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From "Hadoop QA (Commented) (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (HBASE-5139) Compute (weighted) median using AggregateProtocol
Date Tue, 10 Jan 2012 19:16:40 GMT

    [ https://issues.apache.org/jira/browse/HBASE-5139?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13183488#comment-13183488
] 

Hadoop QA commented on HBASE-5139:
----------------------------------

-1 overall.  Here are the results of testing the latest attachment 
  http://issues.apache.org/jira/secure/attachment/12510076/5139-v2.txt
  against trunk revision .

    +1 @author.  The patch does not contain any @author tags.

    +1 tests included.  The patch appears to include 3 new or modified tests.

    -1 javadoc.  The javadoc tool appears to have generated -151 warning messages.

    +1 javac.  The applied patch does not increase the total number of javac compiler warnings.

    -1 findbugs.  The patch appears to introduce 81 new Findbugs (version 1.3.9) warnings.

    +1 release audit.  The applied patch does not increase the total number of release audit
warnings.

     -1 core tests.  The patch failed these unit tests:
                       org.apache.hadoop.hbase.mapreduce.TestImportTsv
                  org.apache.hadoop.hbase.mapred.TestTableMapReduce
                  org.apache.hadoop.hbase.mapreduce.TestHFileOutputFormat

Test results: https://builds.apache.org/job/PreCommit-HBASE-Build/721//testReport/
Findbugs warnings: https://builds.apache.org/job/PreCommit-HBASE-Build/721//artifact/trunk/patchprocess/newPatchFindbugsWarnings.html
Console output: https://builds.apache.org/job/PreCommit-HBASE-Build/721//console

This message is automatically generated.
                
> Compute (weighted) median using AggregateProtocol
> -------------------------------------------------
>
>                 Key: HBASE-5139
>                 URL: https://issues.apache.org/jira/browse/HBASE-5139
>             Project: HBase
>          Issue Type: Sub-task
>            Reporter: Zhihong Yu
>            Assignee: Zhihong Yu
>         Attachments: 5139-v2.txt
>
>
> Suppose cf:cq1 stores numeric values and optionally cf:cq2 stores weights. This task
finds out the median value among the values of cf:cq1 (See http://www.stat.ucl.ac.be/ISdidactique/Rhelp/library/R.basic/html/weighted.median.html)
> This can be done in two passes.
> The first pass utilizes AggregateProtocol where the following tuple is returned from
each region:
> (partial-sum-of-values, partial-sum-of-weights)
> The start rowkey (supplied by coprocessor framework) would be used to sort the tuples.
This way we can determine which region (called R) contains the (weighted) median. partial-sum-of-weights
can be 0 if unweighted median is sought
> The second pass involves scanning the table, beginning with startrow of region R and
computing partial (weighted) sum until the threshold of S/2 is crossed. The (weighted) median
is returned.
> However, this approach wouldn't work if there is mutation in the underlying table between
pass one and pass two.
> In that case, sequential scanning seems to be the solution which is slower than the above
approach.

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