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From "Hadoop QA (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT
Date Wed, 16 Mar 2016 18:30:35 GMT

    [ https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15197886#comment-15197886
] 

Hadoop QA commented on HBASE-9393:
----------------------------------

| (x) *{color:red}-1 overall{color}* |
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|| Vote || Subsystem || Runtime || Comment ||
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 0s {color} |
{color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s {color} | {color:green}
The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s {color} | {color:red}
The patch doesn't appear to include any new or modified tests. Please justify why no new tests
are needed for this patch. Also please list what manual steps were performed to verify this
patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 3m 5s {color}
| {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 37s {color} |
{color:green} master passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 32s {color} |
{color:green} master passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 12s {color}
| {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 17s {color}
| {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 52s {color} |
{color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 25s {color} |
{color:green} master passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s {color} |
{color:green} master passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 43s {color}
| {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 39s {color} |
{color:green} the patch passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 39s {color} | {color:green}
the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 32s {color} |
{color:green} the patch passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 32s {color} | {color:green}
the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 45s {color}
| {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 18s {color}
| {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 0s {color}
| {color:green} Patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 29m 32s {color}
| {color:green} Patch does not cause any errors with Hadoop 2.4.0 2.4.1 2.5.0 2.5.1 2.5.2
2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 42s {color} |
{color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 29s {color} |
{color:green} the patch passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 38s {color} |
{color:green} the patch passed with JDK v1.7.0_79 {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 109m 1s {color} | {color:red}
hbase-server in the patch failed with JDK v1.8.0. {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 82m 34s {color} | {color:red}
hbase-server in the patch failed with JDK v1.7.0_79. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 27s {color}
| {color:green} Patch does not generate ASF License warnings. {color} |
| {color:black}{color} | {color:black} {color} | {color:black} 244m 30s {color} | {color:black}
{color} |
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|| Reason || Tests ||
| JDK v1.8.0 Timed out junit tests | org.apache.hadoop.hbase.master.procedure.TestServerCrashProcedure
|
|   | org.apache.hadoop.hbase.master.TestGetLastFlushedSequenceId |
|   | org.apache.hadoop.hbase.master.balancer.TestStochasticLoadBalancer2 |
|   | org.apache.hadoop.hbase.master.TestMasterFailover |
|   | org.apache.hadoop.hbase.util.TestHBaseFsckOneRS |
|   | org.apache.hadoop.hbase.mapred.TestTableInputFormat |
|   | org.apache.hadoop.hbase.wal.TestWALFiltering |
|   | org.apache.hadoop.hbase.mapred.TestTableMapReduceUtil |
|   | org.apache.hadoop.hbase.master.TestGetInfoPort |
|   | org.apache.hadoop.hbase.wal.TestWALSplitCompressed |
|   | org.apache.hadoop.hbase.master.TestMasterFailoverBalancerPersistence |
|   | org.apache.hadoop.hbase.util.hbck.TestOfflineMetaRebuildHole |
|   | org.apache.hadoop.hbase.util.TestHBaseFsckEncryption |
|   | org.apache.hadoop.hbase.util.TestHBaseFsckReplicas |
|   | org.apache.hadoop.hbase.master.TestTableStateManager |
