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From joshro...@apache.org
Subject git commit: [SPARK-3309] [PySpark] Put all public API in __all__
Date Wed, 03 Sep 2014 18:49:53 GMT
Repository: spark
Updated Branches:
  refs/heads/master 6a72a3694 -> 6481d2742


[SPARK-3309] [PySpark] Put all public API in __all__

Put all public API in __all__, also put them all in pyspark.__init__.py, then we can got all
the documents for public API by `pydoc pyspark`. It also can be used by other programs (such
as Sphinx or Epydoc) to generate only documents for public APIs.

Author: Davies Liu <davies.liu@gmail.com>

Closes #2205 from davies/public and squashes the following commits:

c6c5567 [Davies Liu] fix message
f7b35be [Davies Liu] put SchemeRDD, Row in pyspark.sql module
7e3016a [Davies Liu] add __all__ in mllib
6281b48 [Davies Liu] fix doc for SchemaRDD
6caab21 [Davies Liu] add public interfaces into pyspark.__init__.py


Project: http://git-wip-us.apache.org/repos/asf/spark/repo
Commit: http://git-wip-us.apache.org/repos/asf/spark/commit/6481d274
Tree: http://git-wip-us.apache.org/repos/asf/spark/tree/6481d274
Diff: http://git-wip-us.apache.org/repos/asf/spark/diff/6481d274

Branch: refs/heads/master
Commit: 6481d27425f6d42ead36663c9a4ef7ee13b3a8c9
Parents: 6a72a36
Author: Davies Liu <davies.liu@gmail.com>
Authored: Wed Sep 3 11:49:45 2014 -0700
Committer: Josh Rosen <joshrosen@apache.org>
Committed: Wed Sep 3 11:49:45 2014 -0700

----------------------------------------------------------------------
 python/pyspark/__init__.py             | 14 +++++++++-----
 python/pyspark/accumulators.py         |  3 +++
 python/pyspark/broadcast.py            | 24 ++++++++++++++----------
 python/pyspark/conf.py                 |  2 ++
 python/pyspark/context.py              |  3 +++
 python/pyspark/files.py                |  3 +++
 python/pyspark/mllib/classification.py |  4 ++++
 python/pyspark/mllib/clustering.py     |  2 ++
 python/pyspark/mllib/linalg.py         |  3 +++
 python/pyspark/mllib/random.py         |  3 +++
 python/pyspark/mllib/recommendation.py |  2 ++
 python/pyspark/mllib/regression.py     | 10 +++++-----
 python/pyspark/mllib/stat.py           |  6 ++++--
 python/pyspark/mllib/tree.py           |  4 ++++
 python/pyspark/rdd.py                  |  1 +
 python/pyspark/serializers.py          |  2 +-
 python/pyspark/sql.py                  | 21 ++++++++++++++++++---
 17 files changed, 81 insertions(+), 26 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/__init__.py
----------------------------------------------------------------------
diff --git a/python/pyspark/__init__.py b/python/pyspark/__init__.py
index c58555f..1a2e774 100644
--- a/python/pyspark/__init__.py
+++ b/python/pyspark/__init__.py
@@ -61,13 +61,17 @@ sys.path.insert(0, s)
 
 from pyspark.conf import SparkConf
 from pyspark.context import SparkContext
-from pyspark.sql import SQLContext
 from pyspark.rdd import RDD
-from pyspark.sql import SchemaRDD
-from pyspark.sql import Row
 from pyspark.files import SparkFiles
 from pyspark.storagelevel import StorageLevel
+from pyspark.accumulators import Accumulator, AccumulatorParam
+from pyspark.broadcast import Broadcast
+from pyspark.serializers import MarshalSerializer, PickleSerializer
 
+# for back compatibility
+from pyspark.sql import SQLContext, HiveContext, SchemaRDD, Row
 
-__all__ = ["SparkConf", "SparkContext", "SQLContext", "RDD", "SchemaRDD",
-           "SparkFiles", "StorageLevel", "Row"]
+__all__ = [
+    "SparkConf", "SparkContext", "SparkFiles", "RDD", "StorageLevel", "Broadcast",
+    "Accumulator", "AccumulatorParam", "MarshalSerializer", "PickleSerializer",
+]

