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From st...@apache.org
Subject svn commit: r658016 - in /hadoop/hbase/trunk: ./ src/java/org/apache/hadoop/hbase/ src/java/org/apache/hadoop/hbase/client/ src/java/org/apache/hadoop/hbase/master/ src/java/org/apache/hadoop/hbase/regionserver/ src/java/org/apache/hadoop/hbase/util/ s...
Date Mon, 19 May 2008 22:46:50 GMT
Author: stack
Date: Mon May 19 15:46:50 2008
New Revision: 658016

URL: http://svn.apache.org/viewvc?rev=658016&view=rev
Log:
HBASE-623 migration script for hbase-82

Added:
    hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/TestClassMigration.java
Modified:
    hadoop/hbase/trunk/CHANGES.txt
    hadoop/hbase/trunk/build.xml
    hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/HColumnDescriptor.java
    hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/HConstants.java
    hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/client/HConnectionManager.java
    hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/client/HTable.java
    hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/master/BaseScanner.java
    hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HRegionServer.java
    hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HStore.java
    hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HStoreFile.java
    hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/util/Bytes.java
    hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/TestSerialization.java
    hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
    hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/util/TestMigrate.java

Modified: hadoop/hbase/trunk/CHANGES.txt
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/CHANGES.txt?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/CHANGES.txt (original)
+++ hadoop/hbase/trunk/CHANGES.txt Mon May 19 15:46:50 2008
@@ -15,6 +15,7 @@
    HBASE-624   Master will shut down if number of active region servers is zero
                even if shutdown was not requested
    HBASE-629   Split reports incorrect elapsed time
+   HBASE-623   Migration script for hbase-82
 
   IMPROVEMENTS
    HBASE-559   MR example job to count table rows

Modified: hadoop/hbase/trunk/build.xml
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/build.xml?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/build.xml (original)
+++ hadoop/hbase/trunk/build.xml Mon May 19 15:46:50 2008
@@ -30,6 +30,7 @@
 
   <property name="src.dir"  location="${basedir}/src/java"/>
   <property name="src.test" location="${basedir}/src/test"/>
+  <property name="src.testdata" location="${basedir}/src/testdata"/>
   <property name="src.examples" location="${basedir}/src/examples"/>
   <property name="src.webapps" location="${basedir}/src/webapps"/>
 
@@ -379,6 +380,7 @@
       
       <sysproperty key="test.build.data" value="${build.test}/data"/>
       <sysproperty key="build.test" value="${build.test}"/>
+      <sysproperty key="src.testdata" value="${src.testdata}"/>
       <sysproperty key="contrib.name" value="${name}"/>
       
       <sysproperty key="user.dir" value="${build.test}/data"/>

Modified: hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/HColumnDescriptor.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/HColumnDescriptor.java?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/HColumnDescriptor.java (original)
+++ hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/HColumnDescriptor.java Mon May 19
15:46:50 2008
@@ -335,6 +335,9 @@
       Text t = new Text();
       t.readFields(in);
       this.name = t.getBytes();
+      if (HStoreKey.getFamilyDelimiterIndex(this.name) > 0) {
+        this.name = stripColon(this.name);
+      }
     } else {
       this.name = Bytes.readByteArray(in);
     }

Modified: hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/HConstants.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/HConstants.java?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/HConstants.java (original)
+++ hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/HConstants.java Mon May 19 15:46:50
2008
@@ -202,4 +202,8 @@
    * Unlimited time-to-live.
    */
   static final int FOREVER = -1;
-}
+  
+  public static final String HBASE_CLIENT_RETRIES_NUMBER_KEY =
+    "hbase.client.retries.number";
+  public static final int DEFAULT_CLIENT_RETRIES = 5;
+}
\ No newline at end of file

