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From Ted Yu <yuzhih...@gmail.com>
Subject Re: Corrupt HFile
Date Wed, 15 Jan 2014 04:59:25 GMT
Which hadoop release are you using ?

How many HFiles were corrupted ?

Does lzo work properly or lzo never worked ?

Thanks


On Tue, Jan 14, 2014 at 7:36 PM, 宾莉金 <binlijin@gmail.com> wrote:

> We use hbase-0.94.10 and encounter corrupt hfile.
>
>
> 2014-01-11 23:24:16,547 DEBUG org.apache.hadoop.hbase.util.FSUtils:
> Creating
>
> file=hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/.tmp/8a4869aafeae43ee8294bf7b65b92e63
> with permission=rwxrwxrwx
> 2014-01-11 23:24:16,550 INFO
> org.apache.hadoop.hbase.regionserver.StoreFile: Bloom filter type for
>
> hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/.tmp/8a4869aafeae43ee8294bf7b65b92e63:
> ROW, CompoundBloomFilterWriter
> 2014-01-11 23:24:16,550 INFO
> org.apache.hadoop.hbase.regionserver.StoreFile: Delete Family Bloom filter
> type for
>
> hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/.tmp/8a4869aafeae43ee8294bf7b65b92e63:
> CompoundBloomFilterWriter
>
> 2014-01-11 23:25:29,769 INFO org.apache.hadoop.hbase.regionserver.Store:
> Renaming compacted file at
>
> hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/.tmp/8a4869aafeae43ee8294bf7b65b92e63
> to
>
> hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/cf/8a4869aafeae43ee8294bf7b65b92e63
>
> 2014-01-11 23:25:29,914 INFO org.apache.hadoop.hbase.regionserver.Store:
> Completed major compaction of 4 file(s) in cf of
> cbu2,/0614,1386589566547.735414b148ed70e79f4c0406963bb0c9. into
> 8a4869aafeae43ee8294bf7b65b92e63, size=883.6 M; total size for store is
> 884.5 M
>
>
> 2014-01-15 00:15:54,412 WARN org.apache.hadoop.hbase.io.hfile.HFile: File
>
> hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/cf/8a4869aafeae43ee8294bf7b65b92e63
> Stored checksum value of -1392402101 at offset 64905 does not match
> computed checksum 242524898, total data size 64950 Checksum data range
> offset 16384 len 16384 Header dump: magic: 4918304907327195946 blockType
> DATA compressedBlockSizeNoHeader 64884 uncompressedBlockSizeNoHeader 262185
> prevBlockOffset 71067534 checksumType CRC32 bytesPerChecksum 16384
> onDiskDataSizeWithHeader 64901
> 2014-01-15 00:15:54,412 WARN org.apache.hadoop.hbase.io.hfile.HFile: HBase
> checksum verification failed for file
>
> hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/cf/8a4869aafeae43ee8294bf7b65b92e63
> at offset 71128929 filesize 926536062. Retrying read with HDFS checksums
> turned on...
>
> 2014-01-15 00:15:54,413 ERROR
> org.apache.hadoop.hbase.regionserver.HRegionServer:
> java.lang.ArrayIndexOutOfBoundsException
>         at
>
> com.hadoop.compression.lzo.LzoDecompressor.setInput(LzoDecompressor.java:208)
>         at
>
> org.apache.hadoop.io.compress.BlockDecompressorStream.decompress(BlockDecompressorStream.java:97)
>         at
>
> org.apache.hadoop.io.compress.DecompressorStream.read(DecompressorStream.java:83)
>         at java.io.BufferedInputStream.fill(BufferedInputStream.java:218)
>         at java.io.BufferedInputStream.read1(BufferedInputStream.java:258)
>         at java.io.BufferedInputStream.read(BufferedInputStream.java:317)
>         at org.apache.hadoop.io.IOUtils.readFully(IOUtils.java:192)
>         at
>
> org.apache.hadoop.hbase.io.hfile.HFileBlock$AbstractFSReader.decompress(HFileBlock.java:1461)
>         at
>
> org.apache.hadoop.hbase.io.hfile.HFileBlock$FSReaderV2.readBlockDataInternal(HFileBlock.java:1891)
>         at
>
> org.apache.hadoop.hbase.io.hfile.HFileBlock$FSReaderV2.readBlockData(HFileBlock.java:1734)
>         at
>
> org.apache.hadoop.hbase.io.hfile.HFileReaderV2.readBlock(HFileReaderV2.java:342)
>         at
>
> org.apache.hadoop.hbase.io.hfile.HFileReaderV2$AbstractScannerV2.readNextDataBlock(HFileReaderV2.java:597)
>         at
>
> org.apache.hadoop.hbase.io.hfile.HFileReaderV2$ScannerV2.next(HFileReaderV2.java:695)
>         at
>
> org.apache.hadoop.hbase.regionserver.StoreFileScanner.reseekAtOrAfter(StoreFileScanner.java:248)
>         at
>
> org.apache.hadoop.hbase.regionserver.StoreFileScanner.reseek(StoreFileScanner.java:161)
>         at
>
> org.apache.hadoop.hbase.regionserver.NonLazyKeyValueScanner.doRealSeek(NonLazyKeyValueScanner.java:54)
>         at
>
> org.apache.hadoop.hbase.regionserver.KeyValueHeap.generalizedSeek(KeyValueHeap.java:321)
>         at
>
> org.apache.hadoop.hbase.regionserver.KeyValueHeap.reseek(KeyValueHeap.java:265)
>         at
>
> org.apache.hadoop.hbase.regionserver.StoreScanner.reseek(StoreScanner.java:545)
>         at
>
> org.apache.hadoop.hbase.regionserver.StoreScanner.next(StoreScanner.java:411)
>         at
>
> org.apache.hadoop.hbase.regionserver.KeyValueHeap.next(KeyValueHeap.java:143)
>         at
>
> org.apache.hadoop.hbase.regionserver.HRegion$RegionScannerImpl.populateResult(HRegion.java:3973)
>         at
>
> org.apache.hadoop.hbase.regionserver.HRegion$RegionScannerImpl.nextInternal(HRegion.java:4045)
>         at
>
> org.apache.hadoop.hbase.regionserver.HRegion$RegionScannerImpl.nextRaw(HRegion.java:3916)
>         at
>
> org.apache.hadoop.hbase.regionserver.HRegion$RegionScannerImpl.next(HRegion.java:3897)
>         at
>
> org.apache.hadoop.hbase.regionserver.HRegion$RegionScannerImpl.next(HRegion.java:3940)
>         at
> org.apache.hadoop.hbase.regionserver.HRegion.get(HRegion.java:4867)
>         at
> org.apache.hadoop.hbase.regionserver.HRegion.get(HRegion.java:4840)
>         at
>
> org.apache.hadoop.hbase.regionserver.HRegionServer.get(HRegionServer.java:2253)
>         at
>
> org.apache.hadoop.hbase.regionserver.HRegionServer.multi(HRegionServer.java:3828)
>         at sun.reflect.GeneratedMethodAccessor38.invoke(Unknown Source)
>         at
>
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>         at java.lang.reflect.Method.invoke(Method.java:597)
>         at
>
> org.apache.hadoop.hbase.ipc.WritableRpcEngine$Server.call(WritableRpcEngine.java:320)
>         at
> org.apache.hadoop.hbase.ipc.HBaseServer$Handler.run(HBaseServer.java:1426)
>
> --
> *Best Regards,*
>  lijin bin
>

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