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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: HBase-TRUNK-on-Hadoop-2.0.0 #865
Date Fri, 06 Dec 2013 09:19:31 GMT
See <https://builds.apache.org/job/HBase-TRUNK-on-Hadoop-2.0.0/865/changes>

Changes:

[apurtell] HBASE-10073. Revert HBASE-9718 (Add a test scope dependency on org.slf4j:slf4j-api
to hbase-client)

[stack] HBASE_9955 Make hadoop2 the default and deprecate hadoop1; RETRY

[stack] HBASE-9955 Make hadoop2 the default and deprecate hadoop1; REVERT

[stack] HBASE-9955 Make hadoop2 the default and deprecate hadoop1

[stack] HBASE-9955 Make hadoop2 the default and deprecate hadoop1

[jmhsieh] HBASE-10079 ADDENDUM javadoc fix

------------------------------------------
[...truncated 3029 lines...]
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/ResultScanner.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/replication
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/replication/ReplicationAdmin.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/HTableMultiplexer.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/ClusterStatusListener.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/HTableUtil.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/NoServerForRegionException.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/MetaScanner.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/HConnectionManager.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/Delete.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/Query.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/RegionOfflineException.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/HConnection.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/Append.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/RetriesExhaustedException.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/NonceGenerator.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/Result.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/RetryingCallable.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/client/ReversedClientScanner.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/PleaseHoldException.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/YouAreDeadException.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/RegionException.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/TableNotEnabledException.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/ZooKeeperConnectionException.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/HColumnDescriptor.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/TableExistsException.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/Server.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/ServerName.java
A         hbase-client/src/main/java/org/apache/hadoop/hbase/TableNotDisabledException.java
A         hbase-client/pom.xml
A         hbase-assembly
A         hbase-assembly/src
A         hbase-assembly/src/main
A         hbase-assembly/src/main/assembly
AU        hbase-assembly/src/main/assembly/hadoop-two-compat.xml
AU        hbase-assembly/src/main/assembly/components.xml
AU        hbase-assembly/src/main/assembly/src.xml
AU        hbase-assembly/src/main/assembly/hadoop-one-compat.xml
AU        hbase-assembly/pom.xml
A         NOTICE.txt
A         LICENSE.txt
A         .gitignore
 U        .
At revision 1548454
[HBase-TRUNK-on-Hadoop-2.0.0] $ /bin/bash -xe /tmp/hudson3374313616991790917.sh
+ uname -a
Linux minerva 3.2.0-51-generic #77-Ubuntu SMP Wed Jul 24 20:18:19 UTC 2013 x86_64 x86_64 x86_64
GNU/Linux
[HBase-TRUNK-on-Hadoop-2.0.0] $ /bin/bash -xe /tmp/hudson815984575019464605.sh
+ ulimit -a
core file size          (blocks, -c) 0
data seg size           (kbytes, -d) unlimited
scheduling priority             (-e) 0
file size               (blocks, -f) unlimited
pending signals                 (-i) 63721
max locked memory       (kbytes, -l) 64
max memory size         (kbytes, -m) unlimited
open files                      (-n) 4096
pipe size            (512 bytes, -p) 8
POSIX message queues     (bytes, -q) 819200
real-time priority              (-r) 0
stack size              (kbytes, -s) 8192
cpu time               (seconds, -t) unlimited
max user processes              (-u) 63721
virtual memory          (kbytes, -v) unlimited
file locks                      (-x) unlimited
+ rm -rf /tmp/hbase-jenkins/hbase
[trunk] $ /home/hudson/tools/maven/apache-maven-3.0.3/bin/mvn -PrunAllTests -Dmaven.test.redirectTestOutputToFile=true
install -Dsurefire.secondPartThreadCount=2 -Dhadoop.profile=2.0 -Dit.test=noTest
[INFO] Scanning for projects...
[ERROR] The build could not read 1 project -> [Help 1]
[ERROR]   
[ERROR]   The project org.apache.hbase:hbase:0.99.0-SNAPSHOT (<https://builds.apache.org/job/HBase-TRUNK-on-Hadoop-2.0.0/ws/trunk/pom.xml)>
has 2 errors
[ERROR]     'dependencyManagement.dependencies.dependency.artifactId' for org.apache.hbase:${compat.module}:jar
with value '${compat.module}' does not match a valid id pattern. @ line 997, column 21
[ERROR]     'dependencyManagement.dependencies.dependency.artifactId' for org.apache.hbase:${compat.module}:test-jar
with value '${compat.module}' does not match a valid id pattern. @ line 1002, column 21
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following
articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/ProjectBuildingException
Build step 'Invoke top-level Maven targets' marked build as failure
Performing Post build task...
Match found for :.* : True
Logical operation result is TRUE
Running script  :   ZOMBIE_TESTS_COUNT=`jps | grep surefirebooter | wc -l`
  if [[ $ZOMBIE_TESTS_COUNT != 0 ]] ; then
    #It seems sometimes the tests are not dying immediately. Let's give them 10s
    echo "Suspicious java process found - waiting 10s to see if there are just slow to stop"
    sleep 10
    ZOMBIE_TESTS_COUNT=`jps | grep surefirebooter | wc -l`
    if [[ $ZOMBIE_TESTS_COUNT != 0 ]] ; then
      echo "There are $ZOMBIE_TESTS_COUNT zombie tests, they should have been killed by surefire
but survived"
      echo "************ BEGIN zombies jstack extract"
      ZB_STACK=`jps | grep surefirebooter | cut -d ' ' -f 1 | xargs -n 1 jstack | grep ".test"
| grep "\.java"`
      jps | grep surefirebooter | cut -d ' ' -f 1 | xargs -n 1 jstack
      echo "************ END  zombies jstack extract"
      JIRA_COMMENT="$JIRA_COMMENT