Modified: hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/client/HConnectionManager.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/client/HConnectionManager.java?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/client/HConnectionManager.java (original)
+++ hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/client/HConnectionManager.java Mon
May 19 15:46:50 2008
@@ -157,19 +157,16 @@
       this.masterChecked = false;
       this.servers = new ConcurrentHashMap<String, HRegionInterface>();
     }
-    
+
     /** {@inheritDoc} */
     public HMasterInterface getMaster() throws MasterNotRunningException {
+      HServerAddress masterLocation = null;
       synchronized (this.masterLock) {
-        for (int tries = 0;
-          !this.closed &&
-          !this.masterChecked && this.master == null &&
-          tries < numRetries;
-        tries++) {
-          
-          HServerAddress masterLocation = new HServerAddress(this.conf.get(
-              MASTER_ADDRESS, DEFAULT_MASTER_ADDRESS));
-
+        for (int tries = 0; !this.closed &&
+            !this.masterChecked && this.master == null && tries < numRetries;
+          tries++) {
+          String m = this.conf.get(MASTER_ADDRESS, DEFAULT_MASTER_ADDRESS);
+          masterLocation = new HServerAddress(m);
           try {
             HMasterInterface tryMaster = (HMasterInterface)HbaseRPC.getProxy(
                 HMasterInterface.class, HMasterInterface.versionID, 
@@ -181,12 +178,12 @@
             }
             
           } catch (IOException e) {
-            if(tries == numRetries - 1) {
+            if (tries == numRetries - 1) {
               // This was our last chance - don't bother sleeping
               break;
             }
             LOG.info("Attempt " + tries + " of " + this.numRetries +
-                " failed with <" + e + ">. Retrying after sleep of " + this.pause);
+              " failed with <" + e + ">. Retrying after sleep of " + this.pause);
           }
 
           // We either cannot connect to master or it is not running. Sleep & retry
@@ -200,7 +197,8 @@
         this.masterChecked = true;
       }
       if (this.master == null) {
-        throw new MasterNotRunningException();
+        throw new MasterNotRunningException(masterLocation == null? "":
+          masterLocation.toString());
       }
       return this.master;
     }
@@ -323,12 +321,11 @@
           // This block guards against two threads trying to find the root
           // region at the same time. One will go do the find while the 
           // second waits. The second thread will not do find.
-          
           if (!useCache || rootRegionLocation == null) {
             return locateRootRegion();
           }
           return rootRegionLocation;
-        }        
+        }
       } else if (Bytes.equals(tableName, META_TABLE_NAME)) {
         synchronized (metaRegionLock) {
           // This block guards against two threads trying to load the meta 
@@ -655,30 +652,29 @@
      */
     private HRegionLocation locateRootRegion()
     throws IOException {
-    
       getMaster();
-      
       HServerAddress rootRegionAddress = null;
-      
       for (int tries = 0; tries < numRetries; tries++) {
         int localTimeouts = 0;
-        
-        // ask the master which server has the root region
+        // Ask the master which server has the root region
         while (rootRegionAddress == null && localTimeouts < numRetries) {
           rootRegionAddress = master.findRootRegion();
           if (rootRegionAddress == null) {
-            try {
-              if (LOG.isDebugEnabled()) {
-                LOG.debug("Sleeping. Waiting for root region.");
-              }
-              Thread.sleep(pause);
-              if (LOG.isDebugEnabled()) {
-                LOG.debug("Wake. Retry finding root region.");
+            // Increment and then only sleep if retries left.
+            if (++localTimeouts < numRetries) {
+              try {
+                if (LOG.isDebugEnabled()) {
+                  LOG.debug("Sleeping " + pause + "ms. Waiting for root "
+                      + "region. Attempt " + tries + " of " + numRetries);
+                }
+                Thread.sleep(pause);
+                if (LOG.isDebugEnabled()) {
+                  LOG.debug("Wake. Retry finding root region.");
+                }
+              } catch (InterruptedException iex) {
+                // continue
               }
-            } catch (InterruptedException iex) {
-              // continue
             }
-            localTimeouts++;
           }
         }
         

Modified: hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/client/HTable.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/client/HTable.java?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/client/HTable.java (original)
+++ hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/client/HTable.java Mon May 19 15:46:50
2008
@@ -526,6 +526,23 @@
   }
 
