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From chen...@apache.org
Subject svn commit: r1387365 - in /incubator/ctakes/trunk: ./ ctakes-chunker/ ctakes-clinical-pipeline/ ctakes-constituency-parser/ ctakes-context-tokenizer/ ctakes-core/ ctakes-dependency-parser/ ctakes-dictionary-lookup/ ctakes-drug-ner/ ctakes-ne-contexts/ ...
Date Tue, 18 Sep 2012 21:28:01 GMT
Author: chenpei
Date: Tue Sep 18 21:28:00 2012
New Revision: 1387365

URL: http://svn.apache.org/viewvc?rev=1387365&view=rev
Log:
https://issues.apache.org/jira/browse/CTAKES-30
Adding the maven pom.xml for build (this is based off the maven sandbox).  Still a work in progress... will add new namespaces before this will start working.

Added:
    incubator/ctakes/trunk/ctakes-chunker/pom.xml
    incubator/ctakes/trunk/ctakes-clinical-pipeline/pom.xml
    incubator/ctakes/trunk/ctakes-constituency-parser/pom.xml
    incubator/ctakes/trunk/ctakes-context-tokenizer/pom.xml
    incubator/ctakes/trunk/ctakes-core/pom.xml
    incubator/ctakes/trunk/ctakes-dependency-parser/pom.xml
    incubator/ctakes/trunk/ctakes-dictionary-lookup/pom.xml
    incubator/ctakes/trunk/ctakes-drug-ner/pom.xml
    incubator/ctakes/trunk/ctakes-ne-contexts/pom.xml
    incubator/ctakes/trunk/ctakes-pos-tagger/pom.xml
    incubator/ctakes/trunk/ctakes-preprocessor/pom.xml
    incubator/ctakes/trunk/ctakes-side-effect/pom.xml
    incubator/ctakes/trunk/ctakes-type-system/pom.xml
    incubator/ctakes/trunk/license_header.txt
    incubator/ctakes/trunk/pom.xml
Removed:
    incubator/ctakes/trunk/build.properties
    incubator/ctakes/trunk/build.xml

Added: incubator/ctakes/trunk/ctakes-chunker/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-chunker/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-chunker/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-chunker/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,45 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-chunker</artifactId>
+	<name>Apache cTAKES chunker</name>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>3.0.0-SNAPSHOT</version>
+	</parent>
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-type-system</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-utils</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-pos-tagger</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>log4j</groupId>
+			<artifactId>log4j</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.opennlp</groupId>
+			<artifactId>opennlp-maxent</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.opennlp</groupId>
+			<artifactId>opennlp-tools</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>junit</groupId>
+			<artifactId>junit</artifactId>
+		</dependency>
+	</dependencies>
+</project>

Added: incubator/ctakes/trunk/ctakes-clinical-pipeline/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-clinical-pipeline/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-clinical-pipeline/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-clinical-pipeline/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,64 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-clinical-pipeline</artifactId>
+	<name>Apache cTAKES Clinical Documents Pipeline</name>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>3.0.0-SNAPSHOT</version>
+	</parent>
+	
+
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-type-system</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-utils</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>jdom</groupId>
+			<artifactId>jdom</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>junit</groupId>
+			<artifactId>junit</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-context-tokenizer</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-dictionary-lookup</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-preprocessor</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-lvg</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-chunker</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-ne-contexts</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-pos-tagger</artifactId>
+		</dependency>
+	</dependencies>
+	
+</project>

Added: incubator/ctakes/trunk/ctakes-constituency-parser/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-constituency-parser/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-constituency-parser/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-constituency-parser/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,41 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-constituency-parser</artifactId>
+	<name>Apache cTAKES Constituency Parser</name>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>3.0.0-SNAPSHOT</version>
+	</parent>
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-type-system</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-utils</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.opennlp</groupId>
+			<artifactId>opennlp-tools</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>log4j</groupId>
+			<artifactId>log4j</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>jdom</groupId>
+			<artifactId>jdom</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>junit</groupId>
+			<artifactId>junit</artifactId>
+		</dependency>
+	</dependencies>
+</project>

