From solr-user-return-146334-archive-asf-public=cust-asf.ponee.io@lucene.apache.org Tue Feb 12 17:10:03 2019 Return-Path: X-Original-To: archive-asf-public@cust-asf.ponee.io Delivered-To: archive-asf-public@cust-asf.ponee.io Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by mx-eu-01.ponee.io (Postfix) with SMTP id 4DE08180675 for ; Tue, 12 Feb 2019 18:10:02 +0100 (CET) Received: (qmail 95840 invoked by uid 500); 12 Feb 2019 17:10:00 -0000 Mailing-List: contact solr-user-help@lucene.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: solr-user@lucene.apache.org Delivered-To: mailing list solr-user@lucene.apache.org Received: (qmail 95823 invoked by uid 99); 12 Feb 2019 17:09:59 -0000 Received: from pnap-us-west-generic-nat.apache.org (HELO spamd3-us-west.apache.org) (209.188.14.142) by apache.org (qpsmtpd/0.29) with ESMTP; Tue, 12 Feb 2019 17:09:59 +0000 Received: from localhost (localhost [127.0.0.1]) by spamd3-us-west.apache.org (ASF Mail Server at spamd3-us-west.apache.org) with ESMTP id 3D697182124 for ; Tue, 12 Feb 2019 17:09:59 +0000 (UTC) X-Virus-Scanned: Debian amavisd-new at spamd3-us-west.apache.org X-Spam-Flag: NO X-Spam-Score: -0.201 X-Spam-Level: X-Spam-Status: No, score=-0.201 tagged_above=-999 required=6.31 tests=[DKIMWL_WL_MED=-0.001, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_NONE=-0.0001, SPF_PASS=-0.001, URIBL_BLOCKED=0.001] autolearn=disabled Authentication-Results: spamd3-us-west.apache.org (amavisd-new); dkim=pass (2048-bit key) header.d=gmail.com Received: from mx1-lw-eu.apache.org ([10.40.0.8]) by localhost (spamd3-us-west.apache.org [10.40.0.10]) (amavisd-new, port 10024) with ESMTP id 7tFWMd7KBc0Q for ; Tue, 12 Feb 2019 17:09:55 +0000 (UTC) Received: from mail-lf1-f41.google.com (mail-lf1-f41.google.com [209.85.167.41]) by mx1-lw-eu.apache.org (ASF Mail Server at mx1-lw-eu.apache.org) with ESMTPS id 0F4B95F415 for ; Tue, 12 Feb 2019 17:09:55 +0000 (UTC) Received: by mail-lf1-f41.google.com with SMTP id b20so2562365lfa.12 for ; Tue, 12 Feb 2019 09:09:55 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=mime-version:references:in-reply-to:from:date:message-id:subject:to :content-transfer-encoding; bh=Lgg39Whrpbc1yanFUiXkpg72iETut9aiqf6ApLOJ4mI=; b=nJ/iciYHNBhxWju7fmFvneicynGB+IXq77YHfLOwXryyWt2LYDIw5yyLVSlC/tPefV bow24aINi4O66dicacaB5StEAtYbQ5FBRjRzqaeAq+OQCo7Z2oX4EyVFAKZVr22ER4Mg iX2NCYsG8vwTP2CxKbtnJ6ggVUwIsbNNRl9pN4IUWfju0jra4siicW3nwwr83SniL22L EXQcI3y7aI+SBBtKIm+nzmVHPmop+4FKaSsnXGMCIzIFgO1C7r5YyF79HDzzdvJoHqdB /8dPYO6w6BPRZyPJpr7WRwAwHZuHlRBlIdS28clBmATN4t7Gk1L7Zvk99h5rYVZccqdF mwVg== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:mime-version:references:in-reply-to:from:date :message-id:subject:to:content-transfer-encoding; bh=Lgg39Whrpbc1yanFUiXkpg72iETut9aiqf6ApLOJ4mI=; b=To9LfatvL1n4wcZmyJLDL+gbOOZGMHbeQCRpbeBlqrHDIbPn18gdJdZeProc+/iwyr Th0ozzxha1qS298PtP/ZdbwIr8VS+leZoBkTSN+q7IUx9GC8Ky9TWXZXS+WgbN9M8zU3 VSymKIUocGZzWKDA//dQncQpfiJprYcXl7Pg6WFdpFYRrrtvG7MyJx6UzwAVVzBOC7tp AAnxOC/72nEae1dO4KsZzjD/NtUx7AUCmlJxhAp3OGJVj9L9dXFE4X0ZXNbA8HOrsZF3 8wwtbtdGdske+Z841tnkrFp2Xny9/xy369S7J4nDc4KAQHGVnV3dt/rVxn70rrx48zow pscQ== X-Gm-Message-State: AHQUAuZWMhDfS6r40VfOiZ4HLFPhhooUCc51kcoaoTwphxFcIOGK8W0u ukQASipSJVQB7u5aSUIzqoopeueOYzPrP5McLhQ/9Y9H X-Google-Smtp-Source: AHgI3IbL+WxbWZ9ijFjJqGpZfR1iAMVDW1JeWYxmFjQhHc8ugICo8A78TFD44L6jhEXRrt6KiCz0wS5LW373TvBfPS8= X-Received: by 2002:a19:2812:: with SMTP id o18mr3041348lfo.128.1549991393788; Tue, 12 Feb 2019 09:09:53 -0800 (PST) MIME-Version: 1.0 References: In-Reply-To: From: Erick Erickson Date: Tue, 12 Feb 2019 09:09:17 -0800 Message-ID: Subject: Re: misteriuos nullpointerexception while adding documents To: solr-user Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable bq. I disabled autocommit (both soft and hard), but used to work with a previous version of the schema. First, did you _change_ the schema without 1> deleting all the docs in the index 2> reindexing everything or better, indexing to a new collection and aliasing to it? If you changed the schema and continued indexing to the collection _at any time in the past_ you may have inconsistent merged segments. The only way to fix this is to re-index, and I strongly recommend to a new collection. Second: do _not_ disable, commits and index for a long time. 1> your tlog will grow forever until you do a hard commit 2> certain internal Solr structures grow until a new searcher is opened, either soft commit or