incubator-ctakes-commits mailing list archives

Site index · List index
Message view « Date » · « Thread »
Top « Date » · « Thread »
From chen...@apache.org
Subject svn commit: r1388092 [13/22] - in /incubator/ctakes/trunk: ./ ctakes-chunker/ ctakes-chunker/desc/ ctakes-chunker/scripts/groovy/data/chunk/ ctakes-chunker/scripts/java/data/chunk/ ctakes-chunker/scripts/java/data/chunk/genia/ ctakes-chunker/src/main/j...
Date Thu, 20 Sep 2012 16:07:33 GMT
Modified: incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupAnnotationToJCasAdapter.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupAnnotationToJCasAdapter.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupAnnotationToJCasAdapter.java (original)
+++ incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupAnnotationToJCasAdapter.java Thu Sep 20 16:07:04 2012
@@ -1,26 +1,21 @@
-/*
- * Copyright: (c) 2009   Mayo Foundation for Medical Education and 
- * Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the
- * triple-shield Mayo logo are trademarks and service marks of MFMER.
- *
- * Except as contained in the copyright notice above, or as used to identify 
- * MFMER as the author of this software, the trade names, trademarks, service
- * marks, or product names of the copyright holder shall not be used in
- * advertising, promotion or otherwise in connection with this software without
- * prior written authorization of the copyright holder.
- * 
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- * 
- * http://www.apache.org/licenses/LICENSE-2.0 
- * 
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and 
- * limitations under the License. 
- */
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.uima.lookup.ae;
 
 import java.util.HashMap;

Modified: incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupConsumer.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupConsumer.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupConsumer.java (original)
+++ incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupConsumer.java Thu Sep 20 16:07:04 2012
@@ -1,26 +1,21 @@
-/*
- * Copyright: (c) 2009   Mayo Foundation for Medical Education and 
- * Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the
- * triple-shield Mayo logo are trademarks and service marks of MFMER.
- *
- * Except as contained in the copyright notice above, or as used to identify 
- * MFMER as the author of this software, the trade names, trademarks, service
- * marks, or product names of the copyright holder shall not be used in
- * advertising, promotion or otherwise in connection with this software without
- * prior written authorization of the copyright holder.
- * 
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- * 
- * http://www.apache.org/licenses/LICENSE-2.0 
- * 
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and 
- * limitations under the License. 
- */
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.uima.lookup.ae;
 
 import java.util.Iterator;

Modified: incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupInitializer.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupInitializer.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupInitializer.java (original)
+++ incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupInitializer.java Thu Sep 20 16:07:04 2012
@@ -1,26 +1,21 @@
-/*
- * Copyright: (c) 2009   Mayo Foundation for Medical Education and 
- * Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the
- * triple-shield Mayo logo are trademarks and service marks of MFMER.
- *
- * Except as contained in the copyright notice above, or as used to identify 
- * MFMER as the author of this software, the trade names, trademarks, service
- * marks, or product names of the copyright holder shall not be used in
- * advertising, promotion or otherwise in connection with this software without
- * prior written authorization of the copyright holder.
- * 
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- * 
- * http://www.apache.org/licenses/LICENSE-2.0 
- * 
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and 
- * limitations under the License. 
- */
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.uima.lookup.ae;
 
 import java.util.Iterator;

Modified: incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupParseUtilities.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupParseUtilities.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupParseUtilities.java (original)
+++ incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupParseUtilities.java Thu Sep 20 16:07:04 2012
@@ -1,26 +1,21 @@
-/*
- * Copyright: (c) 2009   Mayo Foundation for Medical Education and 
- * Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the
- * triple-shield Mayo logo are trademarks and service marks of MFMER.
- *
- * Except as contained in the copyright notice above, or as used to identify 
- * MFMER as the author of this software, the trade names, trademarks, service
- * marks, or product names of the copyright holder shall not be used in
- * advertising, promotion or otherwise in connection with this software without
- * prior written authorization of the copyright holder.
- * 
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- * 
- * http://www.apache.org/licenses/LICENSE-2.0 
- * 
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and 
- * limitations under the License. 
- */
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.uima.lookup.ae;
 
 import java.io.File;

