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From Steven Bethard <steven.beth...@Colorado.EDU>
Subject Re: flow in Relation Extractor Aggregate
Date Fri, 09 Nov 2012 19:16:13 GMT
On Nov 9, 2012, at 8:09 PM, "Masanz, James J." <Masanz.James@mayo.edu> wrote:
> I see this
> 
>                        <fixedFlow>
>                            <node>SimpleSegmentAnnotator</node>
>                            <node>SentenceDetectorAnnotator</node>
>                            <node>TokenizerAnnotator</node>
>                            <node>LvgAnnotator</node>
>                            <node>ContextDependentTokenizerAnnotator</node>
>                            <node>POSTagger</node>
>                            <node>ConstituencyParser</node>
>                            <node>ClearParserAE</node>
>                            <node>Chunker</node>
>                            <node>AdjustNounPhraseToIncludeFollowingNP</node>
>                            <node>AdjustNounPhraseToIncludeFollowingPPNP</node>
>                            <node>LookupWindowAnnotator</node>
>                            <node>DictionaryLookupAnnotatorDB</node>
>                            <node>StatusAnnotator</node>
>                            <node>NegationAnnotator</node>
>                            <node>ExtractionPrepAnnotator</node>
>                        </fixedFlow>

I see that within the "RelationExtractorPreprocessor" sub-analysis engine. But for the overall
analysisEngineMetaData I see the flow that I posted.

Steve

> 
> To double check that my eclipse sync is working OK, I also looked here
> https://svn.apache.org/repos/asf/incubator/ctakes/trunk/ctakes-relation-extractor/desc/analysis_engine/RelationExtractorAggregate.xml
> 
> -- James
> 
>> -----Original Message-----
>> From: ctakes-dev-return-833-Masanz.James=mayo.edu@incubator.apache.org
>> [mailto:ctakes-dev-return-833-
>> Masanz.James=mayo.edu@incubator.apache.org] On Behalf Of Steven Bethard
>> Sent: Friday, November 09, 2012 12:28 PM
>> To: ctakes-dev@incubator.apache.org
>> Subject: Re: flow in Relation Extractor Aggregate
>> 
>> On Nov 9, 2012, at 6:30 PM, "Masanz, James J." <Masanz.James@mayo.edu>
>> wrote:
>>> The flow in RelationExtractorAggregate.xml (trunk) doesn't look right.
>> I don't see the relation extraction AEs within the flow. Am I missing
>> something?
>> 
>> I see:
>> 
>>            <fixedFlow>
>>                <node>RelationExtractorPreprocessor</node>
>> 
>> <node>org.apache.ctakes.relationextractor.ae.ModifierExtractorAnnotator<
>> /node>
>> 
>> <node>org.apache.ctakes.relationextractor.ae.DegreeOfRelationExtractorAn
>> notator</node>
>> 
>> <node>org.apache.ctakes.relationextractor.ae.EntityMentionPairRelationEx
>> tractorAnnotator</node>
>>            </fixedFlow>
>> 
>> Is that not what you see?
>> 
>> Steve
>> 
>> P.S. There's a test for the Modifier, DegreeOf and EntityMentionPair
>> descriptors, but I didn't know how to write a test for the
>> RelationExtractorAggregate descriptor given that you need a UMLS name
>> and password to be supplied and Jenkins won't know how to do that.


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