hard-commit-with-opensearcher-true https://lucidworks.com/2013/08/23/understanding-transaction-logs-softcommit= -and-commit-in-sorlcloud/ Best, Erick On Tue, Feb 12, 2019 at 1:03 AM MUNENDRA S.N wrot= e: > > Are you trying to set some field to null in the request?? Also, is that > particular field numeric, doc valued enabled and stored set to false?? > Sharing more details would help here, specifically update request and > schema for those fields. > > Regards, > Munendra S N > > > On Tue, Feb 12, 2019 at 2:24 PM Danilo Tomasoni wrote= : > > > Hello all, > > > > I get this error while uploading my documents with 'set' modifier in > > json format. > > > > My solr version is 7.3.1. > > > > I disabled autocommit (both soft and hard), but used to work with a > > previous version of the schema. > > > > Someone have any clue on what's going on here? > > > > I can't reproduce the issue indexing locally on another solr 7.3.1 > > instance, I get this error only in the production instance. > > > > Thank you > > > > Danilo > > > > > > =3D=3D=3D=3D=3D=3D=3D=3D This is the error I get from client =3D=3D=3D= =3D=3D=3D=3D=3D > > > > > > { > > "responseHeader":{ > > "status":500, > > "QTime":33}, > > "error":{ > > "trace":" > > > > java.lang.NullPointerException > > at org.apache.solr.update.UpdateLog.lookup(UpdateLog.java:971) > > at > > > > org.apache.solr.handler.component.RealTimeGetComponent.getInputDocument= FromTlog(RealTimeGetComponent.java:537) > > at > > > > org.apache.solr.handler.component.RealTimeGetComponent.getInputDocument= (RealTimeGetComponent.java:617) > > at > > > > org.apache.solr.handler.component.RealTimeGetComponent.getInputDocument= (RealTimeGetComponent.java:594) > > at > > > > org.apache.solr.update.processor.DistributedUpdateProcessor.getUpdatedD= ocument(DistributedUpdateProcessor.java:1330) > > at > > > > org.apache.solr.update.processor.DistributedUpdateProcessor.versionAdd(= DistributedUpdateProcessor.java:1049) > > at > > > > org.apache.solr.update.processor.DistributedUpdateProcessor.processAdd(= DistributedUpdateProcessor.java:633) > > at > > > > org.apache.solr.update.processor.LogUpdateProcessorFactory$LogUpdatePro= cessor.processAdd(LogUpdateProcessorFactory.java:103) > > at > > > > org.apache.solr.update.processor.UpdateRequestProcessor.processAdd(Upda= teRequestProcessor.java:55) > > at > > > > org.apache.solr.update.processor.FieldMutatingUpdateProcessor.processAd= d(FieldMutatingUpdateProcessor.java:118) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.hand= leAdds(JsonLoader.java:501) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.proc= essUpdate(JsonLoader.java:145) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.load= (JsonLoader.java:121) > > at org.apache.solr.handler.loader.JsonLoader.load(JsonLoader.java:= 84) > > at > > > > org.apache.solr.handler.UpdateRequestHandler$1.load(UpdateRequestHandle= r.java:97) > > at > > > > org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(Cont= entStreamHandlerBase.java:68) > > at > > > > org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandler= Base.java:195) > > at org.apache.solr.core.SolrCore.execute(SolrCore.java:2503) > > at org.apache.solr.servlet.HttpSolrCall.execute(HttpSolrCall.java:= 711) > > at org.apache.solr.servlet.HttpSolrCall.call(HttpSolrCall.java:517= ) > > at > > > > org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.= java:384) > > at > > > > org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.= java:330) > > at > > > > org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHa= ndler.java:1629) > > at > > org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:5= 33) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.jav= a:143) > > at > > org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:= 548) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler= .java:190) > > at > > > > org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler= .java:1595) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler= .java:188) > > at > > > > org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler= .java:1253) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.= java:168) > > at > > org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:47= 3) > > at > > > > org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.= java:1564) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.= java:166) > > at > > > > org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.