     {color:red}-1 core zombie tests{color}.  There are ${ZOMBIE_TESTS_COUNT} zombie test(s):
${ZB_STACK}"
      BAD=1
      jps | grep surefirebooter | cut -d ' ' -f 1 | xargs kill -9
    else
      echo "We're ok: there is no zombie test, but some tests took some time to stop"
    fi
  else
    echo "We're ok: there is no zombie test"
  fi
[HBase-TRUNK-on-Hadoop-2.0.0] $ /bin/bash -xe /tmp/hudson8796399501763947191.sh
++ jps
++ wc -l
++ grep surefirebooter
+ ZOMBIE_TESTS_COUNT=6
+ [[ 6 != 0 ]]
+ echo 'Suspicious java process found - waiting 10s to see if there are just slow to stop'
Suspicious java process found - waiting 10s to see if there are just slow to stop
+ sleep 10
++ jps
++ grep surefirebooter
++ wc -l
+ ZOMBIE_TESTS_COUNT=1
+ [[ 1 != 0 ]]
+ echo 'There are 1 zombie tests, they should have been killed by surefire but survived'
There are 1 zombie tests, they should have been killed by surefire but survived
+ echo '************ BEGIN zombies jstack extract'
************ BEGIN zombies jstack extract
++ jps
++ grep surefirebooter
++ xargs -n 1 jstack
++ cut -d ' ' -f 1
++ grep .test
++ grep '\.java'
+ ZB_STACK='	at org.apache.mahout.math.stats.TDigestTest.testMerge(TDigestTest.java:409)'
+ jps
+ grep surefirebooter
+ cut -d ' ' -f 1
+ xargs -n 1 jstack
2013-12-06 09:19:10
Full thread dump Java HotSpot(TM) Server VM (20.45-b01 mixed mode):

"Attach Listener" daemon prio=10 tid=0xcde00800 nid=0x36eb waiting on condition [0x00000000]
   java.lang.Thread.State: RUNNABLE

"Low Memory Detector" daemon prio=10 tid=0xcdd07000 nid=0x26d3 runnable [0x00000000]
   java.lang.Thread.State: RUNNABLE

"C2 CompilerThread1" daemon prio=10 tid=0xcdd05400 nid=0x26d2 waiting on condition [0x00000000]
   java.lang.Thread.State: RUNNABLE

"C2 CompilerThread0" daemon prio=10 tid=0xcdd03400 nid=0x26d1 waiting on condition [0x00000000]
   java.lang.Thread.State: RUNNABLE

