Return-Path: X-Original-To: apmail-incubator-ctakes-commits-archive@minotaur.apache.org Delivered-To: apmail-incubator-ctakes-commits-archive@minotaur.apache.org Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by minotaur.apache.org (Postfix) with SMTP id 1974FD5B9 for ; Thu, 20 Sep 2012 16:09:41 +0000 (UTC) Received: (qmail 12631 invoked by uid 500); 20 Sep 2012 16:09:41 -0000 Delivered-To: apmail-incubator-ctakes-commits-archive@incubator.apache.org Received: (qmail 12606 invoked by uid 500); 20 Sep 2012 16:09:40 -0000 Mailing-List: contact ctakes-commits-help@incubator.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: ctakes-dev@incubator.apache.org Delivered-To: mailing list ctakes-commits@incubator.apache.org Received: (qmail 12592 invoked by uid 99); 20 Sep 2012 16:09:40 -0000 Received: from athena.apache.org (HELO athena.apache.org) (140.211.11.136) by apache.org (qpsmtpd/0.29) with ESMTP; Thu, 20 Sep 2012 16:09:40 +0000 X-ASF-Spam-Status: No, hits=-2000.0 required=5.0 tests=ALL_TRUSTED X-Spam-Check-By: apache.org Received: from [140.211.11.4] (HELO eris.apache.org) (140.211.11.4) by apache.org (qpsmtpd/0.29) with ESMTP; Thu, 20 Sep 2012 16:09:36 +0000 Received: from eris.apache.org (localhost [127.0.0.1]) by eris.apache.org (Postfix) with ESMTP id D4AB82388B46; Thu, 20 Sep 2012 16:08:17 +0000 (UTC) Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit Subject: svn commit: r1388092 [10/22] - in /incubator/ctakes/trunk: ./ ctakes-chunker/ ctakes-chunker/desc/ ctakes-chunker/scripts/groovy/data/chunk/ ctakes-chunker/scripts/java/data/chunk/ ctakes-chunker/scripts/java/data/chunk/genia/ ctakes-chunker/src/main/j... Date: Thu, 20 Sep 2012 16:07:33 -0000 To: ctakes-commits@incubator.apache.org From: chenpei@apache.org X-Mailer: svnmailer-1.0.8-patched Message-Id: <20120920160817.D4AB82388B46@eris.apache.org> X-Virus-Checked: Checked by ClamAV on apache.org Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/PairAttributeCalculator.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/PairAttributeCalculator.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/PairAttributeCalculator.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/PairAttributeCalculator.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Jiaping Zheng - * @author Tim Miller +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package edu.mayo.bmi.coref.util; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/ParentPtrTree.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/ParentPtrTree.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/ParentPtrTree.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/ParentPtrTree.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Jiaping Zheng - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package edu.mayo.bmi.coref.util; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/SvmUtils.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/SvmUtils.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/SvmUtils.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/SvmUtils.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - - @author Tim Miller - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package edu.mayo.bmi.coref.util; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/SvmVectorCreator.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/SvmVectorCreator.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/SvmVectorCreator.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/SvmVectorCreator.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Tim Miller - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package edu.mayo.bmi.coref.util; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/SyntaxAttributeCalculator.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/SyntaxAttributeCalculator.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/SyntaxAttributeCalculator.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/SyntaxAttributeCalculator.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - - @author Tim Miller - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package edu.mayo.bmi.coref.util; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/TextMatch.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/TextMatch.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/TextMatch.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/TextMatch.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - - - * @author Jiaping Zheng +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package edu.mayo.bmi.coref.util; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/ThreadDelegator.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/ThreadDelegator.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/ThreadDelegator.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/edu/mayo/bmi/coref/util/ThreadDelegator.java Thu Sep 20 16:07:04 2012 @@ -1,3 +1,21 @@ +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. + */ package edu.mayo.bmi.coref.util; import org.chboston.cnlp.ctakes.coref.treekernel.training.RowFillerThread; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/B3Type.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/B3Type.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/B3Type.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/B3Type.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - - @author Jiaping Zheng - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.eval.helpers; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/CEAFType.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/CEAFType.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/CEAFType.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/CEAFType.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Jiaping Zheng - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.eval.helpers; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/KAlphaType.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/KAlphaType.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/KAlphaType.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/KAlphaType.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Jiaping Zheng - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.eval.helpers; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/MatType.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/MatType.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/MatType.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/MatType.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Jiaping Zheng - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.eval.helpers; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/PairType.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/PairType.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/PairType.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/PairType.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - - @author Jiaping Zheng - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.eval.helpers; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/Span.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/Span.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/Span.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/Span.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Jiaping Zheng - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.eval.helpers; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/SpanAlignment.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/SpanAlignment.