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From james-mas...@apache.org
Subject svn commit: r1434586 - /incubator/ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/ae/SHARPKnowtatorXMLReader.java
Date Thu, 17 Jan 2013 08:22:12 GMT
Author: james-masanz
Date: Thu Jan 17 08:22:12 2013
New Revision: 1434586

URL: http://svn.apache.org/viewvc?rev=1434586&view=rev
Log:
as part of: CTAKES-69: finish conditional  negation (polarity) uncertainty,and start on converting
from supporting EntityMention to IdentifiedAnnotation

Modified:
    incubator/ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/ae/SHARPKnowtatorXMLReader.java

Modified: incubator/ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/ae/SHARPKnowtatorXMLReader.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/ae/SHARPKnowtatorXMLReader.java?rev=1434586&r1=1434585&r2=1434586&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/ae/SHARPKnowtatorXMLReader.java
(original)
+++ incubator/ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/ae/SHARPKnowtatorXMLReader.java
Thu Jan 17 08:22:12 2013
@@ -58,6 +58,7 @@ import org.apache.ctakes.typesystem.type
 import org.apache.ctakes.typesystem.type.textsem.EntityMention;
 import org.apache.ctakes.typesystem.type.textsem.EventMention;
 import org.apache.ctakes.typesystem.type.textsem.GenericModifier;
+import org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation;
 import org.apache.ctakes.typesystem.type.textsem.Modifier;
 import org.apache.ctakes.typesystem.type.textsem.SubjectModifier;
 import org.apache.ctakes.typesystem.type.textsem.TimeMention;
@@ -1307,13 +1308,15 @@ public class SHARPKnowtatorXMLReader ext
     }
   }
 
-  private static class ConditionalFeature extends DelayedFeature<EntityMention> {
-    public ConditionalFeature(EntityMention entityMention, KnowtatorAnnotation value) {
-      super(entityMention, value);
+  private static class ConditionalFeature extends DelayedFeature<IdentifiedAnnotation>
{
+    public ConditionalFeature(IdentifiedAnnotation identifiedAnnotation, KnowtatorAnnotation
value) {
+      super(identifiedAnnotation, value);
     }
     @Override
     protected void setValue(TOP valueAnnotation) {
-      // TODO: this.annotation.setConditional(...)
+      Modifier conditionalModifier = (Modifier) valueAnnotation;
+      boolean conditional = conditionalModifier.getConditional();
+      this.annotation.setConditional(conditional);
     }
   }
 
@@ -1335,9 +1338,9 @@ public class SHARPKnowtatorXMLReader ext
   //     <mentionSlot id="generic_normalization" />
   //     <booleanSlotMentionValue value="true" />
   //   </booleanSlotMention>
-  private static class GenericFeature extends DelayedFeature<EntityMention> {
-    public GenericFeature(EntityMention entityMention, KnowtatorAnnotation value) {
-      super(entityMention, value);
+  private static class GenericFeature extends DelayedFeature<IdentifiedAnnotation>
{
+    public GenericFeature(IdentifiedAnnotation identifiedAnnotation, KnowtatorAnnotation
value) {
+      super(identifiedAnnotation, value);
     }
     @Override
     protected void setValue(TOP valueAnnotation) {
@@ -1478,13 +1481,15 @@ public class SHARPKnowtatorXMLReader ext
     }
   }
 
-  private static class NegationFeature extends DelayedFeature<EntityMention> {
-    public NegationFeature(EntityMention entityMention, KnowtatorAnnotation value) {
-      super(entityMention, value);
+  private static class NegationFeature extends DelayedFeature<IdentifiedAnnotation>
{
+    public NegationFeature(IdentifiedAnnotation identifiedAnnotation, KnowtatorAnnotation
value) {
+      super(identifiedAnnotation, value);
     }
     @Override
     protected void setValue(TOP valueAnnotation) {
-      // TODO: this.annotation.setNegation(...)
+        Modifier negationModifier = (Modifier) valueAnnotation;
+        int negation = negationModifier.getPolarity();
+        this.annotation.setPolarity(negation);
     }
   }
   
@@ -1518,9 +1523,9 @@ public class SHARPKnowtatorXMLReader ext
     }
   }
   
-  private static class SubjectFeature extends DelayedFeature<EntityMention> {
-    public SubjectFeature(EntityMention entityMention, KnowtatorAnnotation value) {
-      super(entityMention, value);
+  private static class SubjectFeature extends DelayedFeature<IdentifiedAnnotation>
{
+    public SubjectFeature(IdentifiedAnnotation identifiedAnnotation, KnowtatorAnnotation
value) {
+      super(identifiedAnnotation, value);
     }
     @Override
     protected void setValue(TOP valueAnnotation) {
@@ -1531,13 +1536,15 @@ public class SHARPKnowtatorXMLReader ext
     }
   }
   
-  private static class UncertaintyFeature extends DelayedFeature<EntityMention> {
-    public UncertaintyFeature(EntityMention entityMention, KnowtatorAnnotation value) {
-      super(entityMention, value);
+  private static class UncertaintyFeature extends DelayedFeature<IdentifiedAnnotation>
{
+    public UncertaintyFeature(IdentifiedAnnotation identifiedAnnotation, KnowtatorAnnotation
value) {
+      super(identifiedAnnotation, value);
     }
     @Override
     protected void setValue(TOP valueAnnotation) {
-      // TODO: this.annotation.setUncertainty(...)
+      Modifier uncertaintyModifier = (Modifier) valueAnnotation;
+      int uncertainty = uncertaintyModifier.getUncertainty();
+      this.annotation.setUncertainty(uncertainty);
     }
   }
   



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