|   | org.apache.hadoop.hbase.master.TestTableLockManager |
|   | org.apache.hadoop.hbase.master.procedure.TestMasterFailoverWithProcedures |
|   | org.apache.hadoop.hbase.master.TestMasterRestartAfterDisablingTable |
|   | org.apache.hadoop.hbase.master.procedure.TestWALProcedureStoreOnHDFS |
|   | org.apache.hadoop.hbase.master.TestSplitLogManager |
|   | org.apache.hadoop.hbase.util.hbck.TestOfflineMetaRebuildOverlap |
|   | org.apache.hadoop.hbase.master.balancer.TestStochasticLoadBalancer |
|   | org.apache.hadoop.hbase.master.TestRollingRestart |
|   | org.apache.hadoop.hbase.util.TestMiniClusterLoadEncoded |
|   | org.apache.hadoop.hbase.master.TestDistributedLogSplitting |
|   | org.apache.hadoop.hbase.util.TestMiniClusterLoadSequential |
|   | org.apache.hadoop.hbase.util.TestFanOutOneBlockAsyncDFSOutput |
|   | org.apache.hadoop.hbase.master.TestMasterShutdown |
|   | org.apache.hadoop.hbase.util.TestRegionSplitter |
|   | org.apache.hadoop.hbase.util.TestMergeTable |
|   | org.apache.hadoop.hbase.util.TestMergeTool |
|   | org.apache.hadoop.hbase.util.hbck.TestOfflineMetaRebuildBase |
|   | org.apache.hadoop.hbase.util.TestRegionMover |
|   | org.apache.hadoop.hbase.master.snapshot.TestSnapshotFileCache |
|   | org.apache.hadoop.hbase.master.TestMasterNoCluster |
|   | org.apache.hadoop.hbase.master.TestRestartCluster |
|   | org.apache.hadoop.hbase.util.TestMiniClusterLoadParallel |
|   | org.apache.hadoop.hbase.TestIOFencing |
|   | org.apache.hadoop.hbase.TestLocalHBaseCluster |
|   | org.apache.hadoop.hbase.util.TestHBaseFsckMOB |
|   | org.apache.hadoop.hbase.snapshot.TestMobFlushSnapshotFromClient |
|   | org.apache.hadoop.hbase.TestMetaTableAccessor |
|   | org.apache.hadoop.hbase.util.TestConnectionCache |
|   | org.apache.hadoop.hbase.master.handler.TestCreateTableHandler |
|   | org.apache.hadoop.hbase.master.handler.TestEnableTableHandler |
|   | org.apache.hadoop.hbase.mapred.TestTableSnapshotInputFormat |
|   | org.apache.hadoop.hbase.master.procedure.TestAddColumnFamilyProcedure |
|   | org.apache.hadoop.hbase.util.TestFSUtils |
|   | org.apache.hadoop.hbase.util.TestHBaseFsckTwoRS |
| JDK v1.7.0_79 Timed out junit tests | org.apache.hadoop.hbase.master.procedure.TestDisableTableProcedure
|
|   | org.apache.hadoop.hbase.master.procedure.TestDeleteTableProcedure |
|   | org.apache.hadoop.hbase.master.procedure.TestServerCrashProcedure |
|   | org.apache.hadoop.hbase.master.procedure.TestModifyTableProcedure |
|   | org.apache.hadoop.hbase.master.procedure.TestCreateTableProcedure |
|   | org.apache.hadoop.hbase.master.procedure.TestEnableTableProcedure |
|   | org.apache.hadoop.hbase.mapreduce.TestWALPlayer |
|   | org.apache.hadoop.hbase.mapreduce.TestTableInputFormat |
|   | org.apache.hadoop.hbase.mapreduce.TestHRegionPartitioner |
|   | org.apache.hadoop.hbase.master.TestGetLastFlushedSequenceId |
|   | org.apache.hadoop.hbase.master.balancer.TestStochasticLoadBalancer2 |
|   | org.apache.hadoop.hbase.master.TestMasterFailover |
|   | org.apache.hadoop.hbase.trace.TestHTraceHooks |
|   | org.apache.hadoop.hbase.snapshot.TestSnapshotClientRetries |
|   | org.apache.hadoop.hbase.util.TestHBaseFsckOneRS |
|   | org.apache.hadoop.hbase.mapred.TestTableInputFormat |
|   | org.apache.hadoop.hbase.namespace.TestNamespaceAuditor |
|   | org.apache.hadoop.hbase.TestHBaseTestingUtility |
|   | org.apache.hadoop.hbase.wal.TestWALFiltering |
|   | org.apache.hadoop.hbase.mapred.TestTableMapReduceUtil |
|   | org.apache.hadoop.hbase.wal.TestDefaultWALProviderWithHLogKey |
|   | org.apache.hadoop.hbase.mapreduce.TestCellCounter |
|   | org.apache.hadoop.hbase.master.TestGetInfoPort |
|   | org.apache.hadoop.hbase.wal.TestWALSplitCompressed |
|   | org.apache.hadoop.hbase.master.TestMasterFailoverBalancerPersistence |
|   | org.apache.hadoop.hbase.master.cleaner.TestSnapshotFromMaster |
|   | org.apache.hadoop.hbase.util.hbck.TestOfflineMetaRebuildHole |
|   | org.apache.hadoop.hbase.util.TestHBaseFsckEncryption |
|   | org.apache.hadoop.hbase.util.TestHBaseFsckReplicas |
|   | org.apache.hadoop.hbase.master.normalizer.TestSimpleRegionNormalizerOnCluster |
|   | org.apache.hadoop.hbase.master.TestTableStateManager |
|   | org.apache.hadoop.hbase.master.TestMasterMetrics |
