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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: HBase-TRUNK-on-Hadoop-2.0.0 #797
Date Fri, 18 Oct 2013 04:27:59 GMT
See <https://builds.apache.org/job/HBase-TRUNK-on-Hadoop-2.0.0/797/changes>

Changes:

[enis] HBASE-9798 Include dependency hamcrest-core

[stack] HBASE-9796 npe in RegionServerCallable

[enis] HBASE-9755 Cannot run classes in hbase-server tests jar from command line

[enis] HBASE-9788 [WINDOWS] Update rest server class name

[larsh] HBASE-9747 PrefixFilter with OR condition gives wrong results (Aditya Kishore)

[jxiang] HBASE-9791 MR initializes scanner twice

[jeffreyz] HBASE-9776: Test Load And Verify Fails with TableNotEnabledException

[jyates] HBASE-9749: Custom threadpool for Coprocessor obtained HTables

[ramkrishna] HBASE-9689-Support using OperationAttributes through shell script (Ram)

------------------------------------------
[...truncated 4433 lines...]
      echo "We're ok: there is no zombie test, but some tests took some time to stop"
    fi
  else
    echo "We're ok: there is no zombie test"
  fi
[HBase-TRUNK-on-Hadoop-2.0.0] $ /bin/bash -xe /tmp/hudson6504400664712925356.sh
++ jps
++ grep surefirebooter
++ wc -l
+ ZOMBIE_TESTS_COUNT=2
+ [[ 2 != 0 ]]
+ echo 'Suspicious java process found - waiting 10s to see if there are just slow to stop'
Suspicious java process found - waiting 10s to see if there are just slow to stop
+ sleep 10
++ jps
++ grep surefirebooter
++ wc -l
+ ZOMBIE_TESTS_COUNT=1
+ [[ 1 != 0 ]]
+ echo 'There are 1 zombie tests, they should have been killed by surefire but survived'
There are 1 zombie tests, they should have been killed by surefire but survived
+ echo '************ BEGIN zombies jstack extract'
************ BEGIN zombies jstack extract
++ jps
++ grep surefirebooter
++ xargs -n 1 jstack
++ grep .test
++ cut -d ' ' -f 1
++ grep '\.java'
+ ZB_STACK='	at org.apache.openjpa.persistence.jdbc.TestLobs.testLobSetToNull(TestLobs.java:176)
	at org.apache.openjpa.persistence.test.AbstractPersistenceTestCase.runTest(AbstractPersistenceTestCase.java:579)
	at org.apache.openjpa.persistence.test.AbstractPersistenceTestCase.runBare(AbstractPersistenceTestCase.java:566)
	at org.apache.openjpa.persistence.test.AbstractPersistenceTestCase.runBare(AbstractPersistenceTestCase.java:542)
	at org.apache.openjpa.persistence.test.AbstractPersistenceTestCase.run(AbstractPersistenceTestCase.java:206)'
+ jps
+ grep surefirebooter
+ cut -d ' ' -f 1
+ xargs -n 1 jstack
2013-10-18 04:27:19
Full thread dump Java HotSpot(TM) Server VM (20.45-b01 mixed mode):

"derby.rawStoreDaemon" daemon prio=10 tid=0x8f932800 nid=0x10dc runnable [0x9287d000]
   java.lang.Thread.State: RUNNABLE
	at java.io.FileDescriptor.sync(Native Method)
	at org.apache.derby.impl.io.DirRandomAccessFile.sync(Unknown Source)
	at org.apache.derby.impl.store.raw.data.RAFContainer.writeRAFHeader(Unknown Source)
	at org.apache.derby.impl.store.raw.data.RAFContainer.clean(Unknown Source)
	- locked <0xb715cce0> (a org.apache.derby.impl.store.raw.data.RAFContainer4)
	at org.apache.derby.impl.services.cache.ConcurrentCache.cleanAndUnkeepEntry(Unknown Source)
	at org.apache.derby.impl.services.cache.ConcurrentCache.cleanEntry(Unknown Source)
	at org.apache.derby.impl.services.cache.BackgroundCleaner.performWork(Unknown Source)
	at org.apache.derby.impl.services.daemon.BasicDaemon.serviceClient(Unknown Source)
	at org.apache.derby.impl.services.daemon.BasicDaemon.work(Unknown Source)
	at org.apache.derby.impl.services.daemon.BasicDaemon.run(Unknown Source)
	at java.lang.Thread.run(Thread.java:662)