Added: incubator/ctakes/trunk/ctakes-context-tokenizer/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-context-tokenizer/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-context-tokenizer/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-context-tokenizer/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,34 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-context-tokenizer</artifactId>
+	<name>Apache cTAKES context dependent tokenizer</name>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>3.0.0-SNAPSHOT</version>
+	</parent>
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-type-system</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-utils</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>log4j</groupId>
+			<artifactId>log4j</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>junit</groupId>
+			<artifactId>junit</artifactId>
+			<scope>test</scope>
+		</dependency>
+	</dependencies>
+</project>

Added: incubator/ctakes/trunk/ctakes-core/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-core/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-core/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-core/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,71 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-core</artifactId>
+	<name>Apache cTAKES core</name>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>2.6.0-SNAPSHOT</version>
+	</parent>
+
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-type-system</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-utils</artifactId>
+		</dependency>
+		
+		<dependency>
+			<groupId>jdom</groupId>
+			<artifactId>jdom</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>log4j</groupId>
+			<artifactId>log4j</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.opennlp</groupId>
+			<artifactId>opennlp-maxent</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.opennlp</groupId>
+			<artifactId>opennlp-tools</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.lucene</groupId>
+			<artifactId>lucene-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>junit</groupId>
+			<artifactId>junit</artifactId>
+		</dependency>
+
+		<!-- Dependencies that still need to be uploaded to Maven Central; when 
+			done, the dependency versions should be moved into the parent pom -->
+		<dependency>
+			<groupId>net.sourceforge.openai</groupId>
+			<artifactId>fsm</artifactId>
+			<version>0.1a</version>
+			<scope>system</scope>
+			<systemPath>${project.basedir}/lib/OpenAI_FSM.jar</systemPath>
+		</dependency>
+		<dependency>
+			<groupId>findstruct</groupId>
+			<artifactId>findstruct</artifactId>
+			<version>0.0.1</version>
+			<scope>system</scope>
+			<systemPath>${project.basedir}/lib/FindStructAPI.jar</systemPath>
+		</dependency>
+		<dependency>
+			<groupId>sqlWrapper</groupId>
+			<artifactId>sqlWrapper</artifactId>
+			<version>0.0.1</version>
+			<scope>system</scope>
+			<systemPath>${project.basedir}/lib/SQLWrapper.jar</systemPath>
+		</dependency>
+	</dependencies>
+</project>

Added: incubator/ctakes/trunk/ctakes-dependency-parser/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dependency-parser/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-dependency-parser/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-dependency-parser/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,90 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-dependency-parser</artifactId>
+	<name>Apache cTAKES Dependency Parser</name>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>3.0.0-SNAPSHOT</version>
+	</parent>
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-type-system</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-lvg</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-pos-tagger</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-utils</artifactId>
+		</dependency>
+		
+		<dependency>
+			<groupId>com.googlecode.clearparser</groupId>
+			<artifactId>clearparser</artifactId>
+			<version>0.4.0-SNAPSHOT</version>
+			<exclusions>
+				<exclusion>
+					<groupId>org.apache.commons</groupId>
+					<artifactId>commons-compress</artifactId>
+				</exclusion>
+				<exclusion>
+					<groupId>org.apache.opennlp</groupId>
+					<artifactId>opennlp-maxent</artifactId>
+				</exclusion>
+				<exclusion>
+					<groupId>org.apache.opennlp</groupId>
+					<artifactId>opennlp-tools</artifactId>
+				</exclusion>
+			</exclusions>
+		</dependency>
+		
+		<dependency>
+			<groupId>args4j</groupId>
+			<artifactId>args4j</artifactId>
+		</dependency>
+		
+       
+        
+		<dependency>
+			<groupId>junit</groupId>
+			<artifactId>junit</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.cleartk</groupId>
+			<artifactId>cleartk-util</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.uimafit</groupId>
+			<artifactId>uimafit</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>com.carrotsearch</groupId>
+			<artifactId>hppc</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>commons-io</groupId>
+			<artifactId>commons-io</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>commons-lang</groupId>
+			<artifactId>commons-lang</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>commons-logging</groupId>
+			<artifactId>commons-logging</artifactId>
+		</dependency>
+	</dependencies>
+	<description>This wraps the ClearParser dependency parser and semantic role labeler into a UIMA friendly annotator</description>
+</project>

