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From divye sheth <divs.sh...@gmail.com>
Subject Re: GC overhead limit exceeded
Date Wed, 12 Mar 2014 06:20:52 GMT
Hi Haihong,

Please check out the link below, I believe it should solve your problem.

http://stackoverflow.com/questions/21005643/container-is-running-beyond-memory-limits

Thanks
Divye Sheth


On Wed, Mar 12, 2014 at 11:33 AM, haihong lu <ung3210@gmail.com> wrote:

> Thanks, even if i had added this parameter, but had no effect.
>
>
> On Tue, Mar 11, 2014 at 12:11 PM, unmesha sreeveni <unmeshabiju@gmail.com>wrote:
>
>> Try to increase the memory for datanode and see.This need to restart
>> hadoop
>> export HADOOP_DATANODE_OPTS="-Xmx10g"
>> This will set the heap to 10gb
>> You can also add this in start of hadoop-env.sh file
>>
>>
>> On Tue, Mar 11, 2014 at 9:02 AM, haihong lu <ung3210@gmail.com> wrote:
>>
>>> i have tried both of the methods you side, but the problem still exists.
>>> Thanks all the same. by the way, my hadoop version is 2.2.0, so the
>>> parameter  "mapreduce.map.memory.mb =3072" added to mapred-site.xml
>>> maybe has no effect. I have looked for this parameter in the document of
>>> hadoop, but did not found it.
>>>
>>>
>>> On Fri, Mar 7, 2014 at 4:57 PM, shashwat shriparv <
>>> dwivedishashwat@gmail.com> wrote:
>>>
>>>> Check this out
>>>>
>>>>
>>>> http://ask.gopivotal.com/hc/en-us/articles/201850408-Namenode-fails-with-java-lang-OutOfMemoryError-GC-overhead-limit-exceeded
>>>>
>>>>
>>>>
>>>> * Warm Regards_**∞_*
>>>> * Shashwat Shriparv*
>>>>  [image: http://www.linkedin.com/pub/shashwat-shriparv/19/214/2a9]<http://www.linkedin.com/pub/shashwat-shriparv/19/214/2a9>[image:
>>>> https://twitter.com/shriparv] <https://twitter.com/shriparv>[image:
>>>> https://www.facebook.com/shriparv] <https://www.facebook.com/shriparv>[image:
>>>> http://google.com/+ShashwatShriparv]<http://google.com/+ShashwatShriparv>[image:
>>>> http://www.youtube.com/user/sShriparv/videos]<http://www.youtube.com/user/sShriparv/videos>[image:
>>>> http://profile.yahoo.com/SWXSTW3DVSDTF2HHSRM47AV6DI/]<shriparv@yahoo.com>
>>>>
>>>>
>>>>
>>>> On Fri, Mar 7, 2014 at 12:04 PM, haihong lu <ung3210@gmail.com> wrote:
>>>>
>>>>> Hi:
>>>>>
>>>>>      i have a problem when run Hibench with hadoop-2.2.0, the wrong
>>>>> message list as below
>>>>>
>>>>> 14/03/07 13:54:53 INFO mapreduce.Job:  map 19% reduce 0%
>>>>>  14/03/07 13:54:54 INFO mapreduce.Job:  map 21% reduce 0%
>>>>> 14/03/07 14:00:26 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000020_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:00:27 INFO mapreduce.Job:  map 20% reduce 0%
>>>>> 14/03/07 14:00:40 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000008_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:00:41 INFO mapreduce.Job:  map 19% reduce 0%
>>>>> 14/03/07 14:00:59 INFO mapreduce.Job:  map 20% reduce 0%
>>>>> 14/03/07 14:00:59 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000015_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:01:00 INFO mapreduce.Job:  map 19% reduce 0%
>>>>> 14/03/07 14:01:03 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000023_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:01:11 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000026_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:01:35 INFO mapreduce.Job:  map 20% reduce 0%
>>>>> 14/03/07 14:01:35 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000019_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:01:36 INFO mapreduce.Job:  map 19% reduce 0%
>>>>> 14/03/07 14:01:43 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000007_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:02:00 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000000_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:02:01 INFO mapreduce.Job:  map 18% reduce 0%
>>>>> 14/03/07 14:02:23 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000021_0, Status : FAILED
>>>>> Error: Java heap space
>>>>> 14/03/07 14:02:24 INFO mapreduce.Job:  map 17% reduce 0%
>>>>> 14/03/07 14:02:31 INFO mapreduce.Job:  map 18% reduce 0%
>>>>> 14/03/07 14:02:33 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000029_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:02:34 INFO mapreduce.Job:  map 17% reduce 0%
