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From Christopher Thomas <christophermauricetho...@gmail.com>
Subject Re: Problems building hadoop 2.2.0 from source
Date Fri, 07 Feb 2014 05:25:13 GMT
I guess the ERROR lines in

hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-
jobclient/target/surefire-reports/org.apache.hadoop.mapreduce.v2.
TestMRJobsWithHistoryService-output.txt

led me to believe that the problem was with TestMRJobsWithHistoryService.
If that's not the case then what do these messages indicate?

As I say I am a complete novice and the learning curve is very steep.


On 7 February 2014 14:47, Ted Yu <yuzhihong@gmail.com> wrote:

> I checked out source code from
> http://svn.apache.org/repos/asf/hadoop/common/branches/branch-2.3 and it
> builds.
>
> From TestMRJobsWithHistoryService.txt, the test passed.
> What led to this test being singled out among the 454 tests ?
>
> Thanks
>
>
> On Thu, Feb 6, 2014 at 7:26 PM, Christopher Thomas <
> christophermauricethomas@gmail.com> wrote:
>
>> Yes well I tried 2.3, but I have found a number of problems building it.
>> I had to resort to manually applying patches that I found in the bug
>> tracking lists, which did not seem to have made it into all branches. So
>> for the moment I am sticking with 2.2.0 which is advertised as being
>> stable.
>>
>> I apologise for the confusion.
>>
>> Here is the contents
>> of ./hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-jobclient/target/surefire-reports/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService.txt,
>> though perhaps not that illuminating:
>>
>>
>>
>> -------------------------------------------------------------------------------
>> Test set: org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService
>>
>> -------------------------------------------------------------------------------
>> Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 52.669 sec
>>
>>
>>
>>
>> On 7 February 2014 14:12, Ted Yu <yuzhihong@gmail.com> wrote:
>>
>>> The output was
>>> from hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-jobclient/target/surefire-reports/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService-output.txt
>>>
>>>  Can you show us the contents
>>> of ./hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-jobclient/target/surefire-reports/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService.txt
>>> ?
>>>
>>> BTW hadoop 2.3 release candidate is coming up. You may consider paying
>>> more attention to hadoop 2.3
>>>
>>> Cheers
>>>
>>>
>>> On Thu, Feb 6, 2014 at 5:33 PM, Christopher Thomas <
>>> christophermauricethomas@gmail.com> wrote:
>>>
>>>> I included the last part of
>>>>
>>>> hadoop-mapreduce-project/hadoop-mapreduce-client/
>>>> hadoop-mapreduce-client-jobclient/target/surefire-
>>>> reports/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService.
>>>> txt
>>>>
>>>> in the second half of my initial posting, calling it "the output from TestMRJobsWithHistoryService".
>>>> Sloppy terminology I know, sorry if I wasn't very clear.
>>>>
>>>> Regards
>>>>
>>>> Chris
>>>>
>>>>
>>>> On 7 February 2014 11:53, Ted Yu <yuzhihong@gmail.com> wrote:
>>>>
>>>>> There isn't System.exit call in TestMRJobsWithHistoryService.java
>>>>>
>>>>> What
>>>>> did hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-jobclient/target/surefire-reports/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService.txt
>>>>> say ?
>>>>>
>>>>> Cheers
>>>>>
>>>>>
>>>>> On Thu, Feb 6, 2014 at 4:41 PM, Christopher Thomas <
>>>>> christophermauricethomas@gmail.com> wrote:
>>>>>
>>>>>> Hi,
>>>>>>
>>>>>> I am a complete beginner to Hadoop, trying to build 2.2.0 from source
>>>>>> on a Macbook Pro running OS X Mavericks.
>>>>>>
>>>>>> I am following the 'instructions' at
>>>>>> http://hadoop.apache.org/docs/current/hadoop-project-dist/hadoop-common/SingleCluster.html
such
>>>>>> as they are.