Added: incubator/ctakes/trunk/ctakes-dictionary-lookup/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-dictionary-lookup/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-dictionary-lookup/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-dictionary-lookup/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,37 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-dictionary-lookup</artifactId>
+	<name>Apache cTAKES dictionary lookup</name>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>3.0.0-SNAPSHOT</version>
+	</parent>
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-type-system</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>log4j</groupId>
+			<artifactId>log4j</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.lucene</groupId>
+			<artifactId>lucene-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>jdom</groupId>
+			<artifactId>jdom</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>junit</groupId>
+			<artifactId>junit</artifactId>
+		</dependency>
+	</dependencies>
+</project>

Added: incubator/ctakes/trunk/ctakes-drug-ner/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-drug-ner/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-drug-ner/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-drug-ner/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,88 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-drug-ner</artifactId>
+	<name>Apache cTAKES Drug NER</name>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>3.0.0-SNAPSHOT</version>
+	</parent>
+	
+	
+	<properties>
+		<jcasgen.typesystem>desc/type_system/NERTypeSystem.xml</jcasgen.typesystem>
+	</properties>
+	
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-type-system</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-utils</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-dictionary-lookup</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-context-tokenizer</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-ne-contexts</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>log4j</groupId>
+			<artifactId>log4j</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.opennlp</groupId>
+			<artifactId>opennlp-tools</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>jdom</groupId>
+			<artifactId>jdom</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>junit</groupId>
+			<artifactId>junit</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>tw.edu.ntu.csie</groupId>
+			<artifactId>libsvm</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.lucene</groupId>
+			<artifactId>lucene-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>net.sourceforge.openai</groupId>
+			<artifactId>fsm</artifactId>
+			<version>0.1a</version>
+			<scope>system</scope>
+			<systemPath>${project.basedir}/../ctakes-core/lib/OpenAI_FSM.jar</systemPath>
+		</dependency>
+	</dependencies>
+	
+	<build>
+		<plugins>
+			<!-- Invoke JCasGen on the type system (see properties above) -->
+			<plugin>
+				<groupId>org.codehaus.mojo</groupId>
+				<artifactId>exec-maven-plugin</artifactId>
+			</plugin>
+			<plugin>
+				<groupId>org.codehaus.mojo</groupId>
+				<artifactId>build-helper-maven-plugin</artifactId>
+			</plugin>
+		</plugins>
+	</build>
+</project>

Added: incubator/ctakes/trunk/ctakes-ne-contexts/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-ne-contexts/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-ne-contexts/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-ne-contexts/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,33 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-ne-contexts</artifactId>
+	<name>Apache cTAKES named entity contexts</name>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>3.0.0-SNAPSHOT</version>
+	</parent>
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-type-system</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-utils</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>log4j</groupId>
+			<artifactId>log4j</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>junit</groupId>
+			<artifactId>junit</artifactId>
+		</dependency>
+	</dependencies>
+</project>

Added: incubator/ctakes/trunk/ctakes-pos-tagger/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-pos-tagger/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-pos-tagger/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-pos-tagger/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,45 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-pos-tagger</artifactId>
+	<name>Apache cTAKES part-of-speech tagger</name>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>3.0.0-SNAPSHOT</version>
+	</parent>
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-type-system</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-utils</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>log4j</groupId>
+			<artifactId>log4j</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.opennlp</groupId>
+			<artifactId>opennlp-maxent</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.opennlp</groupId>
+			<artifactId>opennlp-tools</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>jdom</groupId>
+			<artifactId>jdom</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>junit</groupId>
+			<artifactId>junit</artifactId>
+		</dependency>
+	</dependencies>
+</project>