|   | org.apache.hadoop.hbase.mapreduce.TestImportTSVWithOperationAttributes |
|   | org.apache.hadoop.hbase.master.TestTableLockManager |
|   | org.apache.hadoop.hbase.master.procedure.TestMasterFailoverWithProcedures |
|   | org.apache.hadoop.hbase.master.TestMasterRestartAfterDisablingTable |
|   | org.apache.hadoop.hbase.master.procedure.TestWALProcedureStoreOnHDFS |
|   | org.apache.hadoop.hbase.master.TestSplitLogManager |
|   | org.apache.hadoop.hbase.util.hbck.TestOfflineMetaRebuildOverlap |
|   | org.apache.hadoop.hbase.master.balancer.TestStochasticLoadBalancer |
|   | org.apache.hadoop.hbase.master.TestRollingRestart |
|   | org.apache.hadoop.hbase.util.TestCoprocessorScanPolicy |
|   | org.apache.hadoop.hbase.util.TestMiniClusterLoadEncoded |
|   | org.apache.hadoop.hbase.master.TestDistributedLogSplitting |
|   | org.apache.hadoop.hbase.io.encoding.TestDataBlockEncoders |
|   | org.apache.hadoop.hbase.util.TestMiniClusterLoadSequential |
|   | org.apache.hadoop.hbase.util.TestFanOutOneBlockAsyncDFSOutput |
|   | org.apache.hadoop.hbase.master.TestMasterShutdown |
|   | org.apache.hadoop.hbase.master.TestAssignmentManagerOnCluster |
|   | org.apache.hadoop.hbase.master.TestMaster |
|   | org.apache.hadoop.hbase.security.access.TestAccessControlFilter |
|   | org.apache.hadoop.hbase.TestAcidGuarantees |
|   | org.apache.hadoop.hbase.TestGlobalMemStoreSize |
|   | org.apache.hadoop.hbase.TestNamespace |
|   | org.apache.hadoop.hbase.io.encoding.TestChangingEncoding |
|   | org.apache.hadoop.hbase.TestRegionRebalancing |
|   | org.apache.hadoop.hbase.util.TestRegionSplitter |
|   | org.apache.hadoop.hbase.security.visibility.TestVisibilityLabelReplicationWithExpAsString
|
|   | org.apache.hadoop.hbase.security.visibility.TestVisibilityLabelsReplication |
|   | org.apache.hadoop.hbase.util.TestMergeTable |
|   | org.apache.hadoop.hbase.util.TestMergeTool |
|   | org.apache.hadoop.hbase.util.hbck.TestOfflineMetaRebuildBase |
|   | org.apache.hadoop.hbase.util.TestRegionMover |
|   | org.apache.hadoop.hbase.master.snapshot.TestSnapshotFileCache |
|   | org.apache.hadoop.hbase.master.TestMasterNoCluster |
|   | org.apache.hadoop.hbase.security.access.TestCellACLs |
|   | org.apache.hadoop.hbase.master.TestRestartCluster |
|   | org.apache.hadoop.hbase.master.procedure.TestProcedureAdmin |
|   | org.apache.hadoop.hbase.util.TestMiniClusterLoadParallel |
|   | org.apache.hadoop.hbase.TestIOFencing |
|   | org.apache.hadoop.hbase.snapshot.TestRestoreFlushSnapshotFromClient |
|   | org.apache.hadoop.hbase.mapreduce.TestImportExport |
|   | org.apache.hadoop.hbase.master.procedure.TestMasterProcedureEvents |
|   | org.apache.hadoop.hbase.TestLocalHBaseCluster |
|   | org.apache.hadoop.hbase.security.access.TestWithDisabledAuthorization |
|   | org.apache.hadoop.hbase.io.encoding.TestLoadAndSwitchEncodeOnDisk |
|   | org.apache.hadoop.hbase.io.hfile.TestCacheOnWrite |
|   | org.apache.hadoop.hbase.master.handler.TestTableDeleteFamilyHandler |
|   | org.apache.hadoop.hbase.util.TestHBaseFsckMOB |
|   | org.apache.hadoop.hbase.TestHColumnDescriptorDefaultVersions |
|   | org.apache.hadoop.hbase.fs.TestBlockReorder |
|   | org.apache.hadoop.hbase.wal.TestDefaultWALProvider |
|   | org.apache.hadoop.hbase.TestMetaTableAccessor |
|   | org.apache.hadoop.hbase.util.TestConnectionCache |
|   | org.apache.hadoop.hbase.master.handler.TestCreateTableHandler |
|   | org.apache.hadoop.hbase.master.handler.TestEnableTableHandler |
|   | org.apache.hadoop.hbase.security.access.TestZKPermissionsWatcher |
|   | org.apache.hadoop.hbase.mapreduce.TestImportTSVWithTTLs |
|   | org.apache.hadoop.hbase.io.hfile.TestHFileBlock |
|   | org.apache.hadoop.hbase.wal.TestBoundedRegionGroupingStrategy |
|   | org.apache.hadoop.hbase.wal.TestWALFactory |
|   | org.apache.hadoop.hbase.mapreduce.TestSecureLoadIncrementalHFilesSplitRecovery |
|   | org.apache.hadoop.hbase.master.procedure.TestDeleteColumnFamilyProcedure |
|   | org.apache.hadoop.hbase.master.procedure.TestModifyColumnFamilyProcedure |
|   | org.apache.hadoop.hbase.mapreduce.TestTableSnapshotInputFormat |
|   | org.apache.hadoop.hbase.replication.TestMasterReplication |