= java:1155) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.jav= a:141) > > at > > > > org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(Contex= tHandlerCollection.java:219) > > at > > > > org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollec= tion.java:126) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at > > > > org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.= java:335) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at org.eclipse.jetty.server.Server.handle(Server.java:530) > > at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:34= 7) > > at > > org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:= 256) > > at > > org.eclipse.jetty.io > > .AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279) > > at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:10= 2) > > at > > org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:124) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhat= YouKill.java:247) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYo= uKill.java:140) > > at > > > > org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.= java:708) > > at > > > > org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.j= ava:626) > > at java.lang.Thread.run(Thread.java:748) > > " > > > > } > > > > > > =3D=3D=3D=3D=3D=3D=3D this is the error I see in solr.log =3D=3D=3D= =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D > > > > > > 2019-02-12 08:43:01.592 INFO (qtp2137589296-19) [ x:COSBIBioIndex] > > o.a.s.u.p.LogUpdateProcessorFactory [COSBIBioIndex] webapp=3D/solr > > path=3D/update/json params=3D{}{add=3D[PUBMEDPMID24951927 > > (1625251880396390400), PUBMEDPMID19328818 (1625251880437284864), > > PUBMEDPMID24304416 (1625251880442527744), PUBMEDPMID24398789 > > (1625251880446722048), PUBMEDPMID23111281 (1625251880455110656), > > PUBMEDPMID26933085 (1625251880464547840), PUBMEDPMID18635358 > > (1625251880471887872), PUBMEDPMID26856594 (1625251880472936448), > > PUBMEDPMID21803289 (1625251880479227904), PUBMEDPMID25722448 > > (1625251880487616512), ... (194 adds)]} 0 5567 > > 2019-02-12 08:43:01.594 ERROR (qtp2137589296-19) [ x:COSBIBioIndex] > > o.a.s.h.RequestHandlerBase org.eclipse.jetty.io.EofException: Early EOF > > at org.eclipse.jetty.server.HttpInput$3.getError(HttpInput.java:11= 26) > > at org.eclipse.jetty.server.HttpInput$3.noContent(HttpInput.java:1= 115) > > at org.eclipse.jetty.server.HttpInput.read(HttpInput.java:309) > > at > > > > org.apache.commons.io.input.ProxyInputStream.read(ProxyInputStream.java= :100) > > at sun.nio.cs.StreamDecoder.readBytes(StreamDecoder.java:284) > > at sun.nio.cs.StreamDecoder.implRead(StreamDecoder.java:326) > > at sun.nio.cs.StreamDecoder.read(StreamDecoder.java:178) > > at java.io.InputStreamReader.read(InputStreamReader.java:184) > > at org.noggit.JSONParser.fill(JSONParser.java:208) > > at org.noggit.JSONParser.getMore(JSONParser.java:215) > > at org.noggit.JSONParser.readStringChars2(JSONParser.java:709) > > at org.noggit.JSONParser.readStringChars(JSONParser.java:689) > > at org.noggit.JSONParser.getStringChars(JSONParser.java:1154) > > at org.noggit.JSONParser.getString(JSONParser.java:1142) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.pars= eSingleFieldValue(JsonLoader.java:637) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.pars= eArrayFieldValue(JsonLoader.java:667) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.pars= eNormalFieldValue(JsonLoader.java:625) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.pars= eExtendedFieldValue(JsonLoader.java:599) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.pars= eFieldValue(JsonLoader.java:557) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.pars= eDoc(JsonLoader.java:543) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.hand= leAdds(JsonLoader.java:500) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.proc= essUpdate(JsonLoader.java:145) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.load= (JsonLoader.java:121) > > at org.apache.solr.handler.loader.JsonLoader.load(JsonLoader.java:= 84) > > at > > > > org.apache.solr.handler.UpdateRequestHandler$1.load(UpdateRequestHandle= r.java:97) > > at > > > > org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(Cont= entStreamHandlerBase.java:68) > > at > > > > org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandler= Base.java:195) > > at org.apache.solr.core.SolrCore.execute(SolrCore.java:2503) > > at org.apache.solr.servlet.HttpSolrCall.execute(HttpSolrCall.java:= 711) > > at org.apache.solr.servlet.HttpSolrCall.call(HttpSolrCall.java:517= ) > > at > > > > org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.