>>>>>>
>>>>>> I get the following test failure:
>>>>>>
>>>>>> Forking command line: /bin/sh -c cd
>>>>>> /Users/hadoop/hadoop-2.2.0-src/hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-jobclient
>>>>>> &&
>>>>>> /System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/bin/java
>>>>>> -Xmx1024m -XX:+HeapDumpOnOutOfMemoryError -jar
>>>>>> /Users/hadoop/hadoop-2.2.0-src/hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-jobclient/target/surefire/surefirebooter1837947962445626736.jar
>>>>>> /Users/hadoop/hadoop-2.2.0-src/hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-jobclient/target/surefire/surefire8537321961333093423tmp
>>>>>> /Users/hadoop/hadoop-2.2.0-src/hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-jobclient/target/surefire/surefire_1668661782666182940486tmp
>>>>>> Running org.apache.hadoop.mapreduce.v2.TestMROldApiJobs
>>>>>>
>>>>>> Results :
>>>>>>
>>>>>> Tests run: 454, Failures: 0, Errors: 0, Skipped: 11
>>>>>>
>>>>>> [INFO]
>>>>>> ------------------------------------------------------------------------
>>>>>> [INFO] Reactor Summary:
>>>>>> [INFO]
>>>>>> [INFO] hadoop-mapreduce-client-jobclient ................. FAILURE
>>>>>> [1:18:07.440s]
>>>>>> [INFO] hadoop-mapreduce-client-hs-plugins ................ SKIPPED
>>>>>> [INFO] Apache Hadoop MapReduce Examples .................. SKIPPED
>>>>>> [INFO] hadoop-mapreduce .................................. SKIPPED
>>>>>> [INFO]
>>>>>> ------------------------------------------------------------------------
>>>>>> [INFO] BUILD FAILURE
>>>>>> [INFO]
>>>>>> ------------------------------------------------------------------------
>>>>>> [INFO] Total time: 1:18:07.828s
>>>>>> [INFO] Finished at: Thu Feb 06 23:01:45 EST 2014
>>>>>> [INFO] Final Memory: 32M/94M
>>>>>> [INFO]
>>>>>> ------------------------------------------------------------------------
>>>>>> [ERROR] Failed to execute goal
>>>>>> org.apache.maven.plugins:maven-surefire-plugin:2.12.3:test (default-test)
>>>>>> on project hadoop-mapreduce-client-jobclient: ExecutionException;
nested
>>>>>> exception is java.util.concurrent.ExecutionException:
>>>>>> java.lang.RuntimeException: The forked VM terminated without saying
>>>>>> properly goodbye. VM crash or System.exit called ?
>>>>>>
>>>>>>
>>>>>> and the output from TestMRJobsWithHistoryService includes:
>>>>>>
>>>>>>
>>>>>> 2014-02-06 23:00:54,530 ERROR [Thread[Thread-252,5,main]]
>>>>>> delegation.AbstractDelegationTokenSecretManager
>>>>>> (AbstractDelegationTokenSecretManager.java:run(547)) - InterruptedExcpetion
>>>>>> recieved for ExpiredTokenRemover thread java.lang.InterruptedException:
>>>>>> sleep interrupted
>>>>>> 2014-02-06 23:00:54,531 INFO  [main] ipc.Server
>>>>>> (Server.java:stop(2437)) - Stopping server on 55131
>>>>>> 2014-02-06 23:00:54,540 INFO  [IPC Server listener on 55131]
>>>>>> ipc.Server (Server.java:run(720)) - Stopping IPC Server listener
on 55131
>>>>>> 2014-02-06 23:00:54,540 INFO  [IPC Server Responder] ipc.Server
>>>>>> (Server.java:run(866)) - Stopping IPC Server Responder
>>>>>> 2014-02-06 23:00:54,544 INFO  [main] mortbay.log
>>>>>> (Slf4jLog.java:info(67)) - Stopped
>>>>>> SelectChannelConnector@Christophers-MacBook-Pro.local:0