   /** 
+   * Get a scanner on the current table starting at first row.
+   * Return the specified columns.
+   *
+   * @param columns columns to scan. If column name is a column family, all
+   * columns of the specified column family are returned.  Its also possible
+   * to pass a regex in the column qualifier. A column qualifier is judged to
+   * be a regex if it contains at least one of the following characters:
+   * <code>\+|^&*$[]]}{)(</code>.
+   * @return scanner
+   * @throws IOException
+   */
+  public Scanner getScanner(final Text [] columns)
+  throws IOException {
+    return getScanner(Bytes.toByteArrays(columns), HConstants.EMPTY_START_ROW);
+  }
+
+  /** 
    * Get a scanner on the current table starting at the specified row.
    * Return the specified columns.
    *
@@ -542,7 +559,25 @@
   throws IOException {
     return getScanner(Bytes.toByteArrays(columns), startRow.getBytes());
   }
-  
+
+  /** 
+   * Get a scanner on the current table starting at first row.
+   * Return the specified columns.
+   *
+   * @param columns columns to scan. If column name is a column family, all
+   * columns of the specified column family are returned.  Its also possible
+   * to pass a regex in the column qualifier. A column qualifier is judged to
+   * be a regex if it contains at least one of the following characters:
+   * <code>\+|^&*$[]]}{)(</code>.
+   * @return scanner
+   * @throws IOException
+   */
+  public Scanner getScanner(final byte[][] columns)
+  throws IOException {
+    return getScanner(columns, HConstants.EMPTY_START_ROW,
+      HConstants.LATEST_TIMESTAMP, null);
+  }
+
   /** 
    * Get a scanner on the current table starting at the specified row.
    * Return the specified columns.
@@ -875,7 +910,7 @@
     throws IOException {
       if (LOG.isDebugEnabled()) {
         LOG.debug("Creating scanner over " + Bytes.toString(tableName) +
-          " starting at key '" + startRow + "'");
+          " starting at key '" + Bytes.toString(startRow) + "'");
       }
       // save off the simple parameters
       this.columns = columns;
@@ -921,7 +956,8 @@
       byte [] localStartKey = oldRegion == null? startRow: oldRegion.getEndKey();
 
       if (LOG.isDebugEnabled()) {
-        LOG.debug("Advancing internal scanner to startKey " + localStartKey);
+        LOG.debug("Advancing internal scanner to startKey at " +
+          Bytes.toString(localStartKey));
       }
             
       try {

Modified: hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/master/BaseScanner.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/master/BaseScanner.java?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/master/BaseScanner.java (original)
+++ hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/master/BaseScanner.java Mon May 19
15:46:50 2008
@@ -277,7 +277,7 @@
       result = true;
     } else if (LOG.isDebugEnabled()) {
       // If debug, note we checked and current state of daughters.
-      LOG.debug("Checked " + parent.getRegionName() +
+      LOG.debug("Checked " + parent.getRegionNameAsString() +
         " for references: splitA: " + hasReferencesA + ", splitB: "+
         hasReferencesB);
     }

Modified: hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HRegionServer.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HRegionServer.java?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HRegionServer.java (original)
+++ hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HRegionServer.java Mon
May 19 15:46:50 2008
@@ -943,7 +943,7 @@
     }
     for(HRegion region: regionsToClose) {
       if (LOG.isDebugEnabled()) {
-        LOG.debug("closing region " + region.getRegionName());
+        LOG.debug("closing region " + Bytes.toString(region.getRegionName()));
       }
       try {
         region.close();

Modified: hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HStore.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HStore.java?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HStore.java (original)
+++ hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HStore.java Mon May 19
15:46:50 2008
@@ -384,7 +384,7 @@
       HStoreFile curfile = null;
       HStoreFile.Reference reference = null;
       if (isReference) {
-        reference = readSplitInfo(p, fs);
+        reference = HStoreFile.readSplitInfo(p, fs);
       }
       curfile = new HStoreFile(conf, fs, basedir, info.getEncodedName(),
         family.getName(), fid, reference);
@@ -1773,21 +1773,6 @@
     return this.storeNameStr;
   }
 
-  /*
-   * @see writeSplitInfo(Path p, HStoreFile hsf, FileSystem fs)
-   */
-  static HStoreFile.Reference readSplitInfo(final Path p, final FileSystem fs)
-  throws IOException {
-    FSDataInputStream in = fs.open(p);
-    try {
-      HStoreFile.Reference r = new HStoreFile.Reference();
-      r.readFields(in);
-      return r;
-    } finally {
-      in.close();
-    }
-  }
-
   /**
    * @param p Path to check.
    * @return True if the path has format of a HStoreFile reference.