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/SpanAlignment.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/SpanAlignment.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Jiaping Zheng - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.eval.helpers; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/SpanOffsetComparator.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/SpanOffsetComparator.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/SpanOffsetComparator.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/SpanOffsetComparator.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Jiaping Zheng - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.eval.helpers; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/Test.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/Test.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/Test.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/eval/helpers/Test.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Jiaping Zheng - * +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.eval.helpers; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/KernelMatrixCompositor.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/KernelMatrixCompositor.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/KernelMatrixCompositor.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/KernelMatrixCompositor.java Thu Sep 20 16:07:04 2012 @@ -1,3 +1,21 @@ +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. + */ package org.chboston.cnlp.ctakes.coref.treekernel.training; import java.io.File; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/LinearKernelMatrixWriter.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/LinearKernelMatrixWriter.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/LinearKernelMatrixWriter.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/LinearKernelMatrixWriter.java Thu Sep 20 16:07:04 2012 @@ -1,3 +1,21 @@ +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. + */ package org.chboston.cnlp.ctakes.coref.treekernel.training; import java.io.File; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/RowFillerThread.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/RowFillerThread.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/RowFillerThread.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/RowFillerThread.java Thu Sep 20 16:07:04 2012 @@ -1,3 +1,21 @@ +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. + */ package org.chboston.cnlp.ctakes.coref.treekernel.training; import java.util.ArrayList; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/TreeKernelTrainer.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/TreeKernelTrainer.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/TreeKernelTrainer.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/treekernel/training/TreeKernelTrainer.java Thu Sep 20 16:07:04 2012 @@ -1,3 +1,21 @@ +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. + */ package org.chboston.cnlp.ctakes.coref.treekernel.training; import java.io.File; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqMarkableCreator.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqMarkableCreator.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqMarkableCreator.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqMarkableCreator.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Jiaping Zheng - * @author Tim Miller +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.uima.ae; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqMarkableExpander.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqMarkableExpander.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqMarkableExpander.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqMarkableExpander.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - - @author Jiaping Zheng - * @author Tim Miller +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.uima.ae; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqMarkablePairGenerator.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqMarkablePairGenerator.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqMarkablePairGenerator.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqMarkablePairGenerator.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Jiaping Zheng - * @author Tim Miller +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.uima.ae; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqSvmChainCreator.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqSvmChainCreator.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqSvmChainCreator.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/ae/MipacqSvmChainCreator.java Thu Sep 20 16:07:04 2012 @@ -1,18 +1,20 @@ -/* Copyright 2011 Children's Hospital Boston - Licensed under the Apache License, Version 2.0 (the "License"); - you may not use this file except in compliance with the License. - You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - - Unless required by applicable law or agreed to in writing, software - distributed under the License is distributed on an "AS IS" BASIS, - WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - See the License for the specific language governing permissions and - limitations under the License. - -@author Jiaping Zheng - * @author Tim Miller +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. */ package org.chboston.cnlp.ctakes.coref.uima.ae; Modified: incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/cc/ODIEVectorFileWriter.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/cc/ODIEVectorFileWriter.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/cc/ODIEVectorFileWriter.java (original) +++ incubator/ctakes/trunk/ctakes-coreference/src/main/java/org/chboston/cnlp/ctakes/coref/uima/cc/ODIEVectorFileWriter.java Thu Sep 20 16:07:04 2012 @@ -1,3 +1,21 @@ +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. + */ package org.chboston.cnlp.ctakes.coref.uima.cc; import java.io.BufferedReader; Modified: incubator/ctakes/trunk/ctakes-dependency-parser/.classpath URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/.classpath?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/.classpath (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/.classpath Thu Sep 20 16:07:04 2012 @@ -1,27 +1,8 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserAE.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserAE.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserAE.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserAE.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java true Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserPlaintextAggregate.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserPlaintextAggregate.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserPlaintextAggregate.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserPlaintextAggregate.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java false Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserTokenizedAggregate.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserTokenizedAggregate.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserTokenizedAggregate.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserTokenizedAggregate.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java false Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserTokenizedInfPosAggregate.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserTokenizedInfPosAggregate.