> ...with this error:
>
> java.net.BindException: Failed to bind to: /9.52.158.156:0: Service
> 'sparkDriver' failed after 100 retries!
> at org.jboss.netty.bootstrap.ServerBootstrap.bind
(ServerBootstrap.java:272)
> at akka.remote.transport.netty.NettyTransport$$anonfun$listen
> $1.apply(NettyTransport.scala:393)
> at akka.remote.transport.netty.NettyTransport$$anonfun$listen
> $1.apply(NettyTransport.scala:389)
> at scala.util.Success$$anonfun$map$1.apply(Try.scala:206)
> at scala.util.Try$.apply(Try.scala:161)
> at scala.util.Success.map(Try.scala:206)
> at scala.concurrent.Future$$anonfun$map$1.apply(Future.scala:235)
> at scala.concurrent.Future$$anonfun$map$1.apply(Future.scala:235)
> at scala.concurrent.impl.CallbackRunnable.run(Promise.scala:32)
> at akka.dispatch.BatchingExecutor$AbstractBatch.processBatch
> (BatchingExecutor.scala:55)
> at akka.dispatch.BatchingExecutor$BlockableBatch$$anonfun$run
> $1.apply$mcV$sp(BatchingExecutor.scala:91)
> at akka.dispatch.BatchingExecutor$BlockableBatch$$anonfun$run
> $1.apply(BatchingExecutor.scala:91)
> at akka.dispatch.BatchingExecutor$BlockableBatch$$anonfun$run
> $1.apply(BatchingExecutor.scala:91)
> at scala.concurrent.BlockContext$.withBlockContext(BlockContext.scala:72)
> at akka.dispatch.BatchingExecutor$BlockableBatch.run
> (BatchingExecutor.scala:90)
> at akka.dispatch.TaskInvocation.run(AbstractDispatcher.scala:40)
> at akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec
> (AbstractDispatcher.scala:397)
> at scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
> at scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask
> (ForkJoinPool.java:1339)
> at scala.concurrent.forkjoin.ForkJoinPool.runWorker
(ForkJoinPool.java:1979)
> at scala.concurrent.forkjoin.ForkJoinWorkerThread.run
> (ForkJoinWorkerThread.java:107)
>
>
> It is suggested that there might be a problem with my /etc/hosts,
> according to http://stackoverflow.com/questions/29906686/failed-to-
> bind-to-spark-master-using-a-remote-cluster-with-two-workers. But /
> etc/hosts looks fine to me:
>
> bash-3.2$ cat /etc/hosts
> ##
> # Host Database
> #
> # localhost is used to configure the loopback interface
> # when the system is booting.  Do not change this entry.
> ##
> 127.0.0.1 localhost
> 255.255.255.255 broadcasthost
> ::1             localhost
>
> Is there some environmental variable, config file setting, or JVM
> system property which will hack around this problem? Any advice
> would be appreciated.
>
>
> Thanks,
> -Rick
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