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From "Masanz, James J." <Masanz.Ja...@mayo.edu>
Subject RE: [VOTE] Apache cTAKES 3.0.0-incubating RC5 release
Date Mon, 21 Jan 2013 21:22:48 GMT
The models are in jars because the machine learning library that produces them creates a jar
per model. I'm not sure offhand if it is required to be that way. But the contents of the
jars are not something a person would modify directly. You might build a new model but that
would replace the jar.

As far as the compiled jars, thanks for making us aware of our misunderstanding!

-- James


> -----Original Message-----
> From: general-return-39329-Masanz.James=mayo.edu@incubator.apache.org
> [mailto:general-return-39329-Masanz.James=mayo.edu@incubator.apache.org]
> On Behalf Of Matt Franklin
> Sent: Monday, January 21, 2013 12:47 PM
> To: general@incubator.apache.org
> Subject: Re: [VOTE] Apache cTAKES 3.0.0-incubating RC5 release
> 
> On Mon, Jan 21, 2013 at 12:16 PM, Masanz, James J.
> <Masanz.James@mayo.edu> wrote:
> >
> > Regarding the comment about compiled jars in the source tree:
> >
> > The following jars, even though they are under src directories, contain
> resources (models), not Java classes.
> >
> > conll-2009-dev-shift-pop.jar
> > dummy.dep.mod.jar
> > mayo-dep.jar
> > wordnet-3.0-lemma-data.jar
> > dummy.srl.mod.jar
> > en_srl_ontonotes.jar
> > mayo-srl.jar
> > clearparser_models.jar
> >
> > degree_of/model.jar
> > em_pair/model.jar
> > modifier_extractor/model.jar
> >
> > Are there other jars you were referring to?
> 
> ./ctakes-assertion/lib/jcarafe-core_2.9.1-0.9.8.3.RC4.jar
> ./ctakes-assertion/lib/jcarafe-ext_2.9.1-0.9.8.3.RC4.jar
> ./ctakes-assertion/lib/med-facts-i2b2-1.2-SNAPSHOT.jar
> ./ctakes-assertion/lib/med-facts-zoner-1.1.jar
> ./ctakes-constituency-parser/lib/libsvm-2.91.jar
> ./ctakes-coreference/lib/commons-io-2.1.jar
> ./ctakes-coreference/lib/commons-lang3-3.0.1.jar
> ./ctakes-coreference/lib/Jama-1.0.2.jar
> ./ctakes-coreference/lib/libsvm-2.91.jar
> ./ctakes-dependency-parser/lib/args4j-2.0.16.jar
> ./ctakes-dependency-parser/lib/clearparser-0.33.jar
> ./ctakes-dependency-parser/lib/cleartk-util-0.8.1.jar
> ./ctakes-dependency-parser/lib/commons-io-2.0.1.jar
> ./ctakes-dependency-parser/lib/commons-lang-2.4.jar
> ./ctakes-dependency-parser/lib/commons-logging-1.1.1.jar
> ./ctakes-dependency-parser/lib/hppc-0.3.1.jar
> ./ctakes-dependency-parser/lib/uimafit-1.2.0.jar
> 
> These are just a few that exist in SVN. All dependencies that are compiled
> code need to be externally referenced.
> 
> As for the models, I don' think there is any issue in keeping them in
> jars, but the question is why?  Are they never going to evolve or change?
> Wouldn't you keep them as source and just package them as jars for use at
> runtime?  As I said, this is not an issue, I am just curious.
> 
> >
> > I will look at the NOTICE file this afternoon.
> >
> > Regards,
> > James Masanz
> >
> >
> >> -----Original Message-----
> >> From: general-return-39326-Masanz.James=mayo.edu@incubator.apache.org
> >> [mailto:general-return-39326-Masanz.James=mayo.edu@incubator.apache.o
> >> rg]
> >> On Behalf Of Masanz, James J.
> >> Sent: Monday, January 21, 2013 9:51 AM
> >> To: 'general@incubator.apache.org'
> >> Subject: RE: [VOTE] Apache cTAKES 3.0.0-incubating RC5 release
> >>
> >> The result of the VOTE for 3.0.0-incubating on the dev list is at
> >> http://mail-archives.apache.org/mod_mbox/incubator-ctakes-
> >> dev/201301.mbox/browser
> >>
> >> The source artifact can be found in
> >> http://people.apache.org/~chenpei/ctakes-3.0.0-incubating/rc5/target/
> >>
> >> I'll look at the jars and the root NOTICE file.
> >>
> >> Thanks for your review!
> >> -- James Masanz
> >>
> >> > -----Original Message-----
> >> > From:
> >> > general-return-39325-Masanz.James=mayo.edu@incubator.apache.org
> >> > [mailto:general-return-39325-Masanz.James=mayo.edu@incubator.apache
> >> > .or
> >> > g]
> >> > On Behalf Of Matt Franklin
> >> > Sent: Monday, January 21, 2013 7:42 AM
> >> > To: general@incubator.apache.org
> >> > Cc: ctakes-dev@incubator.apache.org
> >> > Subject: Re: [VOTE] Apache cTAKES 3.0.0-incubating RC5 release
> >> >