Added: incubator/ctakes/trunk/ctakes-preprocessor/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-preprocessor/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-preprocessor/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-preprocessor/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,41 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-preprocessor</artifactId>
+	<name>Apache cTAKES document preprocessor</name>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>3.0.0-SNAPSHOT</version>
+	</parent>
+	<build>
+		<testSourceDirectory>test</testSourceDirectory>
+		<resources>
+			<resource>
+				<directory>resources</directory>
+			</resource>
+		</resources>
+	</build>
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-type-system</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>xerces</groupId>
+			<artifactId>xercesImpl</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>log4j</groupId>
+			<artifactId>log4j</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>junit</groupId>
+			<artifactId>junit</artifactId>
+		</dependency>
+	</dependencies>
+</project>

Added: incubator/ctakes/trunk/ctakes-side-effect/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-side-effect/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-side-effect/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-side-effect/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,65 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-side-effect</artifactId>
+	<name>Apache cTAKES Side Effects</name>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>3.0.0-SNAPSHOT</version>
+	</parent>
+	
+	<properties>
+	<jcasgen.typesystem>desc/type_system/SideEffectTypeSystem.xml</jcasgen.typesystem>
+	</properties>
+
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-type-system</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-dictionary-lookup</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-drug-ner</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.ctakes</groupId>
+			<artifactId>ctakes-utils</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>log4j</groupId>
+			<artifactId>log4j</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>jdom</groupId>
+			<artifactId>jdom</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>junit</groupId>
+			<artifactId>junit</artifactId>
+		</dependency>
+	</dependencies>
+	
+	<build>
+		<plugins>
+			<!-- Invoke JCasGen on the type system (see properties above) -->
+			<plugin>
+				<groupId>org.codehaus.mojo</groupId>
+				<artifactId>exec-maven-plugin</artifactId>
+			</plugin>
+			<plugin>
+				<groupId>org.codehaus.mojo</groupId>
+				<artifactId>build-helper-maven-plugin</artifactId>
+			</plugin>
+		</plugins>
+	</build>
+	
+</project>

Added: incubator/ctakes/trunk/ctakes-type-system/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/ctakes-type-system/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/ctakes-type-system/pom.xml (added)
+++ incubator/ctakes/trunk/ctakes-type-system/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,48 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<artifactId>ctakes-type-system</artifactId>
+	<name>Apache cTAKES common type system</name>
+	<description>Defines the cTAKES type system UIMA annotation classes.</description>
+	<parent>
+		<groupId>org.apache.ctakes</groupId>
+		<artifactId>ctakes</artifactId>
+		<version>3.0.0-SNAPSHOT</version>
+	</parent>
+	<properties>
+		<jcasgen.typesystem>org/apache/ctakes/common_type_system.xml</jcasgen.typesystem>
+	</properties>
+	<dependencies>
+		<dependency>
+			<groupId>org.apache.uima</groupId>
+			<artifactId>uimaj-core</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>org.uimafit</groupId>
+			<artifactId>uimafit</artifactId>
+		</dependency>
+		<dependency>
+			<groupId>tw.edu.ntu.csie</groupId>
+			<artifactId>libsvm</artifactId>
+		</dependency>
+		<dependency>
+        	<groupId>junit</groupId>
+        	<artifactId>junit</artifactId>
+        <scope>test</scope>
+      </dependency>
+	</dependencies>
+
+	<build>
+		<plugins>
+			<!-- Invoke JCasGen on the type system (see properties above) -->
+			<plugin>
+				<groupId>org.codehaus.mojo</groupId>
+				<artifactId>exec-maven-plugin</artifactId>
+			</plugin>
+			<plugin>
+				<groupId>org.codehaus.mojo</groupId>
+				<artifactId>build-helper-maven-plugin</artifactId>
+			</plugin>
+		</plugins>
+	</build>
+</project>