Modified: hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HStoreFile.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HStoreFile.java?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HStoreFile.java (original)
+++ hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/regionserver/HStoreFile.java Mon May
19 15:46:50 2008
@@ -281,7 +281,22 @@
       out.close();
    }
   }
-  
+
+  /**
+   * @see #writeSplitInfo(FileSystem fs)
+   */
+  static HStoreFile.Reference readSplitInfo(final Path p, final FileSystem fs)
+  throws IOException {
+    FSDataInputStream in = fs.open(p);
+    try {
+      HStoreFile.Reference r = new HStoreFile.Reference();
+      r.readFields(in);
+      return r;
+    } finally {
+      in.close();
+    }
+  }
+
   private void createOrFail(final FileSystem fs, final Path p)
   throws IOException {
     if (fs.exists(p)) {
@@ -585,6 +600,12 @@
 
     /** {@inheritDoc} */
     public void write(DataOutput out) throws IOException {
+      // Write out the encoded region name as a String.  Doing it as a String
+      // keeps a Reference's serialziation backword compatible with
+      // pre-HBASE-82 serializations.  ALternative is rewriting all
+      // info files in hbase (Serialized References are written into the
+      // 'info' file that accompanies HBase Store files).
+      out.writeUTF(Integer.toString(encodedRegionName));
       out.writeInt(this.encodedRegionName);
       out.writeLong(fileid);
       // Write true if we're doing top of the file.
@@ -594,7 +615,7 @@
 
     /** {@inheritDoc} */
     public void readFields(DataInput in) throws IOException {
-      this.encodedRegionName = in.readInt();
+      this.encodedRegionName = Integer.parseInt(in.readUTF());
       fileid = in.readLong();
       boolean tmp = in.readBoolean();
       // If true, set region to top.

Modified: hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/util/Bytes.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/util/Bytes.java?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/util/Bytes.java (original)
+++ hadoop/hbase/trunk/src/java/org/apache/hadoop/hbase/util/Bytes.java Mon May 19 15:46:50
2008
@@ -11,6 +11,7 @@
 import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
 import org.apache.hadoop.io.Text;
 import org.apache.hadoop.io.WritableComparator;
+import org.apache.hadoop.io.WritableUtils;
 
 public class Bytes {
   /**
@@ -40,8 +41,12 @@
    */
   public static byte [] readByteArray(final DataInput in)
   throws IOException {
-    byte [] result = new byte[in.readInt()];
-    in.readFully(result, 0, result.length);
+    int len = WritableUtils.readVInt(in);
+    if (len < 0) {
+      throw new NegativeArraySizeException(Integer.toString(len));
+    }
+    byte [] result = new byte[len];
+    in.readFully(result, 0, len);
     return result;
   }
   
@@ -52,7 +57,7 @@
    */
   public static void writeByteArray(final DataOutput out, final byte [] b)
   throws IOException {
-    out.writeInt(b.length);
+    WritableUtils.writeVInt(out, b.length);
     out.write(b, 0, b.length);
   }
   