>>>>>> 2014-02-06 23:00:54,647 INFO  [main] hs.JobHistory
>>>>>> (JobHistory.java:serviceStop(136)) - Stopping JobHistory
>>>>>> 2014-02-06 23:00:54,647 INFO  [main] hs.JobHistory
>>>>>> (JobHistory.java:serviceStop(138)) - Stopping History Cleaner/Move
To Done
>>>>>> 2014-02-06 23:00:54,656 INFO  [main] mortbay.log
>>>>>> (Slf4jLog.java:info(67)) - Stopped
>>>>>> SelectChannelConnector@Christophers-MacBook-Pro.local:0
>>>>>> 2014-02-06 23:00:54,759 INFO  [main]
>>>>>> containermanager.ContainerManagerImpl
>>>>>> (ContainerManagerImpl.java:cleanUpApplicationsOnNMShutDown(328))
-
>>>>>> Applications still running : [application_1391688017341_0001]
>>>>>> 2014-02-06 23:00:54,762 INFO  [main]
>>>>>> containermanager.ContainerManagerImpl
>>>>>> (ContainerManagerImpl.java:cleanUpApplicationsOnNMShutDown(336))
- Waiting
>>>>>> for Applications to be Finished
>>>>>> 2014-02-06 23:00:54,762 INFO  [AsyncDispatcher event handler]
>>>>>> application.Application (ApplicationImpl.java:handle(451)) - Application
>>>>>> application_1391688017341_0001 transitioned from RUNNING to
>>>>>> APPLICATION_RESOURCES_CLEANINGUP
>>>>>> 2014-02-06 23:00:54,763 INFO  [DeletionService #3]
>>>>>> nodemanager.DefaultContainerExecutor
>>>>>> (DefaultContainerExecutor.java:deleteAsUser(368)) - Deleting absolute
path
>>>>>> :
>>>>>> /Users/hadoop/hadoop-2.2.0-src/hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-jobclient/target/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService-localDir-nm-0_0/usercache/root/appcache/application_1391688017341_0001
>>>>>> 2014-02-06 23:00:54,763 INFO  [DeletionService #0]
>>>>>> nodemanager.DefaultContainerExecutor
>>>>>> (DefaultContainerExecutor.java:deleteAsUser(368)) - Deleting absolute
path
>>>>>> :
>>>>>> /Users/hadoop/hadoop-2.2.0-src/hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-jobclient/target/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService-localDir-nm-0_1/usercache/root/appcache/application_1391688017341_0001
>>>>>> 2014-02-06 23:00:54,765 INFO  [AsyncDispatcher event handler]
>>>>>> containermanager.AuxServices (AuxServices.java:handle(175)) - Got
event
>>>>>> APPLICATION_STOP for appId application_1391688017341_0001
>>>>>> 2014-02-06 23:00:54,765 INFO  [DeletionService #1]
>>>>>> nodemanager.DefaultContainerExecutor
>>>>>> (DefaultContainerExecutor.java:deleteAsUser(368)) - Deleting absolute
path
>>>>>> :
>>>>>> /Users/hadoop/hadoop-2.2.0-src/hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-jobclient/target/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService-localDir-nm-0_2/usercache/root/appcache/application_1391688017341_0001
>>>>>> 2014-02-06 23:00:54,766 INFO  [AsyncDispatcher event handler]
>>>>>> application.Application (ApplicationImpl.java:handle(451)) - Application
>>>>>> application_1391688017341_0001 transitioned from
>>>>>> APPLICATION_RESOURCES_CLEANINGUP to FINISHED
>>>>>> 2014-02-06 23:00:54,767 INFO  [AsyncDispatcher event handler]
>>>>>> loghandler.NonAggregatingLogHandler
>>>>>> (NonAggregatingLogHandler.java:handle(118)) - Scheduling Log Deletion
for
>>>>>> application: application_1391688017341_0001, with delay of 10800
seconds
>>>>>> 2014-02-06 23:00:54,768 INFO  [DeletionService #3]
>>>>>> nodemanager.DefaultContainerExecutor