Modified: incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupSpec.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupSpec.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupSpec.java (original)
+++ incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/LookupSpec.java Thu Sep 20 16:07:04 2012
@@ -1,26 +1,21 @@
-/*
- * Copyright: (c) 2009   Mayo Foundation for Medical Education and 
- * Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the
- * triple-shield Mayo logo are trademarks and service marks of MFMER.
- *
- * Except as contained in the copyright notice above, or as used to identify 
- * MFMER as the author of this software, the trade names, trademarks, service
- * marks, or product names of the copyright holder shall not be used in
- * advertising, promotion or otherwise in connection with this software without
- * prior written authorization of the copyright holder.
- * 
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- * 
- * http://www.apache.org/licenses/LICENSE-2.0 
- * 
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and 
- * limitations under the License. 
- */
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.uima.lookup.ae;
 
 import edu.mayo.bmi.lookup.algorithms.LookupAlgorithm;

Modified: incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/NamedEntityLookupConsumerImpl.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/NamedEntityLookupConsumerImpl.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/NamedEntityLookupConsumerImpl.java (original)
+++ incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/NamedEntityLookupConsumerImpl.java Thu Sep 20 16:07:04 2012
@@ -1,26 +1,21 @@
-/*
- * Copyright: (c) 2009   Mayo Foundation for Medical Education and 
- * Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the
- * triple-shield Mayo logo are trademarks and service marks of MFMER.
- *
- * Except as contained in the copyright notice above, or as used to identify 
- * MFMER as the author of this software, the trade names, trademarks, service
- * marks, or product names of the copyright holder shall not be used in
- * advertising, promotion or otherwise in connection with this software without
- * prior written authorization of the copyright holder.
- * 
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- * 
- * http://www.apache.org/licenses/LICENSE-2.0 
- * 
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and 
- * limitations under the License. 
- */
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.uima.lookup.ae;
 
 import java.util.Collection;

Modified: incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/OrangeBookFilterConsumerImpl.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/OrangeBookFilterConsumerImpl.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/OrangeBookFilterConsumerImpl.java (original)
+++ incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/OrangeBookFilterConsumerImpl.java Thu Sep 20 16:07:04 2012
@@ -1,26 +1,21 @@
-/*
- * Copyright: (c) 2009   Mayo Foundation for Medical Education and 
- * Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the
- * triple-shield Mayo logo are trademarks and service marks of MFMER.
- *
- * Except as contained in the copyright notice above, or as used to identify 
- * MFMER as the author of this software, the trade names, trademarks, service
- * marks, or product names of the copyright holder shall not be used in
- * advertising, promotion or otherwise in connection with this software without
- * prior written authorization of the copyright holder.
- * 
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- * 
- * http://www.apache.org/licenses/LICENSE-2.0 
- * 
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and 
- * limitations under the License. 
- */
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.uima.lookup.ae;
 
 import java.util.Collection;

Modified: incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsDictionaryLookupAnnotator.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsDictionaryLookupAnnotator.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsDictionaryLookupAnnotator.java (original)
+++ incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsDictionaryLookupAnnotator.java Thu Sep 20 16:07:04 2012
@@ -1,25 +1,20 @@
-/*
- * Copyright: (c) 2009   Mayo Foundation for Medical Education and 
- * Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the
- * triple-shield Mayo logo are trademarks and service marks of MFMER.
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
  *
- * Except as contained in the copyright notice above, or as used to identify 
- * MFMER as the author of this software, the trade names, trademarks, service
- * marks, or product names of the copyright holder shall not be used in
- * advertising, promotion or otherwise in connection with this software without
- * prior written authorization of the copyright holder.
- * 
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- * 
- * http://www.apache.org/licenses/LICENSE-2.0 
- * 
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and 
- * limitations under the License. 
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
  */
 package edu.mayo.bmi.uima.lookup.ae;
 

Modified: incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsToSnomedConsumerImpl.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsToSnomedConsumerImpl.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsToSnomedConsumerImpl.java (original)
+++ incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsToSnomedConsumerImpl.java Thu Sep 20 16:07:04 2012
@@ -1,26 +1,21 @@
-/*
- * Copyright: (c) 2009   Mayo Foundation for Medical Education and 
- * Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the
- * triple-shield Mayo logo are trademarks and service marks of MFMER.
- *
- * Except as contained in the copyright notice above, or as used to identify 
- * MFMER as the author of this software, the trade names, trademarks, service
- * marks, or product names of the copyright holder shall not be used in
- * advertising, promotion or otherwise in connection with this software without
- * prior written authorization of the copyright holder.
- * 
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- * 
- * http://www.apache.org/licenses/LICENSE-2.0 
- * 
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and 
- * limitations under the License. 
- */
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.uima.lookup.ae;
 
 import java.sql.SQLException;