Added: hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/TestClassMigration.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/TestClassMigration.java?rev=658016&view=auto
==============================================================================
--- hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/TestClassMigration.java (added)
+++ hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/TestClassMigration.java Mon May 19
15:46:50 2008
@@ -0,0 +1,266 @@
+/**
+ * Copyright 2008 The Apache Software Foundation
+ *
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.hadoop.hbase;
+
+import java.io.DataInput;
+import java.io.DataOutput;
+import java.io.IOException;
+import java.io.UnsupportedEncodingException;
+
+import org.apache.hadoop.hbase.util.Bytes;
+import org.apache.hadoop.hbase.util.Writables;
+import org.apache.hadoop.io.Text;
+import org.apache.hadoop.io.WritableComparable;
+
+import junit.framework.TestCase;
+
+/**
+ * Test that individual classes can migrate themselves.
+ */
+public class TestClassMigration extends TestCase {
+  
+  /**
+   * Test we can migrate a 0.1 version of HSK.
+   * @throws Exception
+   */
+  public void testMigrateHStoreKey() throws Exception {
+    long now = System.currentTimeMillis();
+    byte [] nameBytes = Bytes.toBytes(getName());
+    Text nameText = new Text(nameBytes);
+    HStoreKey01Branch  hsk = new HStoreKey01Branch(nameText, nameText, now);
+    byte [] b = Writables.getBytes(hsk);
+    HStoreKey deserializedHsk =
+      (HStoreKey)Writables.getWritable(b, new HStoreKey());
+    assertEquals(deserializedHsk.getTimestamp(), hsk.getTimestamp());
+    assertTrue(Bytes.equals(nameBytes, deserializedHsk.getColumn()));
+    assertTrue(Bytes.equals(nameBytes, deserializedHsk.getRow()));
+  }
+  
+  /**
+   * HBase 0.1 branch HStoreKey.  Same in all regards except the utility
+   * methods have been removed.
+   * Used in test of HSK migration test.
+   */
+  private static class HStoreKey01Branch implements WritableComparable {
+    /**
+     * Colon character in UTF-8
+     */
+    public static final char COLUMN_FAMILY_DELIMITER = ':';
+    
+    private Text row;
+    private Text column;
+    private long timestamp;
+
+
+    /** Default constructor used in conjunction with Writable interface */
+    public HStoreKey01Branch() {
+      this(new Text());
+    }
+    
+    /**
+     * Create an HStoreKey specifying only the row
+     * The column defaults to the empty string and the time stamp defaults to
+     * Long.MAX_VALUE
+     * 
+     * @param row - row key
+     */
+    public HStoreKey01Branch(Text row) {
+      this(row, Long.MAX_VALUE);
+    }
+    
+    /**
+     * Create an HStoreKey specifying the row and timestamp
+     * The column name defaults to the empty string
+     * 
+     * @param row row key
+     * @param timestamp timestamp value
+     */
+    public HStoreKey01Branch(Text row, long timestamp) {
+      this(row, new Text(), timestamp);
+    }
+    
+    /**
+     * Create an HStoreKey specifying the row and column names
+     * The timestamp defaults to LATEST_TIMESTAMP
+     * 
+     * @param row row key
+     * @param column column key
+     */
+    public HStoreKey01Branch(Text row, Text column) {
+      this(row, column, HConstants.LATEST_TIMESTAMP);
+    }
+    
+    /**
+     * Create an HStoreKey specifying all the fields
+     * 
+     * @param row row key
+     * @param column column key
+     * @param timestamp timestamp value
+     */
+    public HStoreKey01Branch(Text row, Text column, long timestamp) {
+      // Make copies by doing 'new Text(arg)'.
+      this.row = new Text(row);
+      this.column = new Text(column);
+      this.timestamp = timestamp;
+    }
+    
+    /** @return Approximate size in bytes of this key. */
+    public long getSize() {
+      return this.row.getLength() + this.column.getLength() +
+        8 /* There is no sizeof in java. Presume long is 8 (64bit machine)*/;
+    }
+    
+    /**
+     * Constructs a new HStoreKey from another
+     * 
+     * @param other the source key
+     */
+    public HStoreKey01Branch(HStoreKey01Branch other) {
+      this(other.row, other.column, other.timestamp);
+    }
+    
+    /**
+     * Change the value of the row key
+     * 
+     * @param newrow new row key value
+     */
+    public void setRow(Text newrow) {
+      this.row.set(newrow);
+    }
+    
+    /**
+     * Change the value of the column key
+     * 
+     * @param newcol new column key value
+     */
+    public void setColumn(Text newcol) {
+      this.column.set(newcol);
+    }
+    
+    /**
+     * Change the value of the timestamp field
+     * 
+     * @param timestamp new timestamp value
+     */
+    public void setVersion(long timestamp) {
+      this.timestamp = timestamp;
+    }
+    
+    /**
+     * Set the value of this HStoreKey from the supplied key
+     * 
+     * @param k key value to copy
+     */
+    public void set(HStoreKey01Branch k) {
+      this.row = k.getRow();
+      this.column = k.getColumn();
+      this.timestamp = k.getTimestamp();
+    }
+    
+    /** @return value of row key */
+    public Text getRow() {
+      return row;
+    }
+    
+    /** @return value of column key */
+    public Text getColumn() {
+      return column;
+    }
+    
+    /** @return value of timestamp */
+    public long getTimestamp() {
+      return timestamp;
+    }
+
+    /** {@inheritDoc} */
+    @Override
+    public String toString() {
+      return row.toString() + "/" + column.toString() + "/" + timestamp;
+    }
+    
+    /** {@inheritDoc} */
+    @Override
+    public boolean equals(Object obj) {
+      return compareTo(obj) == 0;
+    }
+    
+    /** {@inheritDoc} */
+    @Override
+    public int hashCode() {
+      int result = this.row.hashCode();
+      result ^= this.column.hashCode();
+      result ^= this.timestamp;
+      return result;
+    }
+
+    // Comparable
+
+    public int compareTo(Object o) {
+      HStoreKey01Branch other = (HStoreKey01Branch)o;
+      int result = this.row.compareTo(other.row);
+      if (result != 0) {
+        return result;
+      }
+      result = this.column.compareTo(other.column);
+      if (result != 0) {
+        return result;
+      }
+      // The below older timestamps sorting ahead of newer timestamps looks
+      // wrong but it is intentional. This way, newer timestamps are first
+      // found when we iterate over a memcache and newer versions are the
+      // first we trip over when reading from a store file.
+      if (this.timestamp < other.timestamp) {
+        result = 1;
+      } else if (this.timestamp > other.timestamp) {
+        result = -1;
+      }
+      return result;
+    }
+
+    // Writable
+
+    /** {@inheritDoc} */
+    public void write(DataOutput out) throws IOException {
+      row.write(out);
+      column.write(out);
+      out.writeLong(timestamp);
+    }
+
+    /** {@inheritDoc} */
+    public void readFields(DataInput in) throws IOException {
+      row.readFields(in);
+      column.readFields(in);
+      timestamp = in.readLong();
+    }
+
+    /**
+     * Returns row and column bytes out of an HStoreKey.
+     * @param hsk Store key.
+     * @return byte array encoding of HStoreKey
+     * @throws UnsupportedEncodingException
+     */
+    public static byte[] getBytes(final HStoreKey hsk)
+    throws UnsupportedEncodingException {
+      StringBuilder s = new StringBuilder(hsk.getRow().toString());
+      s.append(hsk.getColumn().toString());
+      return s.toString().getBytes(HConstants.UTF8_ENCODING);
+    }
+  }
+}