>>>>>> (DefaultContainerExecutor.java:deleteAsUser(368)) - Deleting absolute
path
>>>>>> :
>>>>>> /Users/hadoop/hadoop-2.2.0-src/hadoop-mapreduce-project/hadoop-mapreduce-client/hadoop-mapreduce-client-jobclient/target/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService/org.apache.hadoop.mapreduce.v2.TestMRJobsWithHistoryService-localDir-nm-0_3/usercache/root/appcache/application_1391688017341_0001
>>>>>> 2014-02-06 23:00:58,766 INFO  [main]
>>>>>> containermanager.ContainerManagerImpl
>>>>>> (ContainerManagerImpl.java:cleanUpApplicationsOnNMShutDown(353))
- Done
>>>>>> waiting for Applications to be Finished. Still alive:
>>>>>> [application_1391688017341_0001]
>>>>>> 2014-02-06 23:00:58,768 INFO  [main] ipc.Server
>>>>>> (Server.java:stop(2437)) - Stopping server on 55125
>>>>>> 2014-02-06 23:00:58,771 INFO  [IPC Server listener on 55125]
>>>>>> ipc.Server (Server.java:run(720)) - Stopping IPC Server listener
on 55125
>>>>>> 2014-02-06 23:00:58,772 INFO  [IPC Server Responder] ipc.Server
>>>>>> (Server.java:run(866)) - Stopping IPC Server Responder
>>>>>> 2014-02-06 23:01:08,774 INFO  [main] monitor.ContainersMonitorImpl
>>>>>> (ContainersMonitorImpl.java:isEnabled(159)) - ResourceCalculatorPlugin
is
>>>>>> unavailable on this system.
>>>>>> org.apache.hadoop.yarn.server.nodemanager.containermanager.monitor.ContainersMonitorImpl
>>>>>> is disabled.
>>>>>> 2014-02-06 23:01:08,784 INFO  [main] ipc.Server
>>>>>> (Server.java:stop(2437)) - Stopping server on 55126
>>>>>> 2014-02-06 23:01:08,785 INFO  [IPC Server listener on 55126]
>>>>>> ipc.Server (Server.java:run(720)) - Stopping IPC Server listener
on 55126
>>>>>> 2014-02-06 23:01:08,785 INFO  [IPC Server Responder] ipc.Server
>>>>>> (Server.java:run(866)) - Stopping IPC Server Responder
>>>>>> 2014-02-06 23:01:08,785 INFO  [Public Localizer]
>>>>>> localizer.ResourceLocalizationService
>>>>>> (ResourceLocalizationService.java:run(728)) - Public cache exiting
>>>>>> 2014-02-06 23:01:08,787 INFO  [main] mortbay.log
>>>>>> (Slf4jLog.java:info(67)) - Stopped
>>>>>> SelectChannelConnector@Christophers-MacBook-Pro.local:0
>>>>>> 2014-02-06 23:01:08,889 ERROR [Thread[Thread-17,5,main]]
>>>>>> delegation.AbstractDelegationTokenSecretManager
>>>>>> (AbstractDelegationTokenSecretManager.java:run(547)) - InterruptedExcpetion
>>>>>> recieved for ExpiredTokenRemover thread java.lang.InterruptedException:
>>>>>> sleep interrupted
>>>>>> 2014-02-06 23:01:08,891 INFO  [main] impl.MetricsSystemImpl
>>>>>> (MetricsSystemImpl.java:stop(200)) - Stopping JobHistoryServer metrics
>>>>>> system...
>>>>>> 2014-02-06 23:01:08,895 INFO  [main] impl.MetricsSystemImpl
>>>>>> (MetricsSystemImpl.java:stop(206)) - JobHistoryServer metrics system
>>>>>> stopped.
>>>>>> 2014-02-06 23:01:08,895 INFO  [main] impl.MetricsSystemImpl
>>>>>> (MetricsSystemImpl.java:shutdown(572)) - JobHistoryServer metrics
system
>>>>>> shutdown complete.
>>>>>> 2014-02-06 23:01:08,896 WARN  [ApplicationMaster Launcher]
>>>>>> amlauncher.ApplicationMasterLauncher
>>>>>> (ApplicationMasterLauncher.java:run(98)) -
>>>>>> org.apache.hadoop.yarn.server.resourcemanager.amlauncher.ApplicationMasterLauncher$LauncherThread
>>>>>> interrupted. Returning.