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/accumulators.py
----------------------------------------------------------------------
diff --git a/python/pyspark/accumulators.py b/python/pyspark/accumulators.py
index f133cf6..ccbca67 100644
--- a/python/pyspark/accumulators.py
+++ b/python/pyspark/accumulators.py
@@ -94,6 +94,9 @@ from pyspark.cloudpickle import CloudPickler
 from pyspark.serializers import read_int, PickleSerializer
 
 
+__all__ = ['Accumulator', 'AccumulatorParam']
+
+
 pickleSer = PickleSerializer()
 
 # Holds accumulators registered on the current machine, keyed by ID. This is then used to
send

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/broadcast.py
----------------------------------------------------------------------
diff --git a/python/pyspark/broadcast.py b/python/pyspark/broadcast.py
index 675a2fc..5c7c9cc 100644
--- a/python/pyspark/broadcast.py
+++ b/python/pyspark/broadcast.py
@@ -31,6 +31,10 @@ import os
 
 from pyspark.serializers import CompressedSerializer, PickleSerializer
 
+
+__all__ = ['Broadcast']
+
+
 # Holds broadcasted data received from Java, keyed by its id.
 _broadcastRegistry = {}
 
@@ -59,11 +63,20 @@ class Broadcast(object):
         """
         self.bid = bid
         if path is None:
-            self.value = value
+            self._value = value
         self._jbroadcast = java_broadcast
         self._pickle_registry = pickle_registry
         self.path = path
 
+    @property
+    def value(self):
+        """ Return the broadcasted value
+        """
+        if not hasattr(self, "_value") and self.path is not None:
+            ser = CompressedSerializer(PickleSerializer())
+            self._value = ser.load_stream(open(self.path)).next()
+        return self._value
+
     def unpersist(self, blocking=False):
         self._jbroadcast.unpersist(blocking)
         os.unlink(self.path)
@@ -72,15 +85,6 @@ class Broadcast(object):
         self._pickle_registry.add(self)
         return (_from_id, (self.bid, ))
 
-    def __getattr__(self, item):
-        if item == 'value' and self.path is not None:
-            ser = CompressedSerializer(PickleSerializer())
-            value = ser.load_stream(open(self.path)).next()
-            self.value = value
-            return value
-
-        raise AttributeError(item)
-
 
 if __name__ == "__main__":
     import doctest

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/conf.py
----------------------------------------------------------------------
diff --git a/python/pyspark/conf.py b/python/pyspark/conf.py
index fb716f6..b64875a 100644
--- a/python/pyspark/conf.py
+++ b/python/pyspark/conf.py
@@ -54,6 +54,8 @@ spark.home=/path
 (u'spark.executorEnv.VAR4', u'value4'), (u'spark.home', u'/path')]
 """
 
+__all__ = ['SparkConf']
+
 
 class SparkConf(object):
 

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/context.py
----------------------------------------------------------------------
diff --git a/python/pyspark/context.py b/python/pyspark/context.py
index 6e4fdaa..5a30431 100644
--- a/python/pyspark/context.py
+++ b/python/pyspark/context.py
@@ -37,6 +37,9 @@ from pyspark.rdd import RDD
 from py4j.java_collections import ListConverter
 
 
+__all__ = ['SparkContext']
+
+
 # These are special default configs for PySpark, they will overwrite
 # the default ones for Spark if they are not configured by user.
 DEFAULT_CONFIGS = {

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/files.py
----------------------------------------------------------------------
diff --git a/python/pyspark/files.py b/python/pyspark/files.py
index 331de9a..797573f 100644
--- a/python/pyspark/files.py
+++ b/python/pyspark/files.py
@@ -18,6 +18,9 @@
 import os
 
 
+__all__ = ['SparkFiles']
+
+
 class SparkFiles(object):
 
     """

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/mllib/classification.py
----------------------------------------------------------------------
diff --git a/python/pyspark/mllib/classification.py b/python/pyspark/mllib/classification.py
index ffdda7e..71ab46b 100644
--- a/python/pyspark/mllib/classification.py
+++ b/python/pyspark/mllib/classification.py
@@ -30,6 +30,10 @@ from pyspark.mllib.regression import LabeledPoint, LinearModel
 from math import exp, log
 
 
+__all__ = ['LogisticRegressionModel', 'LogisticRegressionWithSGD', 'SVMModel',
+           'SVMWithSGD', 'NaiveBayesModel', 'NaiveBayes']
+
+
 class LogisticRegressionModel(LinearModel):
 
     """A linear binary classification model derived from logistic regression.