Added: incubator/ctakes/trunk/license_header.txt
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/license_header.txt?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/license_header.txt (added)
+++ incubator/ctakes/trunk/license_header.txt Tue Sep 18 21:28:00 2012
@@ -0,0 +1,17 @@
+Licensed to the Apache Software Foundation (ASF) under one
+or more contributor license agreements.  See the NOTICE file
+distributed with this work for additional information
+regarding copyright ownership.  The ASF licenses this file
+to you under the Apache License, Version 2.0 (the
+"License"); you may not use this file except in compliance
+with the License.  You may obtain a copy of the License at
+
+  http://www.apache.org/licenses/LICENSE-2.0
+
+Unless required by applicable law or agreed to in writing,
+software distributed under the License is distributed on an
+"AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+KIND, either express or implied.  See the License for the
+specific language governing permissions and limitations
+under the License.
+

Added: incubator/ctakes/trunk/pom.xml
URL: http://svn.apache.org/viewvc/incubator/ctakes/trunk/pom.xml?rev=1387365&view=auto
==============================================================================
--- incubator/ctakes/trunk/pom.xml (added)
+++ incubator/ctakes/trunk/pom.xml Tue Sep 18 21:28:00 2012
@@ -0,0 +1,452 @@
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<groupId>org.apache.ctakes</groupId>
+	<artifactId>ctakes</artifactId>
+	<version>2.6.0-SNAPSHOT</version>
+	<packaging>pom</packaging>
+	<name>cTAKES</name>
+	<scm>
+		<!-- In child modules, Maven will append ${artifactId} to the following 
+			URLs -->
+		<connection>scm:svn:https://svn.apache.org/repos/asf/incubator/ctakes/</connection>
+		<developerConnection>scm:svn:https://svn.apache.org/repos/asf/incubator/ctakes/</developerConnection>
+		<url>https://svn.apache.org/repos/asf/incubator/ctakes/</url>
+	</scm>
+	<repositories>
+		<repository>
+			<id>cleartk-googlecode</id>
+			<url>http://cleartk.googlecode.com/svn/repo/</url>
+		</repository>
+	</repositories>
+	<properties>
+		<ctakes.version>3.0.0-SNAPSHOT</ctakes.version>
+		<maven.compiler.source>1.6</maven.compiler.source>
+		<maven.compiler.target>1.6</maven.compiler.target>
+		<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
+	</properties>
+	<modules>
+		<module>ctakes-utils</module>
+		<module>ctakes-core</module>
+		<module>ctakes-type-system</module>
+		<module>ctakes-pos-tagger</module>
+		<module>ctakes-chunker</module>
+		<module>ctakes-preprocessor</module>
+		<module>ctakes-dictionary-lookup</module>
+		<module>ctakes-context-tokenizer</module>
+		<module>ctakes-lvg</module>
+		<module>ctakes-ne-contexts</module>
+		<module>ctakes-constituency-parser</module>
+		<module>ctakes-drug-ner</module>
+		<module>ctakes-side-effect</module>
+		<module>ctakes-dependency-parser</module>
+		<module>ctakes-relation-extractor</module>
+	</modules>
+	<dependencyManagement>
+		<dependencies>
+			<!-- cTAKES module versions -->
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>ctakes-type-system</artifactId>
+				<version>${ctakes.version}</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>ctakes-core</artifactId>
+				<version>${ctakes.version}</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>ctakes-dictionary-lookup</artifactId>
+				<version>${ctakes.version}</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>ctakes-preprocessor</artifactId>
+				<version>${ctakes.version}</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>ctakes-pos-tagger</artifactId>
+				<version>${ctakes.version}</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>ctakes-chunker</artifactId>
