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From "Hadoop QA (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (HBASE-6691) HFile quarantine fails with missing files in hadoop 2.0
Date Thu, 30 Aug 2012 02:23:07 GMT

    [ https://issues.apache.org/jira/browse/HBASE-6691?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13444619#comment-13444619
] 

Hadoop QA commented on HBASE-6691:
----------------------------------

-1 overall.  Here are the results of testing the latest attachment 
  http://issues.apache.org/jira/secure/attachment/12543012/6691.patch
  against trunk revision .

    +1 @author.  The patch does not contain any @author tags.

    -1 tests included.  The patch doesn't appear to include any new or modified tests.
                        Please justify why no new tests are needed for this patch.
                        Also please list what manual steps were performed to verify this patch.

    +1 hadoop2.0.  The patch compiles against the hadoop 2.0 profile.

    -1 javadoc.  The javadoc tool appears to have generated 110 warning messages.

    -1 javac.  The applied patch generated 5 javac compiler warnings (more than the trunk's
current 4 warnings).

    -1 findbugs.  The patch appears to introduce 9 new Findbugs (version 1.3.9) warnings.

    +1 release audit.  The applied patch does not increase the total number of release audit
warnings.

    +1 core tests.  The patch passed unit tests in .

Test results: https://builds.apache.org/job/PreCommit-HBASE-Build/2734//testReport/
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/2734//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-hadoop2-compat.html
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/2734//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-hadoop1-compat.html
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/2734//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-common.html
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/2734//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-hadoop-compat.html
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/2734//artifact/trunk/patchprocess/newPatchFindbugsWarningshbase-server.html
Console output: https://builds.apache.org/job/PreCommit-HBASE-Build/2734//console

This message is automatically generated.
                