Modified: hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/TestSerialization.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/TestSerialization.java?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/TestSerialization.java (original)
+++ hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/TestSerialization.java Mon May 19
15:46:50 2008
@@ -19,6 +19,7 @@
  */
 package org.apache.hadoop.hbase;
 
+
 import org.apache.hadoop.hbase.io.BatchOperation;
 import org.apache.hadoop.hbase.io.BatchUpdate;
 import org.apache.hadoop.hbase.io.Cell;
@@ -40,7 +41,7 @@
     super.tearDown();
   }
 
-  public void testname() throws Exception {
+  public void testHMsg() throws Exception {
     HMsg  m = new HMsg(HMsg.MSG_REGIONSERVER_QUIESCE);
     byte [] mb = Writables.getBytes(m);
     HMsg deserializedHMsg = (HMsg)Writables.getWritable(mb, new HMsg());

Modified: hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java (original)
+++ hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/regionserver/TestHStoreFile.java Mon
May 19 15:46:50 2008
@@ -153,7 +153,7 @@
     assertTrue(this.fs.exists(refHsf.getMapFilePath()));
     assertTrue(this.fs.exists(refHsf.getInfoFilePath()));
     HStoreFile.Reference otherReference =
-      HStore.readSplitInfo(refHsf.getInfoFilePath(), this.fs);
+      HStoreFile.readSplitInfo(refHsf.getInfoFilePath(), this.fs);
     assertEquals(reference.getEncodedRegionName(),
         otherReference.getEncodedRegionName());
     assertEquals(reference.getFileId(),