= java:384) > > at > > > > org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.= java:330) > > at > > > > org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHa= ndler.java:1629) > > at > > org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:5= 33) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.jav= a:143) > > at > > org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:= 548) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler= .java:190) > > at > > > > org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler= .java:1595) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler= .java:188) > > at > > > > org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler= .java:1253) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.= java:168) > > at > > org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:47= 3) > > at > > > > org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.= java:1564) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.= java:166) > > at > > > > org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.= java:1155) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.jav= a:141) > > at > > > > org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(Contex= tHandlerCollection.java:219) > > at > > > > org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollec= tion.java:126) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at > > > > org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.= java:335) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at org.eclipse.jetty.server.Server.handle(Server.java:530) > > at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:34= 7) > > at > > org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:= 256) > > at > > org.eclipse.jetty.io > > .AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279) > > at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:10= 2) > > at org.eclipse.jetty.io > > .ChannelEndPoint$2.run(ChannelEndPoint.java:124) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhat= YouKill.java:247) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYo= uKill.java:140) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKil= l.java:131) > > at > > > > org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run= (ReservedThreadExecutor.java:382) > > at > > > > org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.= java:708) > > at > > > > org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.j= ava:626) > > at java.lang.Thread.run(Thread.java:748) > > > > 2019-02-12 08:43:01.599 ERROR (qtp2137589296-19) [ x:COSBIBioIndex] > > o.a.s.s.HttpSolrCall null:org.eclipse.jetty.io.EofException: Early EOF > > at org.eclipse.jetty.server.HttpInput$3.getError(HttpInput.java:11= 26) > > at org.eclipse.jetty.server.HttpInput$3.noContent(HttpInput.java:1= 115) > > at org.eclipse.jetty.server.HttpInput.read(HttpInput.java:309) > > at > > > > org.apache.commons.io.input.ProxyInputStream.read(ProxyInputStream.java= :100) > > at sun.nio.cs.StreamDecoder.readBytes(StreamDecoder.java:284) > > at sun.nio.cs.StreamDecoder.implRead(StreamDecoder.java:326) > > at sun.nio.cs.StreamDecoder.read(StreamDecoder.java:178) > > at java.io.InputStreamReader.read(InputStreamReader.java:184) > > at org.noggit.JSONParser.fill(JSONParser.java:208) > > at org.noggit.JSONParser.getMore(JSONParser.java:215) > > at org.noggit.JSONParser.readStringChars2(JSONParser.java:709) > > at org.noggit.JSONParser.readStringChars(JSONParser.java:689) > > at org.noggit.JSONParser.getStringChars(JSONParser.java:1154) > > at org.noggit.JSONParser.getString(JSONParser.java:1142) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.pars= eSingleFieldValue(JsonLoader.java:637) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.pars= eArrayFieldValue(JsonLoader.java:667) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.pars= eNormalFieldValue(JsonLoader.java:625) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.pars= eExtendedFieldValue(JsonLoader.java:599) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.pars= eFieldValue(JsonLoader.java:557) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.pars= eDoc(JsonLoader.java:543) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.hand= leAdds(JsonLoader.java:500) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.proc= essUpdate(JsonLoader.java:145) > > at > > > > org.apache.solr.handler.loader.JsonLoader$SingleThreadedJsonLoader.load= (JsonLoader.java:121) > > at org.apache.solr.handler.loader.JsonLoader.load(JsonLoader.java:= 84) > > at > > > > org.apache.solr.handler.UpdateRequestHandler$1.load(UpdateRequestHandle= r.java:97) > > at > > > > org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(Cont= entStreamHandlerBase.java:68) > > at > > > > org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandler= Base.java:195) > > at org.apache.solr.core.SolrCore.execute(SolrCore.java:2503) > > at org.apache.solr.servlet.HttpSolrCall.execute(HttpSolrCall.java:= 711) > > at org.apache.solr.servlet.HttpSolrCall.call(HttpSolrCall.java:517= ) > > at > > > > org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.= java:384) > > at > > > > org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.= java:330) > > at > > > > org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHa= ndler.java:1629) > > at > > org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:5= 33) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.jav= a:143) > > at > > org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:= 548) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler= .java:190) > > at > > > > org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler= .java:1595) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler= .java:188) > > at > > > > org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler= .java:1253) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.= java:168) > > at > > org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:47= 3) > > at > > > > org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.= java:1564) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.= java:166) > > at > > > > org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.= java:1155) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.jav= a:141) > > at > > > > org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(Contex= tHandlerCollection.java:219) > > at > > > > org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollec= tion.java:126) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at > > > > org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.= java:335) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at org.eclipse.jetty.server.Server.handle(Server.java:530) > > at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:34= 7) > > at > > org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:= 256) > > at > > org.eclipse.jetty.io > > .AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279) > > at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:10= 2) > > at org.eclipse.jetty.io > > .ChannelEndPoint$2.run(ChannelEndPoint.java:124) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhat= YouKill.java:247) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYo= uKill.java:140) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKil= l.java:131) > > at > > > > org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run= (ReservedThreadExecutor.java:382) > > at > > > > org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.= java:708) > > at > > > > org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.j= ava:626) > > at java.lang.Thread.run(Thread.java:748) > > > > 2019-02-12 08:43:01.599 INFO (qtp2137589296-19) [ x:COSBIBioIndex] > > o.a.s.c.SolrCore [COSBIBioIndex] CLOSING SolrCore > > org.apache.solr.core.SolrCore@44e058fb > > 2019-02-12 08:43:01.600 INFO (qtp2137589296-19) [ x:COSBIBioIndex] > > o.a.s.m.SolrMetricManager Closing metric reporters for > > registry=3Dsolr.core.COSBIBioIndex, tag=3D1155553531 > > 2019-02-12 08:43:01.600 INFO (qtp2137589296-19) [ x:COSBIBioIndex] > > o.a.s.u.DirectUpdateHandler2 Committing on IndexWriter close. > > 2019-02-12 08:43:01.600 INFO (qtp2137589296-19) [ x:COSBIBioIndex] > > o.a.s.u.SolrIndexWriter Calling setCommitData with > > IW:org.apache.solr.update.SolrIndexWriter@13750f6d commitCommandVersion= :0 > > 2019-02-12 08:43:02.915 ERROR (qtp2137589296-19) [ x:COSBIBioIndex] > > o.a.s.u.DirectUpdateHandler2 Error in final commit > > java.lang.NoClassDefFoundError: > > org/apache/lucene/index/BufferedUpdatesStream$ApplyDeletesResult > > at > > > > org.apache.lucene.index.BufferedUpdatesStream.closeSegmentStates(Buffer= edUpdatesStream.java:368) > > at > > > > org.apache.lucene.index.FrozenBufferedUpdates.finishApply(FrozenBuffere= dUpdates.java:402) > > at > > > > org.apache.lucene.index.FrozenBufferedUpdates.apply(FrozenBufferedUpdat= es.java:327) > > at > > > > org.apache.lucene.index.DocumentsWriter$ResolveUpdatesEvent.process(Doc= umentsWriter.java:740) > > at > > org.apache.lucene.index.IndexWriter.processEvents(IndexWriter.java:5106= ) > > at > > org.apache.lucene.index.IndexWriter.processEvents(IndexWriter.java:5096= ) > > at > > > > org.apache.lucene.index.IndexWriter.prepareCommitInternal(IndexWriter.j= ava:3258) > > at > > org.apache.lucene.index.IndexWriter.commitInternal(IndexWriter.java:345= 8) > > at org.apache.lucene.index.IndexWriter.commit(IndexWriter.java:342= 3) > > at > > > > org.apache.solr.update.DirectUpdateHandler2.closeWriter(DirectUpdateHan= dler2.java:875) > > at > > > > org.apache.solr.update.DefaultSolrCoreState.closeIndexWriter(DefaultSol= rCoreState.java:105) > > at > > > > org.apache.solr.update.DefaultSolrCoreState.close(DefaultSolrCoreState.= java:402) > > at > > > > org.apache.solr.update.SolrCoreState.decrefSolrCoreState(SolrCoreState.= java:83) > > at org.apache.solr.core.SolrCore.close(SolrCore.java:1564) > > at org.apache.solr.servlet.HttpSolrCall.destroy(HttpSolrCall.java:= 570) > > at > > > > org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.= java:402) > > at > > > > org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.= java:330) > > at > > > > org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHa= ndler.java:1629) > > at > > org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:5= 33) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.jav= a:143) > > at > > org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:= 548) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler= .java:190) > > at > > > > org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler= .java:1595) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler= .java:188) > > at > > > > org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler= .java:1253) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.= java:168) > > at > > org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:47= 3) > > at > > > > org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.= java:1564) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.= java:166) > > at > > > > org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.= java:1155) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.jav= a:141) > > at > > > > org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(Contex= tHandlerCollection.java:219) > > at > > > > org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollec= tion.java:126) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at > > > > org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.= java:335) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at org.eclipse.jetty.server.Server.handle(Server.java:530) > > at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:34= 7) > > at > > org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:= 256) > > at > > org.eclipse.jetty.io > > .AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279) > > at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:10= 2) > > at org.eclipse.jetty.io > > .ChannelEndPoint$2.run(ChannelEndPoint.java:124) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhat= YouKill.java:247) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYo= uKill.java:140) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKil= l.java:131) > > at > > > > org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run= (ReservedThreadExecutor.java:382) > > at > > > > org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.= java:708) > > at > > > > org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.j= ava:626) > > at java.lang.Thread.run(Thread.java:748) > > Caused by: java.lang.ClassNotFoundException: > > org.apache.lucene.index.BufferedUpdatesStream$ApplyDeletesResult > > at java.net.URLClassLoader.findClass(URLClassLoader.java:382) > > at java.lang.ClassLoader.loadClass(ClassLoader.java:424) > > at java.lang.ClassLoader.loadClass(ClassLoader.java:357) > > at > > > > org.eclipse.jetty.webapp.WebAppClassLoader.loadClass(WebAppClassLoader.= java:565) > > at java.lang.ClassLoader.loadClass(ClassLoader.java:357) > > ... 