"Attach Listener" daemon prio=10 tid=0x90400800 nid=0x3d3e waiting on condition [0x00000000]
   java.lang.Thread.State: RUNNABLE

"Timer-0" daemon prio=10 tid=0x8f9fec00 nid=0x1267 in Object.wait() [0x92a75000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <0xb38ee378> (a java.util.TaskQueue)
	at java.lang.Object.wait(Object.java:485)
	at java.util.TimerThread.mainLoop(Timer.java:483)
	- locked <0xb38ee378> (a java.util.TaskQueue)
	at java.util.TimerThread.run(Timer.java:462)

"Low Memory Detector" daemon prio=10 tid=0x90ab9400 nid=0x123f runnable [0x00000000]
   java.lang.Thread.State: RUNNABLE

"C2 CompilerThread1" daemon prio=10 tid=0x90ab7800 nid=0x123e waiting on condition [0x00000000]
   java.lang.Thread.State: RUNNABLE

"C2 CompilerThread0" daemon prio=10 tid=0x90ab5800 nid=0x123d waiting on condition [0x00000000]
   java.lang.Thread.State: RUNNABLE

"Signal Dispatcher" daemon prio=10 tid=0x90ab4000 nid=0x123c runnable [0x00000000]
   java.lang.Thread.State: RUNNABLE

"Finalizer" daemon prio=10 tid=0x90aa6400 nid=0x123b in Object.wait() [0x93066000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <0xb367ce08> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:118)
	- locked <0xb367ce08> (a java.lang.ref.ReferenceQueue$Lock)
	at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:134)
	at java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:171)

"Reference Handler" daemon prio=10 tid=0x90aa4c00 nid=0x123a in Object.wait() [0x9097d000]
   java.lang.Thread.State: WAITING (on object monitor)
	at java.lang.Object.wait(Native Method)
	- waiting on <0xb367bce8> (a java.lang.ref.Reference$Lock)
	at java.lang.Object.wait(Object.java:485)
	at java.lang.ref.Reference$ReferenceHandler.run(Reference.java:116)
	- locked <0xb367bce8> (a java.lang.ref.Reference$Lock)