>>>>>> 2014-02-06 23:01:08,897 INFO  [main] ipc.Server
>>>>>> (Server.java:stop(2437)) - Stopping server on 55122
>>>>>> 2014-02-06 23:01:08,898 INFO  [IPC Server listener on 55122]
>>>>>> ipc.Server (Server.java:run(720)) - Stopping IPC Server listener
on 55122
>>>>>> 2014-02-06 23:01:08,898 INFO  [main] ipc.Server
>>>>>> (Server.java:stop(2437)) - Stopping server on 55121
>>>>>> 2014-02-06 23:01:08,898 INFO  [IPC Server Responder] ipc.Server
>>>>>> (Server.java:run(866)) - Stopping IPC Server Responder
>>>>>> 2014-02-06 23:01:08,902 INFO  [IPC Server listener on 55121]
>>>>>> ipc.Server (Server.java:run(720)) - Stopping IPC Server listener
on 55121
>>>>>> 2014-02-06 23:01:08,908 INFO  [IPC Server Responder] ipc.Server
>>>>>> (Server.java:run(866)) - Stopping IPC Server Responder
>>>>>> 2014-02-06 23:01:08,902 INFO  [main] ipc.Server
>>>>>> (Server.java:stop(2437)) - Stopping server on 55120
>>>>>> 2014-02-06 23:01:08,912 INFO  [IPC Server listener on 55120]
>>>>>> ipc.Server (Server.java:run(720)) - Stopping IPC Server listener
on 55120
>>>>>> 2014-02-06 23:01:08,912 INFO  [IPC Server Responder] ipc.Server
>>>>>> (Server.java:run(866)) - Stopping IPC Server Responder
>>>>>> 2014-02-06 23:01:08,912 INFO  [main] ipc.Server
>>>>>> (Server.java:stop(2437)) - Stopping server on 55119
>>>>>> 2014-02-06 23:01:08,917 INFO  [IPC Server listener on 55119]
>>>>>> ipc.Server (Server.java:run(720)) - Stopping IPC Server listener
on 55119
>>>>>> 2014-02-06 23:01:08,917 INFO  [Ping Checker]
>>>>>> util.AbstractLivelinessMonitor (AbstractLivelinessMonitor.java:run(127))
-
>>>>>> NMLivelinessMonitor thread interrupted
>>>>>> 2014-02-06 23:01:08,917 ERROR [ResourceManager Event Processor]
>>>>>> resourcemanager.ResourceManager (ResourceManager.java:run(435)) -
>>>>>> Returning, interrupted : java.lang.InterruptedException
>>>>>> 2014-02-06 23:01:08,917 INFO  [IPC Server Responder] ipc.Server
>>>>>> (Server.java:run(866)) - Stopping IPC Server Responder
>>>>>> 2014-02-06 23:01:08,918 INFO  [Ping Checker]
>>>>>> util.AbstractLivelinessMonitor (AbstractLivelinessMonitor.java:run(127))
-
>>>>>> AMLivelinessMonitor thread interrupted
>>>>>> 2014-02-06 23:01:08,918 INFO  [Ping Checker]
>>>>>> util.AbstractLivelinessMonitor (AbstractLivelinessMonitor.java:run(127))
-
>>>>>> org.apache.hadoop.yarn.server.resourcemanager.rmcontainer.ContainerAllocationExpirer
>>>>>> thread interrupted
>>>>>> 2014-02-06 23:01:08,918 INFO  [Ping Checker]
>>>>>> util.AbstractLivelinessMonitor (AbstractLivelinessMonitor.java:run(127))
-
>>>>>> AMLivelinessMonitor thread interrupted
>>>>>>
>>>>>> Has anyone seen this error before when building hadoop, and does
>>>>>> anyone have any ideas?
>>>>>>
>>>>>> Regards
>>>>>>
>>>>>> Chris
>>>>>>
>>>>>
>>>>>
>>>>
>>>
>>
>

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