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/mllib/clustering.py
----------------------------------------------------------------------
diff --git a/python/pyspark/mllib/clustering.py b/python/pyspark/mllib/clustering.py
index a0630d1..f3e952a 100644
--- a/python/pyspark/mllib/clustering.py
+++ b/python/pyspark/mllib/clustering.py
@@ -25,6 +25,8 @@ from pyspark.mllib._common import \
     _get_initial_weights, _serialize_rating, _regression_train_wrapper
 from pyspark.mllib.linalg import SparseVector
 
+__all__ = ['KMeansModel', 'KMeans']
+
 
 class KMeansModel(object):
 

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/mllib/linalg.py
----------------------------------------------------------------------
diff --git a/python/pyspark/mllib/linalg.py b/python/pyspark/mllib/linalg.py
index f485a69..e69051c 100644
--- a/python/pyspark/mllib/linalg.py
+++ b/python/pyspark/mllib/linalg.py
@@ -27,6 +27,9 @@ import numpy
 from numpy import array, array_equal, ndarray, float64, int32
 
 
+__all__ = ['SparseVector', 'Vectors']
+
+
 class SparseVector(object):
 
     """

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/mllib/random.py
----------------------------------------------------------------------
diff --git a/python/pyspark/mllib/random.py b/python/pyspark/mllib/random.py
index 4dc1a4a..3e59c73 100644
--- a/python/pyspark/mllib/random.py
+++ b/python/pyspark/mllib/random.py
@@ -25,6 +25,9 @@ from pyspark.mllib._common import _deserialize_double, _deserialize_double_vecto
 from pyspark.serializers import NoOpSerializer
 
 
+__all__ = ['RandomRDDs', ]
+
+
 class RandomRDDs:
     """
     Generator methods for creating RDDs comprised of i.i.d samples from

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/mllib/recommendation.py
----------------------------------------------------------------------
diff --git a/python/pyspark/mllib/recommendation.py b/python/pyspark/mllib/recommendation.py
index e863fc2..2df2339 100644
--- a/python/pyspark/mllib/recommendation.py
+++ b/python/pyspark/mllib/recommendation.py
@@ -24,6 +24,8 @@ from pyspark.mllib._common import \
     _serialize_tuple, RatingDeserializer
 from pyspark.rdd import RDD
 
+__all__ = ['MatrixFactorizationModel', 'ALS']
+
 
 class MatrixFactorizationModel(object):
 

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/mllib/regression.py
----------------------------------------------------------------------
diff --git a/python/pyspark/mllib/regression.py b/python/pyspark/mllib/regression.py
index d8792cf..f572dcf 100644
--- a/python/pyspark/mllib/regression.py
+++ b/python/pyspark/mllib/regression.py
@@ -17,15 +17,15 @@
 
 from numpy import array, ndarray
 from pyspark import SparkContext
-from pyspark.mllib._common import \
-    _dot, _get_unmangled_rdd, _get_unmangled_double_vector_rdd, \
-    _serialize_double_matrix, _deserialize_double_matrix, \
-    _serialize_double_vector, _deserialize_double_vector, \
-    _get_initial_weights, _serialize_rating, _regression_train_wrapper, \
+from pyspark.mllib._common import _dot, _regression_train_wrapper, \
     _linear_predictor_typecheck, _have_scipy, _scipy_issparse
 from pyspark.mllib.linalg import SparseVector, Vectors
 
 
+__all__ = ['LabeledPoint', 'LinearModel', 'LinearRegressionModel', 'RidgeRegressionModel'
+           'LinearRegressionWithSGD', 'LassoWithSGD', 'RidgeRegressionWithSGD']
+
+
 class LabeledPoint(object):
 
     """

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/mllib/stat.py
----------------------------------------------------------------------
diff --git a/python/pyspark/mllib/stat.py b/python/pyspark/mllib/stat.py
index feef0d1..8c726f1 100644
--- a/python/pyspark/mllib/stat.py
+++ b/python/pyspark/mllib/stat.py
@@ -21,8 +21,10 @@ Python package for statistical functions in MLlib.
 
 from pyspark.mllib._common import \
     _get_unmangled_double_vector_rdd, _get_unmangled_rdd, \
-    _serialize_double, _serialize_double_vector, \
-    _deserialize_double, _deserialize_double_matrix, _deserialize_double_vector
+    _serialize_double, _deserialize_double_matrix, _deserialize_double_vector
+
+
+__all__ = ['MultivariateStatisticalSummary', 'Statistics']
 
 
 class MultivariateStatisticalSummary(object):

