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From "Hadoop QA (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (HBASE-8806) Row locks are acquired repeatedly in HRegion.doMiniBatchMutation for duplicate rows.
Date Thu, 04 Jul 2013 17:13:48 GMT

    [ https://issues.apache.org/jira/browse/HBASE-8806?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13700226#comment-13700226
] 

Hadoop QA commented on HBASE-8806:
----------------------------------

{color:red}-1 overall{color}.  Here are the results of testing the latest attachment 
  http://issues.apache.org/jira/secure/attachment/12590906/HBASE-8806-threadBasedRowLocks-v2.patch
  against trunk revision .

    {color:green}+1 @author{color}.  The patch does not contain any @author tags.

    {color:green}+1 tests included{color}.  The patch appears to include 9 new or modified
tests.

    {color:green}+1 hadoop1.0{color}.  The patch compiles against the hadoop 1.0 profile.

    {color:green}+1 hadoop2.0{color}.  The patch compiles against the hadoop 2.0 profile.

    {color:red}-1 javadoc{color}.  The javadoc tool appears to have generated 2 warning messages.

    {color:green}+1 javac{color}.  The applied patch does not increase the total number of
javac compiler warnings.

    {color:green}+1 findbugs{color}.  The patch does not introduce any new Findbugs (version
1.3.9) warnings.

    {color:green}+1 release audit{color}.  The applied patch does not increase the total number
of release audit warnings.

    {color:red}-1 lineLengths{color}.  The patch introduces lines longer than 100

  {color:green}+1 site{color}.  The mvn site goal succeeds with this patch.

     {color:red}-1 core tests{color}.  The patch failed these unit tests:
                       org.apache.hadoop.hbase.replication.TestReplicationQueueFailoverCompressed

Test results: https://builds.apache.org/job/PreCommit-HBASE-Build/6218//testReport/
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/6218//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-prefix-tree.html
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/6218//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-client.html
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/6218//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-common.html
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/6218//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-protocol.html
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/6218//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-server.html
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/6218//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-hadoop1-compat.html
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/6218//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-examples.html
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/6218//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-hadoop-compat.html
Console output: https://builds.apache.org/job/PreCommit-HBASE-Build/6218//console

This message is automatically generated.
                
> Row locks are acquired repeatedly in HRegion.doMiniBatchMutation for duplicate rows.
> ------------------------------------------------------------------------------------
>
>                 Key: HBASE-8806
>                 URL: https://issues.apache.org/jira/browse/HBASE-8806
>             Project: HBase
>          Issue Type: Bug
>          Components: regionserver
>    Affects Versions: 0.94.5
>            Reporter: rahul gidwani
>            Priority: Critical
>             Fix For: 0.95.2, 0.94.10
>
>         Attachments: 8806-0.94-v4.txt, 8806-0.94-v5.txt, 8806-0.94-v6.txt, HBASE-8806-0.94.10.patch,
HBASE-8806-0.94.10-v2.patch, HBASE-8806-0.94.10-v3.patch, HBASE-8806.patch, HBASE-8806-threadBasedRowLocks.patch,
HBASE-8806-threadBasedRowLocks-v2.patch
>
>
> If we already have the lock in the doMiniBatchMutation we don't need to re-acquire it.
The solution would be to keep a cache of the rowKeys already locked for a miniBatchMutation
and If we already have the 
> rowKey in the cache, we don't repeatedly try and acquire the lock.  A fix to this problem
would be to keep a set of rows we already locked and not try to acquire the lock for these
rows.  
> We have tested this fix in our production environment and has improved replication performance
quite a bit.  We saw a replication batch go from 3+ minutes to less than 10 seconds for batches
with duplicate row keys.
> {code}
> static final int ACQUIRE_LOCK_COUNT = 0;
>   @Test
>   public void testRedundantRowKeys() throws Exception {
>     final int batchSize = 100000;
>     
>     String tableName = getClass().getSimpleName();
>     Configuration conf = HBaseConfiguration.create();
>     conf.setClass(HConstants.REGION_IMPL, MockHRegion.class, HeapSize.class);
>     MockHRegion region = (MockHRegion) TestHRegion.initHRegion(Bytes.toBytes(tableName),
tableName, conf, Bytes.toBytes("a"));
>     List<Pair<Mutation, Integer>> someBatch = Lists.newArrayList();
>     int i = 0;
>     while (i < batchSize) {
>       if (i % 2 == 0) {
>         someBatch.add(new Pair<Mutation, Integer>(new Put(Bytes.toBytes(0)), null));
>       } else {
>         someBatch.add(new Pair<Mutation, Integer>(new Put(Bytes.toBytes(1)), null));
>       }
>       i++;
>     }
>     long startTime = System.currentTimeMillis();
>     region.batchMutate(someBatch.toArray(new Pair[0]));
>     long endTime = System.currentTimeMillis();
>     long duration = endTime - startTime;
>     System.out.println("duration: " + duration + " ms");
>     assertEquals(2, ACQUIRE_LOCK_COUNT);
>   }
>   @Override
>   public Integer getLock(Integer lockid, byte[] row, boolean waitForLock) throws IOException
{
>     ACQUIRE_LOCK_COUNT++;
>     return super.getLock(lockid, row, waitForLock);
>   }
> {code}

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