Modified: hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/util/TestMigrate.java
URL: http://svn.apache.org/viewvc/hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/util/TestMigrate.java?rev=658016&r1=658015&r2=658016&view=diff
==============================================================================
--- hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/util/TestMigrate.java (original)
+++ hadoop/hbase/trunk/src/test/org/apache/hadoop/hbase/util/TestMigrate.java Mon May 19 15:46:50
2008
@@ -20,57 +20,50 @@
 
 package org.apache.hadoop.hbase.util;
 
+import java.io.FileNotFoundException;
 import java.io.IOException;
-
-import java.util.zip.ZipInputStream;
 import java.util.zip.ZipEntry;
+import java.util.zip.ZipInputStream;
 
 import org.apache.commons.logging.Log;
 import org.apache.commons.logging.LogFactory;
 import org.apache.hadoop.dfs.MiniDFSCluster;
+import org.apache.hadoop.fs.FSDataInputStream;
+import org.apache.hadoop.fs.FSDataOutputStream;
 import org.apache.hadoop.fs.FileStatus;
 import org.apache.hadoop.fs.FileSystem;
 import org.apache.hadoop.fs.Path;
-import org.apache.hadoop.fs.FSDataInputStream;
-import org.apache.hadoop.fs.FSDataOutputStream;
-
 import org.apache.hadoop.hbase.HBaseTestCase;
 import org.apache.hadoop.hbase.HConstants;
-import org.apache.log4j.Level;
-import org.apache.log4j.Logger;
+import org.apache.hadoop.hbase.HTableDescriptor;
+import org.apache.hadoop.hbase.MiniHBaseCluster;
+import org.apache.hadoop.hbase.client.HBaseAdmin;
+import org.apache.hadoop.hbase.client.HConnectionManager;
+import org.apache.hadoop.hbase.client.HTable;
+import org.apache.hadoop.hbase.client.Scanner;
+import org.apache.hadoop.hbase.io.RowResult;
 
 /**
  * 
  */
 public class TestMigrate extends HBaseTestCase {
-  static final Log LOG = LogFactory.getLog(TestMigrate.class);
-
-  /**
-   * 
-   */
-  public TestMigrate() {
-    super();
-    Logger.getRootLogger().setLevel(Level.WARN);
-    Logger.getLogger(this.getClass().getPackage().getName()).
-      setLevel(Level.DEBUG);
-  }
+  private static final Log LOG = LogFactory.getLog(TestMigrate.class);
+  
+  // This is the name of the table that is in the data file.
+  private static final String TABLENAME = "TestUpgrade";
+  
+  // The table has two columns
+  private static final byte [][] TABLENAME_COLUMNS =
+    {Bytes.toBytes("column_a:"), Bytes.toBytes("column_b:")};
 
-  /** {@inheritDoc} */
-  @Override
-  protected void setUp() throws Exception {
-    super.setUp();
-  }
+  // Expected count of rows in migrated table.
+  private static final int EXPECTED_COUNT = 17576;
 
-  /** {@inheritDoc} */
-  @Override
-  protected void tearDown() throws Exception {
-    super.tearDown();
-  }
-  
   /**
+   * @throws IOException 
    * 
    */
-  public void testUpgrade() {
+  public void testUpgrade() throws IOException {
     MiniDFSCluster dfsCluster = null;
     try {
       dfsCluster = new MiniDFSCluster(conf, 2, true, (String[])null);
@@ -81,63 +74,46 @@
       Path root = dfs.makeQualified(new Path(conf.get(HConstants.HBASE_DIR)));
       dfs.mkdirs(root);
 
-      /*
-       * First load files from an old style HBase file structure
-       */
-      
-      // Current directory is .../project/build/test/data
-      
       FileSystem localfs = FileSystem.getLocal(conf);
-      
-      // Get path for zip file
-
-      FSDataInputStream hs = localfs.open(new Path(Path.CUR_DIR,
-          
-          // this path is for running test with ant
-          
-          "../../../src/testdata/HADOOP-2478-testdata.zip")
-      
-          // and this path is for when you want to run inside eclipse
-      
-          /*"src/testdata/HADOOP-2478-testdata.zip")*/
-      );
-      
+      // Get path for zip file.  If running this test in eclipse, define
+      // the system property src.testdata for your test run.
+      String srcTestdata = System.getProperty("src.testdata");
+      if (srcTestdata == null) {
+        throw new NullPointerException("Define src.test system property");
+      }
+      Path data = new Path(srcTestdata, "HADOOP-2478-testdata.zip");
+      if (!localfs.exists(data)) {
+        throw new FileNotFoundException(data.toString());
+      }
+      FSDataInputStream hs = localfs.open(data);
       ZipInputStream zip = new ZipInputStream(hs);
-      
       unzip(zip, dfs, root);
-      
       zip.close();
       hs.close();
-      
       listPaths(dfs, root, root.toString().length() + 1);
       