> >> > I have some issues with this release as it currently stands:
> >> >
> >> > * Where is the result of the VOTE thread on the dev list?
> >> > * Where is the source artifact?  The artifact linked in the vote
> >> > thread appears to be your convenience binary release.
> >> > * There are compiled jars in the source tree.  These need to be
> >> > externalized in some fashion.
> >> > * There are LICENSE & NOTICE files in individual project
> >> > directories that contain entries that don't appear in the root
> >> > NOTICE file.  If you intend on releasing the subcomponents
> >> > individually, this makes some sense; but I think that the entries
> >> > should be merged into the root NOTICE file
> >> >
> >> >
> >> > On Fri, Jan 18, 2013 at 9:39 AM, Coarr, Matt <mcoarr@mitre.org>
> wrote:
> >> > > Hi, we just need one more Incubator PMC vote for cTAKES version
> 3.0.
> >> > >
> >> > > Matt
> >> > >
> >> > >
> >> > > ---
> >> > > From: <Chen>, Pei <Pei.Chen@childrens.harvard.edu>
> >> > > Subject: Collecting IPMC votes
> >> > >
> >> > > Hi,
> >> > >
> >> > > This is a call for a vote on releasing the following candidate as
> >> > > Apache cTAKES 3.0.0-incubating.
> >> > > This will be our first release.
> >> > >
> >> > >
> >> > >
> >> > > A vote is also held on the developer mailing list:
> >> > > http://mail-archives.apache.org/mod_mbox/incubator-ctakes-dev/201
> >> > > 301
> >> > > .m
> >> > > box/b
> >> > > rowser
> >> > >
> >> > >
> >> > >
> >> > > For more detailed information on the changes/release notes,
> >> > > please
> >> > visit:
> >> > >
> >> > > https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=
> >> > > 123
> >> > > 13
> >> > > 621&v
> >> > > ersion=12322969
> >> > >
> >> > >
> >> > >
> >> > > The release was made using the cTAKES release process documented
> here:
> >> > > http://incubator.apache.org/ctakes/ctakes-release-guide.html
> >> > >
> >> > > The candidate is available at:
> >> > >
> >> > > http://people.apache.org/~chenpei/ctakes-3.0.0-incubating/rc5/tar
> >> > > get
> >> > > /a
> >> > > pache
> >> > > -ctakes-3.0.0-incubating-bin.tar.gz
> >> > > /.zip
> >> > >
> >> > >
> >> > >
> >> > > The tag to be voted on:
> >> > >
> >> > > http://svn.apache.org/repos/asf/incubator/ctakes/tags/ctakes-3.0.
> >> > > 0-i
> >> > > nc
> >> > > ubati
> >> > > ng-rc5/
> >> > >
> >> > >
> >> > >
> >> > > The MD5 checksum of the tarball can be found at:
> >> > >
> >> > > http://people.apache.org/~chenpei/ctakes-3.0.0-incubating/rc5/tar
> >> > > get
> >> > > /a
> >> > > pache
> >> > > -ctakes-3.0.0-incubating-bin.tar.gz.md5
> >> > > /.zip.md5
> >> > >
> >> > >
> >> > >
> >> > > The signature of the tarball can be found at:
> >> > >
> >> > > http://people.apache.org/~chenpei/ctakes-3.0.0-incubating/rc5/tar
> >> > > get /a pache -ctakes-3.0.0-incubating-bin.tar.gz.asc
> >> > > /.zip.asc
> >> > >
> >> > >
> >> > >
> >> > > Apache cTAKES' KEYS file, containing the PGP keys used to sign
> >> > > the
> >> > release:
> >> > >
> >> > > http://svn.apache.org/repos/asf/incubator/ctakes/tags/ctakes-3.0.
> >> > > 0-i
> >> > > nc
> >> > > ubati
> >> > > ng-rc5/KEYS
> >> > >
> >> > >
> >> > >
> >> > > Please vote on releasing these packages as Apache cTAKES 3.0.0-
> >> > incubating.
> >> > > The vote is open
> >> > > for at least the next 72 hours.
> >> > >
> >> > > Only votes from Incubator PMC are binding, but folks are welcome
> >> > > to check the release candidate and voice their approval or
> disapproval.
> >> > > The vote passes if at least three binding +1 votes are cast.
> >> > >
> >> > >
> >> > >
> >> > > [ ] +1 Release the packages as Apache cTAKES 3.0.0-incubating [ ]
> >> > > -1 Do not release the packages because...
> >> > >
> >> > > Thanks!
> >> > >
> >> > > Pei
> >> > >
> >> > > P.S. Here is my +1.
> >> > >
> >> >
> >> > -------------------------------------------------------------------
> >> > -- To unsubscribe, e-mail: general-unsubscribe@incubator.apache.org
> >> > For additional commands, e-mail: general-help@incubator.apache.org
> >>
> >>
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> >
> >
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> >
> 
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