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserTokenizedInfPosAggregate.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserDependencyParserTokenizedInfPosAggregate.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java false Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSRLPlaintextAggregate.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSRLPlaintextAggregate.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSRLPlaintextAggregate.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSRLPlaintextAggregate.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java false Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSRLTokenizedAggregate.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSRLTokenizedAggregate.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSRLTokenizedAggregate.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSRLTokenizedAggregate.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java false Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSRLTokenizedInfPosAggregate.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSRLTokenizedInfPosAggregate.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSRLTokenizedInfPosAggregate.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSRLTokenizedInfPosAggregate.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java false Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSemanticRoleLabelerAE.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSemanticRoleLabelerAE.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSemanticRoleLabelerAE.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/ClearParserSemanticRoleLabelerAE.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java true Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/LemAssigner.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/LemAssigner.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/LemAssigner.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/LemAssigner.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java true Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/LvgBaseTokenAnnotator.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/LvgBaseTokenAnnotator.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/LvgBaseTokenAnnotator.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/LvgBaseTokenAnnotator.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java true Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/PosAssigner.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/PosAssigner.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/PosAssigner.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/analysis_engine/PosAssigner.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java true Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/cas_consumer/DependencyNodeWriter.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/cas_consumer/DependencyNodeWriter.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/cas_consumer/DependencyNodeWriter.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/cas_consumer/DependencyNodeWriter.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java edu.mayo.bmi.nlp.parser.DependencyNodeWriter Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearParserTestCPE.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearParserTestCPE.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearParserTestCPE.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearParserTestCPE.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerLemTestCPE.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerLemTestCPE.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerLemTestCPE.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerLemTestCPE.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerPosLemTestCPE.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerPosLemTestCPE.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerPosLemTestCPE.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerPosLemTestCPE.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerPosTestCPE.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerPosTestCPE.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerPosTestCPE.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerPosTestCPE.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + Modified: incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_reader/DependencyFileCollectionReader.xml URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_reader/DependencyFileCollectionReader.xml?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_reader/DependencyFileCollectionReader.xml (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/desc/collection_reader/DependencyFileCollectionReader.xml Thu Sep 20 16:07:04 2012 @@ -1,4 +1,24 @@ + org.apache.uima.java edu.mayo.bmi.nlp.parser.DependencyFileCollectionReader Modified: incubator/ctakes/trunk/ctakes-dependency-parser/src/main/java/edu/mayo/bmi/nlp/parser/DependencyNodeWriter.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/src/main/java/edu/mayo/bmi/nlp/parser/DependencyNodeWriter.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/src/main/java/edu/mayo/bmi/nlp/parser/DependencyNodeWriter.java (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/src/main/java/edu/mayo/bmi/nlp/parser/DependencyNodeWriter.java Thu Sep 20 16:07:04 2012 @@ -1,3 +1,21 @@ +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. + */ package edu.mayo.bmi.nlp.parser; /* * Copyright: (c) 2010 Mayo Foundation for Medical Education and Modified: incubator/ctakes/trunk/ctakes-dependency-parser/src/main/java/edu/mayo/bmi/nlp/parser/ae/ClearParserDependencyParserAE.java URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/src/main/java/edu/mayo/bmi/nlp/parser/ae/ClearParserDependencyParserAE.java?rev=1388092&r1=1388091&r2=1388092&view=diff ============================================================================== --- incubator/ctakes/trunk/ctakes-dependency-parser/src/main/java/edu/mayo/bmi/nlp/parser/ae/ClearParserDependencyParserAE.java (original) +++ incubator/ctakes/trunk/ctakes-dependency-parser/src/main/java/edu/mayo/bmi/nlp/parser/ae/ClearParserDependencyParserAE.java Thu Sep 20 16:07:04 2012 @@ -1,26 +1,21 @@ -/* - * Copyright: (c) 2012 Mayo Foundation for Medical Education and - * Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the - * triple-shield Mayo logo are trademarks and service marks of MFMER. - * - * Except as contained in the copyright notice above, or as used to identify - * MFMER as the author of this software, the trade names, trademarks, service - * marks, or product names of the copyright holder shall not be used in - * advertising, promotion or otherwise in connection with this software without - * prior written authorization of the copyright holder. - * - * Licensed under the Apache License, Version 2.0 (the "License"); - * you may not use this file except in compliance with the License. - * You may obtain a copy of the License at - * - * http://www.apache.org/licenses/LICENSE-2.0 - * - * Unless required by applicable law or agreed to in writing, software - * distributed under the License is distributed on an "AS IS" BASIS, - * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - * See the License for the specific language governing permissions and - * limitations under the License. - */ +/** + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. + */ package edu.mayo.bmi.nlp.parser.ae; import java.io.File;