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From: Steven Bethard <steven.bethard@Colorado.EDU>
To: "ctakes-dev@incubator.apache.org" <ctakes-dev@incubator.apache.org>
Date: Thu, 11 Oct 2012 08:48:45 -0600
Subject: Re: Update cTAKES Building and Running page?
Thread-Topic: Update cTAKES Building and Running page?
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On Oct 11, 2012, at 8:29 AM, Oleg Tikhonov <oleg@apache.org> wrote:
> I've svn'ed the source and tryed to mvn clean install.

Are you sure you want to run `mvn install`? In my experience you almost *ne=
ver* want to do that.

If you just want to compile the source, why not use `mvn compile`?

If you want to run the tests too, run `mvn test`.

If you want to compile, run tests and build jar files, run `mvn package`.

If the tests are failing, but you still want to build the jar files, you ca=
n add -DskipTests=3Dtrue to the command line (http://maven.apache.org/plugi=
ns/maven-surefire-plugin/test-mojo.html#skipTests). (This will also work fo=
r `mvn install` if you're really sure that's what you want to run.)

All that said, I can confirm that I also see test failures:

-------------------------------------------------------
 T E S T S
-------------------------------------------------------
Running org.apache.ctakes.core.ae.SimpleSegmentAnnotatorTests
=85
Caused by: org.apache.uima.cas.CASRuntimeException: JCas type "org.apache.c=
takes.typesystem.type.textspan.Segment" used in Java code,  but was not dec=
lared in the XML type descriptor.
	at org.apache.uima.jcas.impl.JCasImpl.getType(JCasImpl.java:412)
	at org.apache.uima.jcas.cas.TOP.<init>(TOP.java:92)
	at org.apache.uima.jcas.cas.AnnotationBase.<init>(AnnotationBase.java:53)
	at org.apache.uima.jcas.tcas.Annotation.<init>(Annotation.java:54)
	at org.apache.ctakes.typesystem.type.textspan.Segment.<init>(Segment.java:=
46)
	at org.apache.ctakes.core.ae.SimpleSegmentAnnotator.process(SimpleSegmentA=
nnotator.java:54)
	at org.apache.uima.analysis_component.JCasAnnotator_ImplBase.process(JCasA=
nnotator_ImplBase.java:48)
	at org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.callA=
nalysisComponentProcess(PrimitiveAnalysisEngine_impl.java:375)
	... 34 more
Running org.apache.ctakes.core.ci.HyphenTextModifierImplTests
=85
java.io.FileNotFoundException: resources/tokenizer/hyphenated.txt (No such =
file or directory)
	at java.io.FileInputStream.open(Native Method)
	at java.io.FileInputStream.<init>(FileInputStream.java:120)
	at java.io.FileReader.<init>(FileReader.java:55)
	at org.apache.ctakes.core.ci.HyphenTextModifierImpl.<init>(HyphenTextModif=
ierImpl.java:66)
...
Results :

Failed tests:   testTokenizerAnnotatorPTB(org.apache.ctakes.core.ae.Tokeniz=
erAnnotatorPTBTests): expected:<class org.apache.ctakes.typesystem.type.syn=
tax.NumToken> but was:<class org.apache.ctakes.typesystem.type.syntax.Punct=
uationToken>
  testTest(org.apache.ctakes.core.ci.HyphenTextModifierImplTests)

Tests in error:=20
  testSimpleSegment(org.apache.ctakes.core.ae.SimpleSegmentAnnotatorTests):=
 Annotator processing failed.   =20

Tests run: 3, Failures: 2, Errors: 1, Skipped: 0

Steve