|   | org.apache.hadoop.hbase.mapred.TestTableSnapshotInputFormat |
|   | org.apache.hadoop.hbase.master.procedure.TestCreateNamespaceProcedure |
|   | org.apache.hadoop.hbase.master.procedure.TestDeleteNamespaceProcedure |
|   | org.apache.hadoop.hbase.master.procedure.TestModifyNamespaceProcedure |
|   | org.apache.hadoop.hbase.master.procedure.TestAddColumnFamilyProcedure |
|   | org.apache.hadoop.hbase.master.TestMasterOperationsForRegionReplicas |
|   | org.apache.hadoop.hbase.io.TestFileLink |
|   | org.apache.hadoop.hbase.util.TestFSUtils |
|   | org.apache.hadoop.hbase.master.TestMetaShutdownHandler |
|   | org.apache.hadoop.hbase.mapreduce.TestLoadIncrementalHFilesSplitRecovery |
|   | org.apache.hadoop.hbase.master.procedure.TestTruncateTableProcedure |
|   | org.apache.hadoop.hbase.wal.TestWALSplit |
|   | org.apache.hadoop.hbase.mapreduce.TestImportTsv |
|   | org.apache.hadoop.hbase.io.encoding.TestEncodedSeekers |
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|| Subsystem || Report/Notes ||
| JIRA Patch URL | https://issues.apache.org/jira/secure/attachment/12793741/HBASE-9393.v15.patch
|
| JIRA Issue | HBASE-9393 |
| Optional Tests |  asflicense  javac  javadoc  unit  findbugs  hadoopcheck  hbaseanti  checkstyle
 compile  |
| uname | Linux proserpina.apache.org 3.13.0-36-lowlatency #63-Ubuntu SMP PREEMPT Wed Sep
3 21:56:12 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux |
| Build tool | maven |
| Personality | /home/jenkins/jenkins-slave/workspace/PreCommit-HBASE-Build@2/component/dev-support/hbase-personality.sh
|
| git revision | master / f120602 |
| Default Java | 1.7.0_79 |
| Multi-JDK versions |  /home/jenkins/tools/java/jdk1.8.0:1.8.0 /usr/local/jenkins/java/jdk1.7.0_79:1.7.0_79
|
| findbugs | v3.0.0 |
| unit | https://builds.apache.org/job/PreCommit-HBASE-Build/1013/artifact/patchprocess/patch-unit-hbase-server-jdk1.8.0.txt
|
| unit | https://builds.apache.org/job/PreCommit-HBASE-Build/1013/artifact/patchprocess/patch-unit-hbase-server-jdk1.7.0_79.txt
|
| unit test logs |  https://builds.apache.org/job/PreCommit-HBASE-Build/1013/artifact/patchprocess/patch-unit-hbase-server-jdk1.8.0.txt
https://builds.apache.org/job/PreCommit-HBASE-Build/1013/artifact/patchprocess/patch-unit-hbase-server-jdk1.7.0_79.txt
|
| JDK v1.7.0_79  Test Results | https://builds.apache.org/job/PreCommit-HBASE-Build/1013/testReport/
|
| modules | C: hbase-server U: hbase-server |
| Console output | https://builds.apache.org/job/PreCommit-HBASE-Build/1013/console |
| Powered by | Apache Yetus 0.2.0   http://yetus.apache.org |


This message was automatically generated.



> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> --------------------------------------------------------------------
>
>                 Key: HBASE-9393
>                 URL: https://issues.apache.org/jira/browse/HBASE-9393
>             Project: HBase
>          Issue Type: Bug
>    Affects Versions: 0.94.2, 0.98.0
>         Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 7279 regions
>            Reporter: Avi Zrachya
>            Assignee: Ashish Singhi
>            Priority: Critical
>             Fix For: 2.0.0
>
>         Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, HBASE-9393.v10.patch, HBASE-9393.v11.patch,
HBASE-9393.v12.patch, HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, HBASE-9393.v2.patch,
HBASE-9393.v3.patch, HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch,
HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch,
HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect to the
datanode because too many mapped sockets from one host to another on the same port.
> The example below is with low CLOSE_WAIT count because we had to restart hbase to solve
the porblem, later in time it will incease to 60-100K sockets on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root     17255 17219  0 12:26 pts/0    00:00:00 grep 21592
> hbase    21592     1 17 Aug29 ?        03:29:06 /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill
-9 %p -Xmx8000m -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode -Dhbase.log.dir=/var/log/hbase
-Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



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