> HFile quarantine fails with missing files in hadoop 2.0
> -------------------------------------------------------
>
>                 Key: HBASE-6691
>                 URL: https://issues.apache.org/jira/browse/HBASE-6691
>             Project: HBase
>          Issue Type: Bug
>    Affects Versions: 0.96.0
>            Reporter: Jonathan Hsieh
>            Assignee: Jonathan Hsieh
>             Fix For: 0.96.0
>
>         Attachments: 6691.patch
>
>
> Trunk/0.96 has a specific issue mentioned in HBASE-6686 when run against hadoop 2.0.
  This addresses this problem.
> {code}
> 2012-08-29 12:55:26,031 ERROR [IPC Server handler 0 on 41070] security.UserGroupInformation(1235):
PriviledgedActionException as:jon (auth:SIMPLE) cause:java.io.FileNotFoundException: File
does not exist: /user/jon/hbase/testQuarantineMissingHFile/4332ea87d02d33e443550537722ff4fc/fam/befbe65ff30e4a46866f04a5671f0e44
> 2012-08-29 12:55:26,085 WARN  [Thread-2994] hbck.HFileCorruptionChecker(253): Failed
to quaratine an HFile in regiondir hdfs://localhost:41070/user/jon/hbase/testQuarantineMissingHFile/4332ea87d02d33e443550537722ff4fc
> java.lang.reflect.UndeclaredThrowableException
> 	at $Proxy23.getBlockLocations(Unknown Source)
> 	at org.apache.hadoop.hdfs.DFSClient.callGetBlockLocations(DFSClient.java:882)
> 	at org.apache.hadoop.hdfs.DFSInputStream.fetchLocatedBlocksAndGetLastBlockLength(DFSInputStream.java:152)
> 	at org.apache.hadoop.hdfs.DFSInputStream.openInfo(DFSInputStream.java:119)
> 	at org.apache.hadoop.hdfs.DFSInputStream.&lt;init&gt;(DFSInputStream.java:112)
> 	at org.apache.hadoop.hdfs.DFSClient.open(DFSClient.java:955)
> 	at org.apache.hadoop.hdfs.DistributedFileSystem.open(DistributedFileSystem.java:212)
> 	at org.apache.hadoop.hdfs.DistributedFileSystem.open(DistributedFileSystem.java:75)
> 	at org.apache.hadoop.fs.FileSystem.open(FileSystem.java:664)
> 	at org.apache.hadoop.hbase.io.hfile.HFile.createReaderWithEncoding(HFile.java:575)
> 	at org.apache.hadoop.hbase.io.hfile.HFile.createReader(HFile.java:605)
> 	at org.apache.hadoop.hbase.util.hbck.HFileCorruptionChecker.checkHFile(HFileCorruptionChecker.java:94)
> 	at org.apache.hadoop.hbase.util.TestHBaseFsck$1$1.checkHFile(TestHBaseFsck.java:1401)
> 	at org.apache.hadoop.hbase.util.hbck.HFileCorruptionChecker.checkColFamDir(HFileCorruptionChecker.java:175)
> 	at org.apache.hadoop.hbase.util.hbck.HFileCorruptionChecker.checkRegionDir(HFileCorruptionChecker.java:208)
> 	at org.apache.hadoop.hbase.util.hbck.HFileCorruptionChecker$RegionDirChecker.call(HFileCorruptionChecker.java:290)
> 	at org.apache.hadoop.hbase.util.hbck.HFileCorruptionChecker$RegionDirChecker.call(HFileCorruptionChecker.java:281)
> 	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
> 	at java.util.concurrent.FutureTask.run(FutureTask.java:138)
> 	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
> 	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
> 	at java.util.concurrent.FutureTask.run(FutureTask.java:138)
> 	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(ScheduledThreadPoolExecutor.java:98)
> 	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:206)
> 	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
> 	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
> 	at java.lang.Thread.run(Thread.java:662)
> Caused by: java.lang.reflect.InvocationTargetException
> 	at sun.reflect.GeneratedMethodAccessor27.invoke(Unknown Source)
> 	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
> 	at java.lang.reflect.Method.invoke(Method.java:597)
> 	at org.apache.hadoop.hbase.fs.HFileSystem$1.invoke(HFileSystem.java:261)
> 	... 27 more
> Caused by: java.io.FileNotFoundException: File does not exist: /user/jon/hbase/testQuarantineMissingHFile/4332ea87d02d33e443550537722ff4fc/fam/befbe65ff30e4a46866f04a5671f0e44
> 	at org.apache.hadoop.hdfs.server.namenode.FSNamesystem.getBlockLocationsUpdateTimes(FSNamesystem.java:1133)
> 	at org.apache.hadoop.hdfs.server.namenode.FSNamesystem.getBlockLocations(FSNamesystem.java:1095)
> 	at org.apache.hadoop.hdfs.server.namenode.FSNamesystem.getBlockLocations(FSNamesystem.java:1067)
> 	at org.apache.hadoop.hdfs.server.namenode.NameNodeRpcServer.getBlockLocations(NameNodeRpcServer.java:384)
> 	at org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolServerSideTranslatorPB.getBlockLocations(ClientNamenodeProtocolServerSideTranslatorPB.java:165)
> 	at org.apache.hadoop.hdfs.protocol.proto.ClientNamenodeProtocolProtos$ClientNamenodeProtocol$2.callBlockingMethod(ClientNamenodeProtocolProtos.java:42586)
> 	at org.apache.hadoop.ipc.ProtobufRpcEngine$Server$ProtoBufRpcInvoker.call(ProtobufRpcEngine.java:427)
> 	at org.apache.hadoop.ipc.RPC$Server.call(RPC.java:916)
> 	at org.apache.hadoop.ipc.Server$Handler$1.run(Server.java:1692)
> 	at org.apache.hadoop.ipc.Server$Handler$1.run(Server.java:1688)
> 	at java.security.AccessController.doPrivileged(Native Method)
> 	at javax.security.auth.Subject.doAs(Subject.java:396)
> 	at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1232)
> 	at org.apache.hadoop.ipc.Server$Handler.run(Server.java:1686)
> 	at org.apache.hadoop.ipc.Client.call(Client.java:1161)
> 	at org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:184)
> 	at $Proxy17.getBlockLocations(Unknown Source)
> 	at sun.reflect.GeneratedMethodAccessor26.invoke(Unknown Source)
> 	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
> 	at java.lang.reflect.Method.invoke(Method.java:597)
> 	at org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:165)
> 	at org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:84)
> 	at $Proxy17.getBlockLocations(Unknown Source)
> 	at org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolTranslatorPB.getBlockLocations(ClientNamenodeProtocolTranslatorPB.java:149)
> 	... 31 more
> {code}

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