Modified: incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsToSnomedDbConsumerImpl.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsToSnomedDbConsumerImpl.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsToSnomedDbConsumerImpl.java (original)
+++ incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsToSnomedDbConsumerImpl.java Thu Sep 20 16:07:04 2012
@@ -1,26 +1,21 @@
-/*
- * Copyright: (c) 2009   Mayo Foundation for Medical Education and 
- * Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the
- * triple-shield Mayo logo are trademarks and service marks of MFMER.
- *
- * Except as contained in the copyright notice above, or as used to identify 
- * MFMER as the author of this software, the trade names, trademarks, service
- * marks, or product names of the copyright holder shall not be used in
- * advertising, promotion or otherwise in connection with this software without
- * prior written authorization of the copyright holder.
- * 
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- * 
- * http://www.apache.org/licenses/LICENSE-2.0 
- * 
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and 
- * limitations under the License. 
- */
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.uima.lookup.ae;
 
 import java.sql.Connection;

Modified: incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsToSnomedLuceneConsumerImpl.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsToSnomedLuceneConsumerImpl.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsToSnomedLuceneConsumerImpl.java (original)
+++ incubator/ctakes/trunk/ctakes-dictionary-lookup/src/main/java/edu/mayo/bmi/uima/lookup/ae/UmlsToSnomedLuceneConsumerImpl.java Thu Sep 20 16:07:04 2012
@@ -1,26 +1,21 @@
-/*
- * Copyright: (c) 2009   Mayo Foundation for Medical Education and 
- * Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the
- * triple-shield Mayo logo are trademarks and service marks of MFMER.
- *
- * Except as contained in the copyright notice above, or as used to identify 
- * MFMER as the author of this software, the trade names, trademarks, service
- * marks, or product names of the copyright holder shall not be used in
- * advertising, promotion or otherwise in connection with this software without
- * prior written authorization of the copyright holder.
- * 
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- * 
- * http://www.apache.org/licenses/LICENSE-2.0 
- * 
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and 
- * limitations under the License. 
- */
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.uima.lookup.ae;
 
 

Modified: incubator/ctakes/trunk/ctakes-drug-ner/.classpath
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/.classpath?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/.classpath (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/.classpath Thu Sep 20 16:07:04 2012
@@ -1,33 +1,13 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<classpath>
-	<classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/UIMA"/>
-	<classpathentry kind="src" output="target/classes" path="target/generated-sources/jcasgen">
-		<attributes>
-			<attribute name="optional" value="true"/>
-			<attribute name="maven.pomderived" value="true"/>
-		</attributes>
-	</classpathentry>
-	<classpathentry kind="src" output="target/classes" path="src/main/java">
-		<attributes>
-			<attribute name="optional" value="true"/>
-			<attribute name="maven.pomderived" value="true"/>
-		</attributes>
-	</classpathentry>
-	<classpathentry kind="src" output="target/test-classes" path="src/test/java">
-		<attributes>
-			<attribute name="optional" value="true"/>
-			<attribute name="maven.pomderived" value="true"/>
-		</attributes>
-	</classpathentry>
-	<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6">
-		<attributes>
-			<attribute name="maven.pomderived" value="true"/>
-		</attributes>
-	</classpathentry>
-	<classpathentry kind="con" path="org.eclipse.m2e.MAVEN2_CLASSPATH_CONTAINER">
-		<attributes>
-			<attribute name="maven.pomderived" value="true"/>
-		</attributes>
-	</classpathentry>
-	<classpathentry kind="output" path="target/classes"/>
-</classpath>
+<?xml version="1.0" encoding="UTF-8"?>
+<classpath>
+	<classpathentry kind="src" output="target/classes" path="src/main/java"/>
+	<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6"/>
+	<classpathentry kind="con" path="org.eclipse.m2e.MAVEN2_CLASSPATH_CONTAINER"/>
+	<classpathentry kind="con" path="org.eclipse.jdt.USER_LIBRARY/UIMA"/>
+	<classpathentry kind="src" output="target/classes" path="target/generated-sources/jcasgen">
+		<attributes>
+			<attribute name="optional" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry kind="output" path="target/classes"/>
+</classpath>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/NotesIIST_RTF.DTD
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/NotesIIST_RTF.DTD?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/NotesIIST_RTF.DTD (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/NotesIIST_RTF.DTD Thu Sep 20 16:07:04 2012
@@ -1,3 +1,23 @@
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <!-- edited with XML Spy v4.3 U (http://www.xmlspy.com) by Mayo Foundation (Mayo Foundation) -->
 <!--
 *==================================================================================*

