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From "Chen, Pei" <Pei.C...@childrens.harvard.edu>
Subject RE: build problem
Date Wed, 10 Oct 2012 16:11:12 GMT
I think Dima is correct here... It looks like something broke in build..
To detect these types of issues ahead of time, I setup continuous integration last night (This
will become important as we have more committers):

See below for status on an Ubutu machine:
https://builds.apache.org/job/cTAKES-trunk/2/console
[Email notifications will come automatically to ctakes-dev@ when a build breaks now]

<- in the middle of some code changes; would be great if someone could confirm if something
weird is going on with builds on Ubuntu or something really broke with the lastest checkin's.

--Pei

> -----Original Message-----
> From: Dmitriy Dligach [mailto:dmitriy.dligach@childrens.harvard.edu]
> Sent: Wednesday, October 10, 2012 11:52 AM
> To: ctakes-dev@incubator.apache.org
> Subject: Re: build problem
> 
> Sorry. Here it is:
> 
> 
> [INFO]
> ------------------------------------------------------------------------
> [INFO] Reactor Summary:
> [INFO]
> [INFO] cTAKES ............................................ SUCCESS [0.496s] [INFO] Apache
> cTAKES common type system .................. SUCCESS [5.212s] [INFO] Apache
> cTAKES utils ............................... SUCCESS [0.255s] [INFO] Apache cTAKES
> core ................................ SUCCESS [0.312s] [INFO] Apache cTAKES part-of-
> speech tagger ............... SUCCESS [0.240s] [INFO] Apache cTAKES chunker
> ............................. SUCCESS [0.267s] [INFO] Apache cTAKES document
> preprocessor ............... SUCCESS [0.404s] [INFO] Apache cTAKES dictionary
> lookup ................... SUCCESS [0.789s] [INFO] Apache cTAKES context
> dependent tokenizer ......... SUCCESS [0.194s] [INFO] Apache cTAKES LVG
> lexical tools ................... SUCCESS [0.234s] [INFO] Apache cTAKES named
> entity contexts ............... SUCCESS [0.185s] [INFO] Apache cTAKES
> Constituency Parser ................. SUCCESS [11.004s] [INFO] Apache cTAKES
> CoReference Resolver ................ SUCCESS [2.009s] [INFO] Apache cTAKES
> Drug NER ............................ SUCCESS [3.798s] [INFO] Apache cTAKES Side
> Effects ........................ SUCCESS [2.474s] [INFO] Apache cTAKES Smoking
> Status ...................... FAILURE [0.326s] [INFO] Apache cTAKES Dependency
> Parser ................... SKIPPED [INFO] Apache cTAKES Relation Extractor
> .................. SKIPPED [INFO] Apache cTAKES Assertion ...........................
> SKIPPED [INFO] Apache cTAKES ctakes-clinical-pipeline ............ SKIPPED
> [INFO] Apache cTAKES Pad Term Spotter .................... SKIPPED [INFO]
> ------------------------------------------------------------------------
> [INFO] BUILD FAILURE
> [INFO]
> ------------------------------------------------------------------------
> [INFO] Total time: 28.930s
> [INFO] Finished at: Wed Oct 10 11:50:48 EDT 2012 [INFO] Final Memory:
> 20M/202M [INFO]
> ------------------------------------------------------------------------
> [ERROR] Failed to execute goal
> org.codehaus.mojo:exec-maven-plugin:1.2.1:java
> (run-jcasgen-ctakes-smoking-status) on project ctakes-smoking-status: An
> exception occured while executing the Java class. null:
> InvocationTargetException: An import could not be resolved.  No .xml file
> with name "org.apache.ctakes.smokingstatus.types.I2B2TypeSystem"
> was found in the class path or data path. (Descriptor:
> file:/home/dima/workspaces/apache/ctakes/ctakes-smoking-
> status/target/classes/org/apache/ctakes/smokingstatus/types/TypeSystem.
> xml)
> -> [Help 1]
> 
> 
> On 10/10/2012 11:49 AM, Steven Bethard wrote:
> > On Oct 10, 2012, at 9:40 AM, Dmitriy Dligach
> <dmitriy.dligach@childrens.harvard.edu> wrote:
> >> I am trying to check out cTAKES and build it but I am getting a build
> >> error. Maven stumbles on the smoking-status module. I think the
> >> problem is in TypeSystem.xml file in the smoking-status module. Maven
> >> has problems importing the common type system, i.e.:
> >>
> >>      <import name="org.apache.ctakes.typesystem.types.TypeSystem"/>
> > Can you paste the error you're getting?
> >
> > Steve


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