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From build...@apache.org
Subject svn commit: r840768 - in /websites/staging/ctakes/trunk/content: ./ ctakes/components.html
Date Tue, 04 Dec 2012 22:11:44 GMT
Author: buildbot
Date: Tue Dec  4 22:11:43 2012
New Revision: 840768

Log:
Staging update by buildbot for ctakes

Modified:
    websites/staging/ctakes/trunk/content/   (props changed)
    websites/staging/ctakes/trunk/content/ctakes/components.html

Propchange: websites/staging/ctakes/trunk/content/
------------------------------------------------------------------------------
--- cms:source-revision (original)
+++ cms:source-revision Tue Dec  4 22:11:43 2012
@@ -1 +1 @@
-1417005
+1417219

Modified: websites/staging/ctakes/trunk/content/ctakes/components.html
==============================================================================
--- websites/staging/ctakes/trunk/content/ctakes/components.html (original)
+++ websites/staging/ctakes/trunk/content/ctakes/components.html Tue Dec  4 22:11:43 2012
@@ -89,13 +89,15 @@
 <p>Apache OpenNLP technology with a model trained on manually annotated clinical data
 (see Savova et al, 2010)</p>
 <h3 id="tokenization">Tokenization</h3>
-<p>(rule-based) (see Savova et al, 2010)</p>
-<h3 id="morphologic-normalization-national-library-of-medicines-lexical-variant-generation-tool">Morphologic
normalization (National Library of Medicine's Lexical Variant Generation tool</h3>
-<p>http://www.nlm.nih.gov/research/umls/new_users/online_learning/LEX_004.htm</p>
+<p>Rule-based (see Savova et al, 2010)</p>
+<h3 id="morphologic-normalization-national-library-of-medicines-lexical-variant-generation-tool">Morphologic
normalization (National Library of Medicine's Lexical Variant Generation tool)</h3>
+<p><a href="http://www.nlm.nih.gov/research/umls/new_users/online_learning/LEX_004.htm">http://www.nlm.nih.gov/research/umls/new_users/online_learning/LEX_004.htm</a></p>
 <h3 id="pos-tagging">POS tagging</h3>
-<p>Apache OpenNLP technology with a model trained on manually annotated clinical data)
(see Savova et al, 2010; upcoming 2013 publication</p>
+<p>Apache OpenNLP technology with a model trained on manually annotated clinical data
+(see Savova et al, 2010; upcoming 2013 publication)</p>
 <h3 id="shallow-parsing">Shallow parsing</h3>
-<p>(Apache OpenNLP technology with a model trained on manually annotated clinical data)
(see Savova et al, 2010)</p>
+<p>Apache OpenNLP technology with a model trained on manually annotated clinical data
+(see Savova et al, 2010)</p>
 <h3 id="named-entity-recognition-see-savova-et-al-2010">Named Entity Recognition (see
Savova et al, 2010)</h3>
 <ul>
 <li>Dictionary mapping (lookup algorithm)</li>
@@ -112,11 +114,11 @@
 <h3 id="co-reference-resolver">Co-reference resolver</h3>
 <p>Resolves co-referring entities. (machine learning with a model trained on manually
annotated clinical data) (see Zheng et al, 2011)</p>
 <h3 id="relation-extractor">Relation extractor</h3>
-<p>discovers such attributes as the location and the severity of a clinical condition
(machine learning with a model trained on manually annotated clinical data) (upcoming 2013
publication)</p>
+<p>Discovers attributes such as the location and the severity of a clinical condition
(machine learning with a model trained on manually annotated clinical data) (upcoming 2013
publication)</p>
 <h3 id="drug-profile-module">Drug Profile module</h3>
-<p>discovers drug-specific attributes such as dosage, duration, form, frequency, route,
strength (see Sohn et al, 2010; Savova et al, 2011)</p>
+<p>Discovers drug-specific attributes such as dosage, duration, form, frequency, route,
strength (see Sohn et al, 2010; Savova et al, 2011)</p>
 <h3 id="smoking-status-classifier">Smoking status classifier</h3>
-<p>past smoker, current smoker, non-smoker, smoker, unknown (see Savova et al, 2008)</p>
+<p>Classifies document/patient as past smoker, current smoker, non-smoker, smoker,
unknown (see Savova et al, 2008)</p>
 <h1 id="select-publications">Select Publications:</h1>
 <p>Choi J, Palmer M. Getting the most out of Transition-based Dependency Parsing. 46th
Annual Meeting of the Association for Computational Linguistics: Human Language Technologies,.
Portland, OR.: ACL-HLT 2011a , 2011.</p>
 <p>Choi J, Palmer M. Transition-based Semantic Role Labeling Using Predicate Argument
Clustering. RELMS 2011: Relational Models of Semantics, held in conjunction with ACL-HLT 2011.
Portland, OR, 2011b.</p>



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