Modified: incubator/ctakes/trunk/ctakes-drug-ner/data/cda/testpatient_cn_1.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/data/cda/testpatient_cn_1.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/data/cda/testpatient_cn_1.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/data/cda/testpatient_cn_1.xml Thu Sep 20 16:07:04 2012
@@ -1,2 +1,22 @@
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <?xml version="1.0" encoding="UTF-8"?><!DOCTYPE levelone SYSTEM "NotesIIST_RTF.DTD" [<!ENTITY deg '&#x00B0;'><!ENTITY sup2 '&#x00B2;'><!ENTITY micro '&#x00B5;'>]><levelone><clinical_document_header><id EX="###DOC_ID###" RT="2.16.840.1.113883.3.2.1.1"/><set_id EX="###SET_ID###" RT="2.16.840.1.113883.3.2.1.2"/><version_nbr V="###V_NBR###"/><document_type_cd V="687" S="2.16.840.1.113883.3.2.1.3" DN="Nutrition Consult"/><origination_dttm V="20030822T131513"/><confidentiality_cd V="0" S="2.16.840.1.113883.3.2.1.4"/><patient_encounter><practice_setting_cd V="4284" S="2.16.840.1.113883.3.2.1.7" DN="Nutr Clinic"/><encounter_tmr V="20030822"/><service_location><id EX="TBD" RT="2.16.840.1.113883.3.2.1.8"/></service_location><facility><organization><organization.nm V="MCR"/></organization></facility></patient_encounter><legal_authenticator><legal_authenticator.type_cd V="SPV"/><participation_tmr V=""/><signature_cd V="S"/><person><id EX="99999999" RT="2.16.840.1.113883.3.2.1.9"/><perso
 n_name><nm><GIV V="Julie"/><MID V="A"/><FAM V="Tester"/><PFX V=""/><SFX V="RD"/></nm><person_name.type_cd V="S"/></person_name></person></legal_authenticator><originator><originator.type_cd V="AUT"/><participation_tmr V="20030822T131513"/><person><id EX="99999999" RT="2.16.840.1.113883.3.2.1.9"/><person_name><nm><GIV V="Julie"/><MID V="A."/><FAM V="Tester"/><PFX V=""/><SFX V="RD"/></nm><person_name.type_cd V="L"/></person_name><telecom V="5-5555" USE="PG"/></person></originator><originating_organization><originating_organization.type_cd V="CST"/><organization><id EX="TBD" RT="2.16.840.1.113883.3.2.1.10"/><organization.nm V="Originating Organization - Coding TBD"/></organization></originating_organization><transcriptionist><transcriptionist.type_cd V="ENT"/><participation_tmr V="20030822T131513"/><person><id EX="99999999" RT="2.16.840.1.113883.3.2.1.9"/><person_name><nm><GIV V="Julie"/><MID V="A."/><FAM V="Tester"/></nm><person_name.type_cd V="L"/></person_name></person></tra
 nscriptionist><provider><provider.type_cd V="CON"/><participation_tmr V="20030822T131513"/><person><id EX="99999999" RT="2.16.840.1.113883.3.2.1.9"/><person_name><nm><GIV V="Julie"/><MID V="A."/><FAM V="Tester"/><PFX V=""/><SFX V="RD"/></nm><person_name.type_cd V="L"/></person_name><telecom V="5-5555" USE="PG"/></person></provider><patient><patient.type_cd V="PATSBJ"/><person><id EX="3-303-925" RT="2.16.840.1.113883.3.2.1.1"/><person_name><nm><GIV V="Terri"/><MID V="A."/><FAM V="Testing"/><PFX V="Judge"/><SFX V="Jr.,D.D.S."/></nm><person_name.type_cd V="L"/></person_name><addr><LIT V="100 Quality Control Avenue"/><CTY V="Rochester"/><STA V="MN"/><ZIP V="55905"/><CNT V="US"/></addr></person><is_known_by><id EX="TBD" RT="2.16.840.1.113883.3.2.2.1"/><is_known_to><id EX="TBD" RT="2.16.840.1.113883.3.2.1.10"/></is_known_to></is_known_by><birth_dttm V="19341123"/><administrative_gender_cd V="F" S="2.16.840.1.113883.3.2.2.2"/></patient><status_cd V="TBD" S="2.16.840.1.113883.3.2.1.
 16"/><cn1_admin_data><cn1_status_cd V="Fnl" S="2.16.840.1.113883.3.2.3.1"/><cn1_service_cd V="MNT" S="2.16.840.1.113883.3.2.3.2"/><cn1_event_cd V="CON" S="2.16.840.1.113883.3.2.3.3"/><cn1_document_id EX="000000000" RT="2.16.840.1.113883.3.2.3.4"/><cn1_revision_nbr V="1"/><cn1_site_cd V="RCH" S="2.16.840.1.113883.3.2.3.10"/></cn1_admin_data><document_title V="Document Service Name - Coding TBD" S="2.16.840.1.113883.3.2.1.17"/></clinical_document_header><body><section><caption><caption_cd V="20100" DN="Revision History" S="2.16.840.1.113883.3.1.21" SV="1.0"/>Revision History</caption></section><section><caption><caption_cd V="20112" DN="I/R/P" S="2.16.840.1.113883.3.1.21" SV="1.0"/>Impression / Report / Plan</caption><table><caption><caption_cd V="20003" DN="I/R/P" S="2.16.840.1.113883.3.1.21" SV="1.0"/></caption><tr><th>Problem</th><th>Plan</th></tr></table></section><section><caption><caption_cd V="20113" DN="Diagnoses" S="2.16.840.1.113883.3.1.21" SV="1.0"/>Diagnosis</capti
