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From: Steven Bethard <steven.bethard@Colorado.EDU>
To: "ctakes-dev@incubator.apache.org" <ctakes-dev@incubator.apache.org>
Date: Fri, 9 Nov 2012 12:16:13 -0700
Subject: Re: flow in Relation Extractor Aggregate
Thread-Topic: flow in Relation Extractor Aggregate
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On Nov 9, 2012, at 8:09 PM, "Masanz, James J." <Masanz.James@mayo.edu> wrot=
e:
> I see this
>=20
>                        <fixedFlow>
>                            <node>SimpleSegmentAnnotator</node>
>                            <node>SentenceDetectorAnnotator</node>
>                            <node>TokenizerAnnotator</node>
>                            <node>LvgAnnotator</node>
>                            <node>ContextDependentTokenizerAnnotator</node=
>
>                            <node>POSTagger</node>
>                            <node>ConstituencyParser</node>
>                            <node>ClearParserAE</node>
>                            <node>Chunker</node>
>                            <node>AdjustNounPhraseToIncludeFollowingNP</no=
de>
>                            <node>AdjustNounPhraseToIncludeFollowingPPNP</=
node>
>                            <node>LookupWindowAnnotator</node>
>                            <node>DictionaryLookupAnnotatorDB</node>
>                            <node>StatusAnnotator</node>
>                            <node>NegationAnnotator</node>
>                            <node>ExtractionPrepAnnotator</node>
>                        </fixedFlow>

I see that within the "RelationExtractorPreprocessor" sub-analysis engine. =
But for the overall analysisEngineMetaData I see the flow that I posted.

Steve

>=20
> To double check that my eclipse sync is working OK, I also looked here
> https://svn.apache.org/repos/asf/incubator/ctakes/trunk/ctakes-relation-e=
xtractor/desc/analysis_engine/RelationExtractorAggregate.xml
>=20
> -- James
>=20
>> -----Original Message-----
>> From: ctakes-dev-return-833-Masanz.James=3Dmayo.edu@incubator.apache.org
>> [mailto:ctakes-dev-return-833-
>> Masanz.James=3Dmayo.edu@incubator.apache.org] On Behalf Of Steven Bethar=
d
>> Sent: Friday, November 09, 2012 12:28 PM
>> To: ctakes-dev@incubator.apache.org
>> Subject: Re: flow in Relation Extractor Aggregate
>>=20
>> On Nov 9, 2012, at 6:30 PM, "Masanz, James J." <Masanz.James@mayo.edu>
>> wrote:
>>> The flow in RelationExtractorAggregate.xml (trunk) doesn't look right.
>> I don't see the relation extraction AEs within the flow. Am I missing
>> something?
>>=20
>> I see:
>>=20
>>            <fixedFlow>
>>                <node>RelationExtractorPreprocessor</node>
>>=20
>> <node>org.apache.ctakes.relationextractor.ae.ModifierExtractorAnnotator<
>> /node>
>>=20
>> <node>org.apache.ctakes.relationextractor.ae.DegreeOfRelationExtractorAn
>> notator</node>
>>=20
>> <node>org.apache.ctakes.relationextractor.ae.EntityMentionPairRelationEx
>> tractorAnnotator</node>
>>            </fixedFlow>
>>=20
>> Is that not what you see?
>>=20
>> Steve
>>=20
>> P.S. There's a test for the Modifier, DegreeOf and EntityMentionPair
>> descriptors, but I didn't know how to write a test for the
>> RelationExtractorAggregate descriptor given that you need a UMLS name
>> and password to be supplied and Jenkins won't know how to do that.