+				<version>${ctakes.version}</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>ctakes-utils</artifactId>
+				<version>${ctakes.version}</version>
+				<scope>test</scope>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>
+					ctakes-context-tokenizer
+				</artifactId>
+				<version>${ctakes.version}</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>
+					ctakes-ne-contexts
+				</artifactId>
+				<version>${ctakes.version}</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>
+					ctakes-constituency-parser
+				</artifactId>
+				<version>${ctakes.version}</version>
+			</dependency>			
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>
+					ctakes-drug-ner
+				</artifactId>
+				<version>${ctakes.version}</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>
+					ctakes-side-effect
+				</artifactId>
+				<version>${ctakes.version}</version>
+			</dependency>
+			<!-- cTAKES third party dependency versions -->
+			<dependency>
+				<groupId>jdom</groupId>
+				<artifactId>jdom</artifactId>
+				<version>1.0</version>
+			</dependency>
+			<!-- <dependency> <groupId>jama</groupId> <artifactId>jama</artifactId> 
+				<version>1.0.2</version> </dependency> -->
+			<dependency>
+				<groupId>junit</groupId>
+				<artifactId>junit</artifactId>
+				<version>[4.10]</version>
+				<scope>test</scope>
+			</dependency>
+			<dependency>
+				<groupId>log4j</groupId>
+				<artifactId>log4j</artifactId>
+				<version>1.2.16</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.lucene</groupId>
+				<artifactId>lucene-core</artifactId>
+				<version>3.5.0</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.opennlp</groupId>
+				<artifactId>opennlp-maxent</artifactId>
+				<version>3.0.2-incubating</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.opennlp</groupId>
+				<artifactId>opennlp-tools</artifactId>
+				<version>1.5.2-incubating</version>
+			</dependency>
+			<dependency>
+				<groupId>org.apache.uima</groupId>
+				<artifactId>uimaj-core</artifactId>
+				<version>2.4.0</version>
+			</dependency>
+			<dependency>
+				<groupId>org.uimafit</groupId>
+				<artifactId>uimafit</artifactId>
+				<version>1.3.0</version>
+				<exclusions>
+					<exclusion>
+						<groupId>commons-io</groupId>
+						<artifactId>commons-io</artifactId>
+					</exclusion>
+				</exclusions>
+			</dependency>
+			<dependency>
+				<groupId>tw.edu.ntu.csie</groupId>
+				<artifactId>libsvm</artifactId>
+				<version>3.1</version>
+			</dependency>
+			<dependency>
+				<groupId>xerces</groupId>
+				<artifactId>xercesImpl</artifactId>
+				<version>2.10.0</version>
+			</dependency>
+			<dependency>
+				<groupId>org.cleartk</groupId>
+				<artifactId>cleartk-chunker</artifactId>
+				<version>1.0.1</version>
+			</dependency>
+			<dependency>
+				<groupId>org.cleartk</groupId>
+				<artifactId>cleartk-eval</artifactId>
+				<version>0.8.1</version>
+			</dependency>
+			<dependency>
+				<groupId>org.cleartk</groupId>
+				<artifactId>cleartk-ml</artifactId>
+				<version>1.0.1</version>
+			</dependency>
+			<dependency>
+				<groupId>org.cleartk</groupId>
+				<artifactId>cleartk-ml-libsvm</artifactId>
+				<version>1.0.1</version>
+			</dependency>
+			<dependency>
+				<groupId>org.cleartk</groupId>
+				<artifactId>cleartk-ml-opennlp-maxent</artifactId>
+				<version>1.0.2</version>
+			</dependency>
+			<dependency>
+				<groupId>org.cleartk</groupId>
+				<artifactId>cleartk-test-util</artifactId>
+				<version>1.0.1</version>
+			</dependency>
+			<dependency>
+				<groupId>org.cleartk</groupId>
+				<artifactId>cleartk-util</artifactId>