 on><table><caption><caption_cd V="20003" DN="Diagnoses" S="2.16.840.1.113883.3.1.21" SV="1.0"/></caption><tr><th>Problem</th><th>Diagnosis</th></tr></table></section><section><caption><caption_cd V="20101" DN="Ref" S="2.16.840.1.113883.3.1.21" SV="1.0"/>Referral Source</caption><paragraph><content>Dr. Nutritious</content></paragraph></section><section><caption><caption_cd V="20104" DN="CC" S="2.16.840.1.113883.3.1.21" SV="1.0"/>Chief Complaint/Reason for Visit</caption><paragraph><content>Medical Nutrition Therapy for Hyperlipidemia. Aspirin 200-mg once-a-day. Ibuprofen increased from 200 mg to 300 mg p.o. twice a day. Aspirin 80 mg.
 acetaminophen discontinued.</content></paragraph></section><section><caption><caption_cd V="20103" DN="HPI" S="2.16.840.1.113883.3.1.21" SV="1.0"/>History of Present Illness</caption><table><caption><caption_cd V="20003" DN="HPI" S="2.16.840.1.113883.3.1.21" SV="1.0"/></caption><tr><th>Problem</th><th>History</th></tr><tr><td/><td><paragraph><content>Referral from: Julie Tester, RD, LD, CNSD</content></paragraph></td></tr><tr><td/><td><paragraph><content>Phone contact: (555) 555-1212</content></paragraph></td></tr><tr><td/><td><paragraph><content>Height: 144 cm   Current Weight: 45 kg   Date of current weight: 02-29-2001   Admit Weight:  53 kg   BMI: 18 kg/m2</content></paragraph></td></tr><tr><td/><td><paragraph><content>Diet: General</content></paragraph></td></tr><tr><td/><td><paragraph><content>Daily Calorie needs (kcals): 1500 calories, assessed as HB + 20% for activity.</content></paragraph></td></tr><tr><td/><td><paragraph><content>Daily Protein needs: 40 grams,  asse
 ssed as 1.0 g/kg.</content></paragraph></td></tr><tr><td/><td><paragraph><content>Pt has been on a 3 day calorie count and has had an average intake of 1100 calories.  She was instructed to drink 2-3 cans of liquid supplement to help promote weight gain.  She agrees with the plan and has my number for further assessment. May want a Resting Metabolic Rate as well. She takes an aspirin a day for knee pain.</content></paragraph></td></tr></table><table><caption><caption_cd V="20004" DN="MC985" S="2.16.840.1.113883.3.1.21" SV="1.0"/></caption><tr><th><caption_cd V="30001" DN="PFH Date" S="2.16.840.1.113883.3.1.22" SV="1.0"/>PFH Date</th><th><caption_cd V="30002" DN="CVI Page#" S="2.16.840.1.113883.3.1.22" SV="1.0"/>CVI Page#</th><th><caption_cd V="30003" DN="CVI Date" S="2.16.840.1.113883.3.1.22" SV="1.0"/>CVI Date</th></tr><tr><td></td><td></td><td></td></tr></table></section><section><caption><caption_cd V="20107" DN="Med/Surg Hx" S="2.16.840.1.113883.3.1.21" SV="1.0"/>Past Me
 dical/Surgical History</caption></section><section><caption><caption_cd V="20105" DN="Allerg" S="2.16.840.1.113883.3.1.21" SV="1.0"/>Allergies</caption></section><section><caption><caption_cd V="20108" DN="Soc Hist" S="2.16.840.1.113883.3.1.21" SV="1.0"/>Social History</caption></section><section><caption><caption_cd V="20109" DN="Fam Hist" S="2.16.840.1.113883.3.1.21" SV="1.0"/>Family History</caption></section><section><caption><caption_cd V="20104" DN="Meds" S="2.16.840.1.113883.3.1.21" SV="1.0"/>Current Medications</caption></section><section><caption><caption_cd V="20106" DN="Sys Rev" S="2.16.840.1.113883.3.1.21" SV="1.0"/>System Review</caption></section><section><caption><caption_cd V="20115" DN="Spec Instr" S=".16.840.1.113883.3.1.21" SV="1.0"/>Special Instructions</caption></section><section><caption><caption_cd V="20114" DN="Administrative" S="2.16.840.1.113883.3.1.21" SV="1.0"/>Administrative</caption><table><caption><caption_cd V="20005" DN="Billing" S="2.16.840.
 1.113883.3.1.21" SV="1.0"/></caption><tr><th>Billing</th><th>Value</th></tr><tr><th><caption_cd V="30004" DN="Margin Code" S="2.16.840.1.113883.3.1.22" SV="1.0"/>Margin Code</th><td></td></tr><tr><th><caption_cd V="30005" DN="Total Time" S="2.16.840.1.113883.3.1.22" SV="1.0"/>Total Time</th><td></td></tr><tr><th><caption_cd V="30006" DN="Counseling Time" S="2.16.840.1.113883.3.1.22" SV="1.0"/>Counseling Time</th><td></td></tr></table></section></body></levelone>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotator.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotator.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotator.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotator.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <taeDescription xmlns="http://uima.apache.org/resourceSpecifier">
   <frameworkImplementation>org.apache.uima.java</frameworkImplementation>