"Signal Dispatcher" daemon prio=10 tid=0xf68fac00 nid=0x26cf runnable [0x00000000]
   java.lang.Thread.State: RUNNABLE

"Finalizer" daemon prio=10 tid=0xf68ef000 nid=0x2696 in Object.wait() [0xcf27d000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <0xd38c10c0> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:118)
	- locked <0xd38c10c0> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:134)
	at java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:171)

"Reference Handler" daemon prio=10 tid=0xf68ed800 nid=0x2691 in Object.wait() [0xce2e4000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <0xd38c1078> (a java.lang.ref.Reference$Lock)
	at java.lang.Object.wait(Object.java:485)
	at java.lang.ref.Reference$ReferenceHandler.run(Reference.java:116)
	- locked <0xd38c1078> (a java.lang.ref.Reference$Lock)

"main" prio=10 tid=0xf6805400 nid=0x265b runnable [0xf6981000]
   java.lang.Thread.State: RUNNABLE
	at org.apache.mahout.math.stats.GroupTree$1.push(GroupTree.java:185)
	at org.apache.mahout.math.stats.GroupTree$1.<init>(GroupTree.java:172)
	at org.apache.mahout.math.stats.GroupTree.iterator(GroupTree.java:169)
	at org.apache.mahout.math.stats.GroupTree.access$300(GroupTree.java:14)
	at org.apache.mahout.math.stats.GroupTree$2.iterator(GroupTree.java:317)
	at org.apache.mahout.math.stats.TDigest.add(TDigest.java:120)
	at org.apache.mahout.math.stats.TDigest.add(TDigest.java:88)
	at org.apache.mahout.math.stats.TDigest.add(TDigest.java:76)
	at org.apache.mahout.math.stats.TDigestTest.testMerge(TDigestTest.java:422)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:47)
	at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
	at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:44)
	at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17)
	at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:26)
	at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:27)
	at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:271)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:70)
	at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
	at org.junit.runners.ParentRunner$3.run(ParentRunner.java:238)
	at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:63)
	at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:236)
	at org.junit.runners.ParentRunner.access$000(ParentRunner.java:53)
	at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:229)
	at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:26)
	at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:27)
	at org.junit.runners.ParentRunner.run(ParentRunner.java:309)
	at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:264)
	at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:153)
	at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:124)
	at org.apache.maven.surefire.booter.ForkedBooter.invokeProviderInSameClassLoader(ForkedBooter.java:200)
	at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:153)
	at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:103)

"VM Thread" prio=10 tid=0xf68e9c00 nid=0x267c runnable 

"GC task thread#0 (ParallelGC)" prio=10 tid=0xf680c800 nid=0x265c runnable 

"GC task thread#1 (ParallelGC)" prio=10 tid=0xf680e000 nid=0x265d runnable 

"GC task thread#2 (ParallelGC)" prio=10 tid=0xf680f800 nid=0x2660 runnable 

"GC task thread#3 (ParallelGC)" prio=10 tid=0xf6810c00 nid=0x2661 runnable 

"GC task thread#4 (ParallelGC)" prio=10 tid=0xf6812400 nid=0x2662 runnable 

"GC task thread#5 (ParallelGC)" prio=10 tid=0xf6813800 nid=0x2663 runnable 

"GC task thread#6 (ParallelGC)" prio=10 tid=0xf6815000 nid=0x2664 runnable 

"GC task thread#7 (ParallelGC)" prio=10 tid=0xf6816400 nid=0x2665 runnable 

"VM Periodic Task Thread" prio=10 tid=0xcdd08c00 nid=0x26df waiting on condition 

JNI global references: 1500

+ echo '************ END  zombies jstack extract'
************ END  zombies jstack extract
+ JIRA_COMMENT='

     {color:red}-1 core zombie tests{color}.  There are 1 zombie test(s): 	at org.apache.mahout.math.stats.TDigestTest.testMerge(TDigestTest.java:409)'
+ BAD=1
+ jps
+ grep surefirebooter
+ cut -d ' ' -f 1
+ xargs kill -9
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Archiving artifacts
Recording test results
Updating HBASE-9955
Updating HBASE-10073
Updating HBASE-9718
Updating HBASE-10079

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