incubator-ctakes-dev mailing list archives

Site index · List index
Message view « Date » · « Thread »
Top « Date » · « Thread »
From "Chen, Pei" <Pei.C...@childrens.harvard.edu>
Subject RE: location for SHARP Knowtator reader?
Date Fri, 05 Oct 2012 16:53:04 GMT
Thanks Steve.
Would you mind also running 
mvn license:check and to format headers- license:format 
on the project(s) to verify the ASF License headers for any new files?

We'll see if we could start making the type system changes as soon as 3.0.0-incubating looks
fairly stable with just all of the refactoring, namespaces, maven integration.

> -----Original Message-----
> From: Steven Bethard [mailto:steven.bethard@Colorado.EDU]
> Sent: Thursday, October 04, 2012 10:40 PM
> To: ctakes-dev@incubator.apache.org
> Subject: Re: location for SHARP Knowtator reader?
> 
> The code is now here:
> 
> ctakes-
> core/src/main/java/org/apache/ctakes/core/ae/SHARPKnowtatorXMLReade
> r.java
> ctakes-
> core/src/main/java/org/apache/ctakes/core/knowtator/KnowtatorAnnotati
> on.java
> ctakes-
> core/src/main/java/org/apache/ctakes/core/knowtator/KnowtatorXMLPars
> er.java
> 
> I worked for a bit on filling in Knowtator/UIMA mappings in
> SHARPKnowtatorXMLReader, but it's pretty tough, particularly without the
> updates to the type system to add Generic, Conditional, Uncertainty, etc.
> 
> You can get a flavor for many of the changes that need to be made to the
> type system by scanning through all the TODO notes in that file...
> 
> Steve
> 
> 
> On Oct 2, 2012, at 12:38 PM, "Chen, Pei" <Pei.Chen@childrens.harvard.edu>
> wrote:
> 
> > Either ctakes-core or ctakes-utils seems appropriate...
> >
> > --Pei
> >
> >> -----Original Message-----
> >> From: Masanz, James J. [mailto:Masanz.James@mayo.edu]
> >> Sent: Tuesday, October 02, 2012 2:30 PM
> >> To: 'ctakes-dev@incubator.apache.org'
> >> Subject: RE: location for SHARP Knowtator reader?
> >>
> >>
> >> +1 for ctakes-core
> >>
> >>
> >>> -----Original Message-----
> >>> From: ctakes-dev-return-477-
> >> Masanz.James=mayo.edu@incubator.apache.org
> >>> [mailto:ctakes-dev-return-477-
> >> Masanz.James=mayo.edu@incubator.apache.o
> >>> rg]
> >>> On Behalf Of Steven Bethard
> >>> Sent: Tuesday, October 02, 2012 12:54 PM
> >>> To: ctakes-dev@incubator.apache.org
> >>> Subject: location for SHARP Knowtator reader?
> >>>
> >>> Now that we've finally got the Apache repository working, I'd like
> >>> to add the code for reading Knowtator XML annotations into the UIMA
> >>> type
> >> system.
> >>> There are basically two pieces of this code, a generic parser for
> >>> reading Knowtator XML files, and an AnalysisEngine that reads the
> >>> Knowtator XML files created from the SHARP project and maps them to
> >>> the cTAKES type
> >>> system:
> >>>
> >>> https://github.com/bethard/ctakes-
> >>>
> >>
> temporal/blob/master/src/main/java/org/apache/ctakes/knowtator/Knowt
> >> at
> >>> orXM
> >>> LParser.java
> >>> https://github.com/bethard/ctakes-
> >>>
> >>
> temporal/blob/master/src/main/java/org/apache/ctakes/sharp/ae/Knowtat
> >> o
> >>> rXML
> >>> Reader.java
> >>>
> >>> Where should these go? Maybe ctakes-core? The dependencies are
> only
> >>> the ctakes-type-system and JDOM.
> >>>
> >>> Steve


Mime
View raw message