   <primitive>true</primitive>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotatorUMLS.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotatorUMLS.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotatorUMLS.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotatorUMLS.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <taeDescription xmlns="http://uima.apache.org/resourceSpecifier">
   <frameworkImplementation>org.apache.uima.java</frameworkImplementation>
   <primitive>true</primitive>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregateCDAProcessor.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregateCDAProcessor.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregateCDAProcessor.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregateCDAProcessor.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <taeDescription xmlns="http://uima.apache.org/resourceSpecifier">
   <frameworkImplementation>org.apache.uima.java</frameworkImplementation>
   <primitive>false</primitive>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregateCDAUMLSProcessor.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregateCDAUMLSProcessor.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregateCDAUMLSProcessor.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregateCDAUMLSProcessor.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <taeDescription xmlns="http://uima.apache.org/resourceSpecifier">
   <frameworkImplementation>org.apache.uima.java</frameworkImplementation>
   <primitive>false</primitive>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregatePlaintextProcessor.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregatePlaintextProcessor.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregatePlaintextProcessor.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregatePlaintextProcessor.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <analysisEngineDescription xmlns="http://uima.apache.org/resourceSpecifier">
   <frameworkImplementation>org.apache.uima.java</frameworkImplementation>
   <primitive>false</primitive>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregatePlaintextUMLSProcessor.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregatePlaintextUMLSProcessor.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregatePlaintextUMLSProcessor.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugAggregatePlaintextUMLSProcessor.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <analysisEngineDescription xmlns="http://uima.apache.org/resourceSpecifier">
   <frameworkImplementation>org.apache.uima.java</frameworkImplementation>
   <primitive>false</primitive>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugCNP2LookupWindow.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugCNP2LookupWindow.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugCNP2LookupWindow.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugCNP2LookupWindow.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <taeDescription xmlns="http://uima.apache.org/resourceSpecifier">
   <frameworkImplementation>org.apache.uima.java</frameworkImplementation>
   <primitive>true</primitive>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugLookupWindowAnnotator.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugLookupWindowAnnotator.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugLookupWindowAnnotator.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugLookupWindowAnnotator.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <taeDescription xmlns="http://uima.apache.org/resourceSpecifier">
   <frameworkImplementation>org.apache.uima.java</frameworkImplementation>
   <primitive>false</primitive>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugMentionAnnotator.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugMentionAnnotator.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugMentionAnnotator.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DrugMentionAnnotator.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <taeDescription xmlns="http://uima.apache.org/resourceSpecifier">
   <frameworkImplementation>org.apache.uima.java</frameworkImplementation>
   <primitive>true</primitive>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/NegationDxAnnotator.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/NegationDxAnnotator.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/NegationDxAnnotator.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/NegationDxAnnotator.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <taeDescription xmlns="http://uima.apache.org/resourceSpecifier">