       Migrate u = new Migrate(conf);
       u.run(new String[] {"check"});
-
       listPaths(dfs, root, root.toString().length() + 1);
       
       u = new Migrate(conf);
       u.run(new String[] {"upgrade"});
-
       listPaths(dfs, root, root.toString().length() + 1);
       
       // Remove version file and try again
-      
       dfs.delete(new Path(root, HConstants.VERSION_FILE_NAME));
       u = new Migrate(conf);
       u.run(new String[] {"upgrade"});
-
       listPaths(dfs, root, root.toString().length() + 1);
       
       // Try again. No upgrade should be necessary
-      
       u = new Migrate(conf);
       u.run(new String[] {"check"});
       u = new Migrate(conf);
       u.run(new String[] {"upgrade"});
-
-    } catch (Exception e) {
-      e.printStackTrace();
+      
+      // Now verify that can read contents.
+      verify();
     } finally {
       if (dfsCluster != null) {
         shutdownDfs(dfsCluster);
@@ -145,14 +121,68 @@
     }
   }
 
+  /*
+   * Verify can read the migrated table.
+   * @throws IOException
+   */
+  private void verify() throws IOException {
+    // Delete any cached connections.  Need to do this because connection was
+    // created earlier when no master was around.  The fact that there was no
+    // master gets cached.  Need to delete so we go get master afresh.
+    HConnectionManager.deleteConnection(this.conf);
+    LOG.info("Start a cluster against migrated FS");
+    // Up number of retries.  Needed while cluster starts up. Its been set to 1
+    // above.
+    this.conf.setInt(HConstants.HBASE_CLIENT_RETRIES_NUMBER_KEY, 3);
+    MiniHBaseCluster cluster = new MiniHBaseCluster(this.conf, 1);
+    try {
+      HBaseAdmin hb = new HBaseAdmin(this.conf);
+      assertTrue(hb.isMasterRunning());
+      HTableDescriptor [] tables = hb.listTables();
+      boolean foundTable = false;
+      for (int i = 0; i < tables.length; i++) {
+        if (Bytes.equals(Bytes.toBytes(TABLENAME), tables[i].getName())) {
+          foundTable = true;
+          break;
+        }
+      }
+      assertTrue(foundTable);
+      LOG.info(TABLENAME + " exists.  Creating an HTable to go against " +
+        TABLENAME + " and master " + this.conf.get(HConstants.MASTER_ADDRESS));
+      HTable t = new HTable(this.conf, TABLENAME);
+      int count = 0;
+      try {
+        Thread.sleep(10000);
+      } catch (InterruptedException e) {
+        e.printStackTrace();
+      }
+      LOG.info("OPENING SCANNER");
+      Scanner s = t.getScanner(TABLENAME_COLUMNS);
+      try {
+        for (RowResult r: s) {
+          if (r == null || r.size() == 0) {
+            break;
+          }
+          count++;
+          if (count % 1000 == 0 && count > 0) {
+            LOG.info("Iterated over " + count + " rows.");
+          }
+        }
+        assertEquals(EXPECTED_COUNT, count);
+      } finally {
+        s.close();
+      }
+    } finally {
+      cluster.shutdown();
+    }
+  }
+
   private void unzip(ZipInputStream zip, FileSystem dfs, Path root)
   throws IOException {
-
     ZipEntry e = null;
     while ((e = zip.getNextEntry()) != null)  {
       if (e.isDirectory()) {
         dfs.mkdirs(new Path(root, e.getName()));
-        
       } else {
         FSDataOutputStream out = dfs.create(new Path(root, e.getName()));
         byte[] buffer = new byte[4096];
@@ -185,4 +215,4 @@
       }
     }
   }
-}
+}
\ No newline at end of file



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