"main" prio=10 tid=0xf6705400 nid=0x1224 runnable [0xf6912000]
   java.lang.Thread.State: RUNNABLE
	at java.io.FileDescriptor.sync(Native Method)
	at org.apache.derby.impl.io.DirRandomAccessFile.sync(Unknown Source)
	at org.apache.derby.impl.store.raw.data.RAFContainer.writeRAFHeader(Unknown Source)
	at org.apache.derby.impl.store.raw.data.RAFContainer.run(Unknown Source)
	at java.security.AccessController.doPrivileged(Native Method)
	at org.apache.derby.impl.store.raw.data.RAFContainer.createContainer(Unknown Source)
	- locked <0xb7699478> (a org.apache.derby.impl.store.raw.data.RAFContainer4)
	at org.apache.derby.impl.store.raw.data.RAFContainer4.createContainer(Unknown Source)
	- locked <0xb7699478> (a org.apache.derby.impl.store.raw.data.RAFContainer4)
	at org.apache.derby.impl.store.raw.data.FileContainer.createIdent(Unknown Source)
	at org.apache.derby.impl.store.raw.data.FileContainer.createIdentity(Unknown Source)
	at org.apache.derby.impl.services.cache.ConcurrentCache.create(Unknown Source)
	at org.apache.derby.impl.store.raw.data.BaseDataFileFactory.addContainer(Unknown Source)
	at org.apache.derby.impl.store.raw.xact.Xact.addContainer(Unknown Source)
	at org.apache.derby.impl.store.access.btree.BTree.create(Unknown Source)
	at org.apache.derby.impl.store.access.btree.index.B2I.create(Unknown Source)
	at org.apache.derby.impl.store.access.btree.index.B2IFactory.createConglomerate(Unknown Source)
	at org.apache.derby.impl.store.access.RAMTransaction.createConglomerate(Unknown Source)
	at org.apache.derby.impl.store.access.RAMTransaction.recreateAndLoadConglomerate(Unknown
Source)
	at org.apache.derby.impl.store.access.RAMTransaction.createAndLoadConglomerate(Unknown Source)
	at org.apache.derby.impl.sql.execute.CreateIndexConstantAction.executeConstantAction(Unknown
Source)
	at org.apache.derby.impl.sql.execute.CreateConstraintConstantAction.executeConstantAction(Unknown
Source)
	at org.apache.derby.impl.sql.execute.CreateTableConstantAction.executeConstantAction(Unknown
Source)
	at org.apache.derby.impl.sql.execute.MiscResultSet.open(Unknown Source)
	at org.apache.derby.impl.sql.GenericPreparedStatement.executeStmt(Unknown Source)
	at org.apache.derby.impl.sql.GenericPreparedStatement.execute(Unknown Source)
	at org.apache.derby.impl.jdbc.EmbedStatement.executeStatement(Unknown Source)
	- locked <0xe9229120> (a org.apache.derby.impl.jdbc.EmbedConnection40)
	at org.apache.derby.impl.jdbc.EmbedStatement.execute(Unknown Source)
	- locked <0xe9229120> (a org.apache.derby.impl.jdbc.EmbedConnection40)
	at org.apache.derby.impl.jdbc.EmbedStatement.executeUpdate(Unknown Source)
	at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
	at org.apache.commons.dbcp.DelegatingStatement.executeUpdate(DelegatingStatement.java:228)
	at org.apache.openjpa.lib.jdbc.DelegatingStatement.executeUpdate(DelegatingStatement.java:118)
	at org.apache.openjpa.lib.jdbc.LoggingConnectionDecorator$LoggingConnection$LoggingStatement.executeUpdate(LoggingConnectionDecorator.java:912)
	at org.apache.openjpa.lib.jdbc.DelegatingStatement.executeUpdate(DelegatingStatement.java:118)
	at org.apache.openjpa.jdbc.schema.SchemaTool.executeSQL(SchemaTool.java:1224)
	at org.apache.openjpa.jdbc.schema.SchemaTool.createTable(SchemaTool.java:975)
	at org.apache.openjpa.jdbc.schema.SchemaTool.add(SchemaTool.java:551)
	at org.apache.openjpa.jdbc.schema.SchemaTool.add(SchemaTool.java:366)
	at org.apache.openjpa.jdbc.schema.SchemaTool.run(SchemaTool.java:343)
	at org.apache.openjpa.jdbc.meta.MappingTool.record(MappingTool.java:505)
	at org.apache.openjpa.jdbc.meta.MappingTool.record(MappingTool.java:455)
	at org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBrokerFactory.java:160)
	at org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.synchronizeMappings(JDBCBrokerFactory.java:164)
	at org.apache.openjpa.jdbc.kernel.JDBCBrokerFactory.newBrokerImpl(JDBCBrokerFactory.java:122)
	at org.apache.openjpa.kernel.AbstractBrokerFactory.newBroker(AbstractBrokerFactory.java:209)
	at org.apache.openjpa.kernel.DelegatingBrokerFactory.newBroker(DelegatingBrokerFactory.java:156)
	at org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(EntityManagerFactoryImpl.java:227)
	at org.apache.openjpa.persistence.EntityManagerFactoryImpl.createEntityManager(EntityManagerFactoryImpl.java:154)
	at org.apache.openjpa.persistence.jdbc.TestLobs.testLobEmptyString(TestLobs.java:193)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at junit.framework.TestCase.runTest(TestCase.java:154)
	at org.apache.openjpa.persistence.test.AbstractPersistenceTestCase.runTest(AbstractPersistenceTestCase.java:579)
	at junit.framework.TestCase.runBare(TestCase.java:127)
	at org.apache.openjpa.persistence.test.AbstractPersistenceTestCase.runBare(AbstractPersistenceTestCase.java:566)
	at org.apache.openjpa.persistence.test.AbstractPersistenceTestCase.runBare(AbstractPersistenceTestCase.java:542)
	at junit.framework.TestResult$1.protect(TestResult.java:106)
	at junit.framework.TestResult.runProtected(TestResult.java:124)
	at junit.framework.TestResult.run(TestResult.java:109)
	at junit.framework.TestCase.run(TestCase.java:118)
	at org.apache.openjpa.persistence.test.AbstractPersistenceTestCase.run(AbstractPersistenceTestCase.java:206)
	at junit.framework.TestSuite.runTest(TestSuite.java:208)
	at junit.framework.TestSuite.run(TestSuite.java:203)
	at sun.reflect.GeneratedMethodAccessor173.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.apache.maven.surefire.junit.JUnitTestSet.execute(JUnitTestSet.java:213)
	at org.apache.maven.surefire.suite.AbstractDirectoryTestSuite.executeTestSet(AbstractDirectoryTestSuite.java:115)
	at org.apache.maven.surefire.suite.AbstractDirectoryTestSuite.execute(AbstractDirectoryTestSuite.java:102)
	at org.apache.maven.surefire.Surefire.run(Surefire.java:180)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.apache.maven.surefire.booter.SurefireBooter.runSuitesInProcess(SurefireBooter.java:350)
	at org.apache.maven.surefire.booter.SurefireBooter.main(SurefireBooter.java:1021)