 <frameworkImplementation>org.apache.uima.java</frameworkImplementation>
 <primitive>true</primitive>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/cas_consumer/DrugNERCasConsumer.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/cas_consumer/DrugNERCasConsumer.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/cas_consumer/DrugNERCasConsumer.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/cas_consumer/DrugNERCasConsumer.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <casConsumerDescription xmlns="http://uima.apache.org/resourceSpecifier">
   <frameworkImplementation>org.apache.uima.java</frameworkImplementation>
   <implementationName>edu.mayo.bmi.uima.ner.cc.ConsumeNamedEntityRecordModel</implementationName>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/collection_processing_engine/DrugNER_CPE.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/collection_processing_engine/DrugNER_CPE.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/collection_processing_engine/DrugNER_CPE.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/collection_processing_engine/DrugNER_CPE.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <cpeDescription xmlns="http://uima.apache.org/resourceSpecifier">
 <collectionReader>
 <collectionIterator>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/collection_processing_engine/DrugNER_PlainText_CPE.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/collection_processing_engine/DrugNER_PlainText_CPE.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/collection_processing_engine/DrugNER_PlainText_CPE.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/collection_processing_engine/DrugNER_PlainText_CPE.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <cpeDescription xmlns="http://uima.apache.org/resourceSpecifier">
     <collectionReader>
         <collectionIterator>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/desc/type_system/NERTypeSystem.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/desc/type_system/NERTypeSystem.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/desc/type_system/NERTypeSystem.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/desc/type_system/NERTypeSystem.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <typeSystemDescription xmlns="http://uima.apache.org/resourceSpecifier">
   <name>Drug mentions to NERtype system</name>
   <description/>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/metadata/install.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/metadata/install.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/metadata/install.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/metadata/install.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <COMPONENT_INSTALLATION_DESCRIPTOR>
 	<OS>
 		<NAME>Windows and Linux</NAME>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/resources/lookup/LookupDesc_DrugNER.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/resources/lookup/LookupDesc_DrugNER.xml?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/resources/lookup/LookupDesc_DrugNER.xml (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/resources/lookup/LookupDesc_DrugNER.xml Thu Sep 20 16:07:04 2012
@@ -1,4 +1,24 @@
 <?xml version="1.0" encoding="UTF-8"?>
+<!--
+
+    Licensed to the Apache Software Foundation (ASF) under one
+    or more contributor license agreements.  See the NOTICE file
+    distributed with this work for additional information
+    regarding copyright ownership.  The ASF licenses this file
+    to you under the Apache License, Version 2.0 (the
+    "License"); you may not use this file except in compliance
+    with the License.  You may obtain a copy of the License at
+
+      http://www.apache.org/licenses/LICENSE-2.0
+
+    Unless required by applicable law or agreed to in writing,
+    software distributed under the License is distributed on an
+    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+    KIND, either express or implied.  See the License for the
+    specific language governing permissions and limitations
+    under the License.
+
+-->
 <lookupSpecification>
 	<!--  Defines what dictionaries will be used in terms of implementation specifics and metaField configuration. -->
 	<dictionaries>