+				<version>0.8.1</version>
+			</dependency>
+			<dependency>
+				<groupId>args4j</groupId>
+				<artifactId>args4j</artifactId>
+				<version>2.0.16</version>
+			</dependency>
+			<dependency>
+				<groupId>commons-io</groupId>
+				<artifactId>commons-io</artifactId>
+				<version>2.0.1</version>
+			</dependency>
+			<dependency>
+				<groupId>commons-lang</groupId>
+				<artifactId>commons-lang</artifactId>
+				<version>2.4</version>
+			</dependency>
+			<dependency>
+				<groupId>commons-logging</groupId>
+				<artifactId>commons-logging</artifactId>
+				<version>1.1.1</version>
+			</dependency>
+			<dependency>
+				<groupId>com.google.guava</groupId>
+				<artifactId>guava</artifactId>
+				<version>10.0</version>
+			</dependency>
+			<dependency>
+				<groupId>com.carrotsearch</groupId>
+				<artifactId>hppc</artifactId>
+				<version>0.4.1</version>
+			</dependency>
+			<dependency>
+				<groupId>org.springframework</groupId>
+				<artifactId>spring-core</artifactId>
+				<version>3.0.3.RELEASE</version>
+			</dependency>
+
+
+			<dependency>
+				<groupId>org.apache.ctakes</groupId>
+				<artifactId>ctakes-lvg</artifactId>
+				<version>${ctakes.version}</version>
+			</dependency>
+		</dependencies>
+	</dependencyManagement>
+	<build>
+		<!-- It's good practice to explicitly declare versions for all plugins -->
+		<pluginManagement>
+			<plugins>
+
+				<plugin>
+					<groupId>com.mycila.maven-license-plugin</groupId>
+					<artifactId>maven-license-plugin</artifactId>
+					<configuration>
+						<header>license_header.txt</header>
+						<mapping>
+							<java>JAVADOC_STYLE</java>
+							<groovy>JAVADOC_STYLE</groovy>
+							<js>JAVADOC_STYLE</js>
+							<css>JAVADOC_STYLE</css>
+							<xml>XML_STYLE</xml>
+							<dtd>XML_STYLE</dtd>
+							<xsd>XML_STYLE</xsd>
+							<html>XML_STYLE</html>
+							<htm>XML_STYLE</htm>
+							<xsl>XML_STYLE</xsl>
+							<fml>XML_STYLE</fml>
+							<apt>DOUBLETILDE_STYLE</apt>
+							<properties>SCRIPT_STYLE</properties>
+							<sh>SCRIPT_STYLE</sh>
+							<!-- We're disabling .txt files for now because some 
+							Annotators may not be able to handle standard comments
+							in text files. This may break name values pairs such as stopWords.txt
+							-->
+							<!-- <txt>TEXT</txt> -->
+							<bat>BATCH</bat>
+							<cmd>BATCH</cmd>
+							<sql>DOUBLEDASHES_STYLE</sql>
+							<jsp>DYNASCRIPT_STYLE</jsp>
+							<ftl>FTL</ftl>
+							<xhtml>XML_STYLE</xhtml>
+							<vm>SHARPSTAR_STYLE</vm>
+							<jspx>XML_STYLE</jspx>
+						</mapping>
+						<properties>
+							<owner>Apache Software Foundation</owner>
+							<year>${project.inceptionYear}</year>
+							<email>ctakes-dev@incubator.apache.org</email>
+						</properties>
+						<strictCheck>true</strictCheck>
+					</configuration>
+				</plugin>
+				<plugin>
+					<artifactId>maven-assembly-plugin</artifactId>
+					<version>2.3</version>
+				</plugin>
+				<plugin>
+					<artifactId>maven-clean-plugin</artifactId>
+					<version>2.4.1</version>
+				</plugin>
+				<plugin>
+					<artifactId>maven-compiler-plugin</artifactId>
+					<version>2.4</version>
+				</plugin>
+				<plugin>
+					<artifactId>maven-deploy-plugin</artifactId>
+					<version>2.7</version>
+				</plugin>
+				<plugin>
+					<artifactId>maven-eclipse-plugin</artifactId>
+					<version>2.9</version>
+				</plugin>
+				<plugin>
+					<artifactId>maven-gpg-plugin</artifactId>
+					<version>1.4</version>
+				</plugin>
+				<plugin>
+					<artifactId>maven-install-plugin</artifactId>
+					<version>2.3.1</version>
+				</plugin>
+				<plugin>
+					<artifactId>maven-jar-plugin</artifactId>
+					<version>2.4</version>