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/mllib/tree.py
----------------------------------------------------------------------
diff --git a/python/pyspark/mllib/tree.py b/python/pyspark/mllib/tree.py
index e9d778d..a2fade6 100644
--- a/python/pyspark/mllib/tree.py
+++ b/python/pyspark/mllib/tree.py
@@ -26,6 +26,9 @@ from pyspark.mllib.regression import LabeledPoint
 from pyspark.serializers import NoOpSerializer
 
 
+__all__ = ['DecisionTreeModel', 'DecisionTree']
+
+
 class DecisionTreeModel(object):
 
     """
@@ -88,6 +91,7 @@ class DecisionTree(object):
                   It will probably be modified for Spark v1.2.
 
     Example usage:
+
     >>> from numpy import array
     >>> import sys
     >>> from pyspark.mllib.regression import LabeledPoint

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/rdd.py
----------------------------------------------------------------------
diff --git a/python/pyspark/rdd.py b/python/pyspark/rdd.py
index 6fc9f66..dff6fc2 100644
--- a/python/pyspark/rdd.py
+++ b/python/pyspark/rdd.py
@@ -48,6 +48,7 @@ from pyspark.shuffle import Aggregator, InMemoryMerger, ExternalMerger,
\
 
 from py4j.java_collections import ListConverter, MapConverter
 
+
 __all__ = ["RDD"]
 
 

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/serializers.py
----------------------------------------------------------------------
diff --git a/python/pyspark/serializers.py b/python/pyspark/serializers.py
index fc49aa4..55e6cf3 100644
--- a/python/pyspark/serializers.py
+++ b/python/pyspark/serializers.py
@@ -409,7 +409,7 @@ class AutoSerializer(FramedSerializer):
 
 class CompressedSerializer(FramedSerializer):
     """
-    compress the serialized data
+    Compress the serialized data
     """
 
     def __init__(self, serializer):

http://git-wip-us.apache.org/repos/asf/spark/blob/6481d274/python/pyspark/sql.py
----------------------------------------------------------------------
diff --git a/python/pyspark/sql.py b/python/pyspark/sql.py
index 0ff6a54..4431692 100644
--- a/python/pyspark/sql.py
+++ b/python/pyspark/sql.py
@@ -40,8 +40,7 @@ __all__ = [
     "StringType", "BinaryType", "BooleanType", "TimestampType", "DecimalType",
     "DoubleType", "FloatType", "ByteType", "IntegerType", "LongType",
     "ShortType", "ArrayType", "MapType", "StructField", "StructType",
-    "SQLContext", "HiveContext", "LocalHiveContext", "TestHiveContext",
-    "SchemaRDD", "Row"]
+    "SQLContext", "HiveContext", "SchemaRDD", "Row"]
 
 
 class DataType(object):
@@ -1037,7 +1036,7 @@ class SQLContext:
                              "can not infer schema")
         if type(first) is dict:
             warnings.warn("Using RDD of dict to inferSchema is deprecated,"
-                          "please use pyspark.Row instead")
+                          "please use pyspark.sql.Row instead")
 
         schema = _infer_schema(first)
         rdd = rdd.mapPartitions(lambda rows: _drop_schema(rows, schema))
@@ -1487,6 +1486,21 @@ class Row(tuple):
             return "<Row(%s)>" % ", ".join(self)
 
 
+def inherit_doc(cls):
+    for name, func in vars(cls).items():
+        # only inherit docstring for public functions
+        if name.startswith("_"):
+            continue
+        if not func.__doc__:
+            for parent in cls.__bases__:
+                parent_func = getattr(parent, name, None)
+                if parent_func and getattr(parent_func, "__doc__", None):
+                    func.__doc__ = parent_func.__doc__
+                    break
+    return cls
+
+
+@inherit_doc
 class SchemaRDD(RDD):
 
     """An RDD of L{Row} objects that has an associated schema.
@@ -1563,6 +1577,7 @@ class SchemaRDD(RDD):
         self._jschema_rdd.registerTempTable(name)
 
     def registerAsTable(self, name):
+        """DEPRECATED: use registerTempTable() instead"""
         warnings.warn("Use registerTempTable instead of registerAsTable.", DeprecationWarning)
         self.registerTempTable(name)
 


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