Modified: incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/ContainsSetTextValueCondition.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/ContainsSetTextValueCondition.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/ContainsSetTextValueCondition.java (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/ContainsSetTextValueCondition.java Thu Sep 20 16:07:04 2012
@@ -1,3 +1,21 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.fsm.ner.elements.conditions;
 
 import java.util.Set;

Modified: incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/DecimalStrengthStatusCondition.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/DecimalStrengthStatusCondition.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/DecimalStrengthStatusCondition.java (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/DecimalStrengthStatusCondition.java Thu Sep 20 16:07:04 2012
@@ -1,3 +1,21 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.fsm.ner.elements.conditions;
 
 import net.openai.util.fsm.Condition;

Modified: incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/DosageCondition.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/DosageCondition.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/DosageCondition.java (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/DosageCondition.java Thu Sep 20 16:07:04 2012
@@ -1,3 +1,21 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.fsm.ner.elements.conditions;
 
 import net.openai.util.fsm.Condition;

Modified: incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/DrugChangeStatusCondition.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/DrugChangeStatusCondition.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/DrugChangeStatusCondition.java (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/DrugChangeStatusCondition.java Thu Sep 20 16:07:04 2012
@@ -1,3 +1,21 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.fsm.ner.elements.conditions;
 
 import net.openai.util.fsm.Condition;

Modified: incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FormCondition.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FormCondition.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FormCondition.java (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FormCondition.java Thu Sep 20 16:07:04 2012
@@ -1,3 +1,21 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.fsm.ner.elements.conditions;
 
 import net.openai.util.fsm.Condition;

Modified: incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FractionCondition.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FractionCondition.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FractionCondition.java (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FractionCondition.java Thu Sep 20 16:07:04 2012
@@ -1,3 +1,21 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.fsm.ner.elements.conditions;
 
 import net.openai.util.fsm.Condition;

Modified: incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FractionStrengthCondition.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FractionStrengthCondition.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FractionStrengthCondition.java (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FractionStrengthCondition.java Thu Sep 20 16:07:04 2012
@@ -1,3 +1,21 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.fsm.ner.elements.conditions;
 
 import net.openai.util.fsm.Condition;

Modified: incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FrequencyUnitCondition.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FrequencyUnitCondition.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FrequencyUnitCondition.java (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/FrequencyUnitCondition.java Thu Sep 20 16:07:04 2012
@@ -1,3 +1,21 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.fsm.ner.elements.conditions;
 
 import net.openai.util.fsm.Condition;

Modified: incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/RangeDosageCondition.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/RangeDosageCondition.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/RangeDosageCondition.java (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/RangeDosageCondition.java Thu Sep 20 16:07:04 2012
@@ -1,3 +1,21 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.fsm.ner.elements.conditions;
 
 import net.openai.util.fsm.Condition;

Modified: incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/RangeStrengthCondition.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/RangeStrengthCondition.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/RangeStrengthCondition.java (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/RangeStrengthCondition.java Thu Sep 20 16:07:04 2012
@@ -1,3 +1,21 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.fsm.ner.elements.conditions;
 
 import net.openai.util.fsm.Condition;

Modified: incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/RouteCondition.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/RouteCondition.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/RouteCondition.java (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/RouteCondition.java Thu Sep 20 16:07:04 2012
@@ -1,3 +1,21 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.fsm.ner.elements.conditions;
 
 import net.openai.util.fsm.Condition;

Modified: incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/StrengthCondition.java
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/StrengthCondition.java?rev=1388092&r1=1388091&r2=1388092&view=diff
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/StrengthCondition.java (original)
+++ incubator/ctakes/trunk/ctakes-drug-ner/src/main/java/edu/mayo/bmi/fsm/ner/elements/conditions/StrengthCondition.java Thu Sep 20 16:07:04 2012
@@ -1,3 +1,21 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *   http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing,
+ * software distributed under the License is distributed on an
+ * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+ * KIND, either express or implied.  See the License for the
+ * specific language governing permissions and limitations
+ * under the License.
+ */
 package edu.mayo.bmi.fsm.ner.elements.conditions;
 
 import net.openai.util.fsm.Condition;



Mime
View raw message