"VM Thread" prio=10 tid=0x90aa1000 nid=0x1239 runnable 

"GC task thread#0 (ParallelGC)" prio=10 tid=0xf670c800 nid=0x1227 runnable 

"GC task thread#1 (ParallelGC)" prio=10 tid=0xf670e000 nid=0x1228 runnable 

"GC task thread#2 (ParallelGC)" prio=10 tid=0xf670f400 nid=0x1229 runnable 

"GC task thread#3 (ParallelGC)" prio=10 tid=0xf6710c00 nid=0x122a runnable 

"GC task thread#4 (ParallelGC)" prio=10 tid=0xf6712000 nid=0x122b runnable 

"GC task thread#5 (ParallelGC)" prio=10 tid=0xf6713800 nid=0x122c runnable 

"GC task thread#6 (ParallelGC)" prio=10 tid=0xf6714c00 nid=0x122d runnable 

"GC task thread#7 (ParallelGC)" prio=10 tid=0xf6716400 nid=0x122e runnable 

"GC task thread#8 (ParallelGC)" prio=10 tid=0xf6717800 nid=0x122f runnable 

"GC task thread#9 (ParallelGC)" prio=10 tid=0xf6719000 nid=0x1230 runnable 

"GC task thread#10 (ParallelGC)" prio=10 tid=0xf671a400 nid=0x1231 runnable 

"GC task thread#11 (ParallelGC)" prio=10 tid=0xf671bc00 nid=0x1232 runnable 

"GC task thread#12 (ParallelGC)" prio=10 tid=0xf671d000 nid=0x1233 runnable 

"GC task thread#13 (ParallelGC)" prio=10 tid=0xf671e800 nid=0x1234 runnable 

"GC task thread#14 (ParallelGC)" prio=10 tid=0xf671fc00 nid=0x1235 runnable 

"GC task thread#15 (ParallelGC)" prio=10 tid=0xf6721400 nid=0x1236 runnable 

"GC task thread#16 (ParallelGC)" prio=10 tid=0xf6722800 nid=0x1237 runnable 

"GC task thread#17 (ParallelGC)" prio=10 tid=0xf6724000 nid=0x1238 runnable 

"VM Periodic Task Thread" prio=10 tid=0x90ac3400 nid=0x1240 waiting on condition 

JNI global references: 1701

+ echo '************ END  zombies jstack extract'
************ END  zombies jstack extract
+ JIRA_COMMENT='

     {color:red}-1 core zombie tests{color}.  There are 1 zombie test(s): 	at org.apache.openjpa.persistence.jdbc.TestLobs.testLobSetToNull(TestLobs.java:176)
	at org.apache.openjpa.persistence.test.AbstractPersistenceTestCase.runTest(AbstractPersistenceTestCase.java:579)
	at org.apache.openjpa.persistence.test.AbstractPersistenceTestCase.runBare(AbstractPersistenceTestCase.java:566)
	at org.apache.openjpa.persistence.test.AbstractPersistenceTestCase.runBare(AbstractPersistenceTestCase.java:542)
	at org.apache.openjpa.persistence.test.AbstractPersistenceTestCase.run(AbstractPersistenceTestCase.java:206)'
+ BAD=1
+ jps
+ grep surefirebooter
+ cut -d ' ' -f 1
+ xargs kill -9
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Archiving artifacts
Recording test results
Updating HBASE-9791
Updating HBASE-9755
Updating HBASE-9747
Updating HBASE-9796
Updating HBASE-9749
Updating HBASE-9788
Updating HBASE-9798
Updating HBASE-9689
Updating HBASE-9776

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