+				</plugin>
+				<plugin>
+					<artifactId>maven-javadoc-plugin</artifactId>
+					<version>2.8.1</version>
+				</plugin>
+				<plugin>
+					<artifactId>maven-release-plugin</artifactId>
+					<version>2.3</version>
+				</plugin>
+				<plugin>
+					<artifactId>maven-resources-plugin</artifactId>
+					<version>2.5</version>
+				</plugin>
+				<plugin>
+					<artifactId>maven-site-plugin</artifactId>
+					<version>3.1</version>
+				</plugin>
+				<plugin>
+					<artifactId>maven-source-plugin</artifactId>
+					<version>2.1.2</version>
+				</plugin>
+				<!-- Maven expects tests to start or end with "Test", not "Tests", so 
+					explicitly include files ending in "Tests" -->
+				<plugin>
+					<artifactId>maven-surefire-plugin</artifactId>
+					<version>2.12</version>
+					<configuration>
+						<includes>
+							<include>**/*Tests.java</include>
+						</includes>
+					</configuration>
+				</plugin>
+
+				<!-- All plugins below should really only be in common-type-system. However, 
+					some cTAKES modules still declare their own type systems internally. So until 
+					those are fixed, this needs to stay in the parent pom. -->
+
+				<!-- This plugin generates java files with JCasGen -->
+				<plugin>
+					<groupId>org.codehaus.mojo</groupId>
+					<artifactId>exec-maven-plugin</artifactId>
+					<version>1.2.1</version>
+					<executions>
+						<execution>
+							<id>run-jcasgen-${project.artifactId}</id>
+							<phase>process-resources</phase>
+							<goals>
+								<goal>java</goal>
+							</goals>
+						</execution>
+					</executions>
+					<configuration>
+						<mainClass>org.uimafit.util.JCasGenPomFriendly</mainClass>
+						<arguments>
+							<argument>file:${project.basedir}/src/main/resources/${jcasgen.typesystem}
+							</argument>
+							<argument>${project.build.directory}/generated-sources/jcasgen</argument>
+						</arguments>
+					</configuration>
+				</plugin>
+				<!-- This plugin adds the jcasgen generated source code folder as a project 
+					source folder -->
+				<plugin>
+					<groupId>org.codehaus.mojo</groupId>
+					<artifactId>build-helper-maven-plugin</artifactId>
+					<version>1.7</version>
+					<executions>
+						<execution>
+							<id>add-jcasgen-sources-${project.artifactId}</id>
+							<phase>process-resources</phase>
+							<goals>
+								<goal>add-source</goal>
+							</goals>
+							<configuration>
+								<sources>
+									<source>${project.build.directory}/generated-sources/jcasgen</source>
+								</sources>
+							</configuration>
+						</execution>
+					</executions>
+				</plugin>
+				<!--This plugin's configuration is used to store Eclipse m2e settings 
+					only. It has no influence on the Maven build itself. -->
+				<plugin>
+					<groupId>org.eclipse.m2e</groupId>
+					<artifactId>lifecycle-mapping</artifactId>
+					<version>1.0.0</version>
+					<configuration>
+						<lifecycleMappingMetadata>
+							<pluginExecutions>
+								<pluginExecution>
+									<pluginExecutionFilter>
+										<groupId>
+											org.codehaus.mojo
+										</groupId>
+										<artifactId>
+											exec-maven-plugin
+										</artifactId>
+										<versionRange>
+											[1.2.1,)
+										</versionRange>
+										<goals>
+											<goal>java</goal>
+										</goals>
+									</pluginExecutionFilter>
+									<action>
+										<execute />
+									</action>
+								</pluginExecution>
+							</pluginExecutions>
+						</lifecycleMappingMetadata>
+					</configuration>
+				</plugin>
+			</plugins>
+		</pluginManagement>
+	</build>
+</project>



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