50 more > > 2019-02-12 08:43:02.920 ERROR (qtp2137589296-19) [ x:COSBIBioIndex] > > o.a.s.c.SolrCore java.lang.NoClassDefFoundError: > > org/apache/solr/core/ShutdownAwareDirectory > > at > > > > org.apache.solr.core.CachingDirectoryFactory.close(CachingDirectoryFact= ory.java:298) > > at > > > > org.apache.solr.core.CachingDirectoryFactory.closeCacheValue(CachingDir= ectoryFactory.java:264) > > at > > > > org.apache.solr.core.CachingDirectoryFactory.close(CachingDirectoryFact= ory.java:194) > > at org.apache.solr.core.SolrCore.close(SolrCore.java:1633) > > at org.apache.solr.servlet.HttpSolrCall.destroy(HttpSolrCall.java:= 570) > > at > > > > org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.= java:402) > > at > > > > org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.= java:330) > > at > > > > org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHa= ndler.java:1629) > > at > > org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:5= 33) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.jav= a:143) > > at > > org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:= 548) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler= .java:190) > > at > > > > org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler= .java:1595) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler= .java:188) > > at > > > > org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler= .java:1253) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.= java:168) > > at > > org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:47= 3) > > at > > > > org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.= java:1564) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.= java:166) > > at > > > > org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.= java:1155) > > at > > > > org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.jav= a:141) > > at > > > > org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(Contex= tHandlerCollection.java:219) > > at > > > > org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollec= tion.java:126) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at > > > > org.eclipse.jetty.rewrite.handler.RewriteHandler.handle(RewriteHandler.= java:335) > > at > > > > org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.j= ava:132) > > at org.eclipse.jetty.server.Server.handle(Server.java:530) > > at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:34= 7) > > at > > org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:= 256) > > at > > org.eclipse.jetty.io > > .AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:279) > > at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:10= 2) > > at org.eclipse.jetty.io > > .ChannelEndPoint$2.run(ChannelEndPoint.java:124) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhat= YouKill.java:247) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.produce(EatWhatYo= uKill.java:140) > > at > > > > org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKil= l.java:131) > > at > > > > org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run= (ReservedThreadExecutor.java:382) > > at > > > > org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.= java:708) > > at > > > > org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.j= ava:626) > > at java.lang.Thread.run(Thread.java:748) > > Caused by: java.lang.ClassNotFoundException: > > org.apache.solr.core.ShutdownAwareDirectory > > at java.net.URLClassLoader.findClass(URLClassLoader.java:382) > > at java.lang.ClassLoader.loadClass(ClassLoader.java:424) > > at java.lang.ClassLoader.loadClass(ClassLoader.java:357) > > at > > > > org.eclipse.jetty.webapp.WebAppClassLoader.loadClass(WebAppClassLoader.= java:565) > > at java.lang.ClassLoader.loadClass(ClassLoader.java:357) > > ... 40 more > > > > > > -- > > Danilo Tomasoni > > COSBI > > > > As for the European General Data Protection Regulation 2016/679 on the > > protection of natural persons with regard to the processing of personal > > data, we inform you that all the data we possess are object of treateme= nt > > in the respect of the normative provided for by the cited GDPR. > > > > It is your right to be informed on which of your data are used and how; > > you may ask for their correction, cancellation or you may oppose to the= ir > > use by written request sent by recorded delivery to The Microsoft Resea= rch > > =E2=80=93 University of Trento Centre for Computational and Systems Bio= logy Scarl, > > Piazza Manifattura 1, 38068 Rovereto (TN), Italy. > > > >