>>>>> 14/03/07 14:02:38 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000010_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:02:41 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000018_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:02:43 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000014_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:02:47 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000028_0, Status : FAILED
>>>>> Error: Java heap space
>>>>> 14/03/07 14:02:50 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000002_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:02:51 INFO mapreduce.Job:  map 16% reduce 0%
>>>>> 14/03/07 14:02:51 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000005_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:02:52 INFO mapreduce.Job:  map 15% reduce 0%
>>>>> 14/03/07 14:02:55 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000006_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:02:57 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000027_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:02:58 INFO mapreduce.Job:  map 14% reduce 0%
>>>>> 14/03/07 14:03:04 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000009_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:03:05 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000017_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:03:05 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000022_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:03:06 INFO mapreduce.Job:  map 12% reduce 0%
>>>>> 14/03/07 14:03:10 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000001_0, Status : FAILED
>>>>> Error: GC overhead limit exceeded
>>>>> 14/03/07 14:03:11 INFO mapreduce.Job:  map 13% reduce 0%
>>>>> 14/03/07 14:03:11 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0010_m_000024_0, Status : FAILED
>>>>>
>>>>> and then i add a parameter "mapred.child.java.opts" to the file
>>>>> "mapred-site.xml",
>>>>>   <property>
>>>>>         <name>mapred.child.java.opts</name>
>>>>>         <value>-Xmx1024m</value>
>>>>>   </property>
>>>>> then another error occurs as below
>>>>>
>>>>> 14/03/07 11:21:51 INFO mapreduce.Job:  map 0% reduce 0%
>>>>> 14/03/07 11:21:59 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0003_m_000002_0, Status : FAILED
>>>>> Container
>>>>> [pid=5592,containerID=container_1394160253524_0003_01_000004] is running
>>>>> beyond virtual memory limits. Current usage: 112.6 MB of 1 GB physical
>>>>> memory used; 2.7 GB of
>>>>>
>>>>> 2.1 GB virtual memory used. Killing container.
>>>>> Dump of the process-tree for container_1394160253524_0003_01_000004 :
>>>>> |- PID PPID PGRPID SESSID CMD_NAME USER_MODE_TIME(MILLIS)
>>>>> SYSTEM_TIME(MILLIS) VMEM_USAGE(BYTES) RSSMEM_USAGE(PAGES) FULL_CMD_LINE
>>>>>  |- 5598 5592 5592 5592 (java) 563 14 2778632192 28520
>>>>> /usr/java/jdk1.7.0_45/bin/java -Djava.net.preferIPv4Stack=true
>>>>> -Dhadoop.metrics.log.level=WARN -Xmx2048m -
>>>>>
>>>>> Djava.io.tmpdir=/home/hadoop/tmp/nm-local-dir/usercache/hadoop/appcache/application_1394160253524_0003/container_1394160253524_0003_01_000004/tmp
>>>>> -
>>>>>
>>>>> Dlog4j.configuration=container-log4j.properties
>>>>> -Dyarn.app.container.log.dir=/var/log/hadoop/yarn/userlogs/application_1394160253524_0003/container_1394160253524_0003_01_000004
>>>>>
>>>>> -Dyarn.app.container.log.filesize=0 -Dhadoop.root.logger=INFO,CLA
>>>>> org.apache.hadoop.mapred.YarnChild 10.239.44.34 46837
>>>>> attempt_1394160253524_0003_m_000002_0 4
>>>>> |- 5592 4562 5592 5592 (bash) 0 0 108650496 300 /bin/bash -c
>>>>> /usr/java/jdk1.7.0_45/bin/java -Djava.net.preferIPv4Stack=true
>>>>> -Dhadoop.metrics.log.level=WARN  -Xmx2048m -
>>>>>
>>>>> Djava.io.tmpdir=/home/hadoop/tmp/nm-local-dir/usercache/hadoop/appcache/application_1394160253524_0003/container_1394160253524_0003_01_000004/tmp
>>>>> -
>>>>>
>>>>> Dlog4j.configuration=container-log4j.properties
>>>>> -Dyarn.app.container.log.dir=/var/log/hadoop/yarn/userlogs/application_1394160253524_0003/container_1394160253524_0003_01_000004
>>>>>
>>>>> -Dyarn.app.container.log.filesize=0 -Dhadoop.root.logger=INFO,CLA
>>>>> org.apache.hadoop.mapred.YarnChild 10.239.44.34 46837
>>>>> attempt_1394160253524_0003_m_000002_0 4
>>>>>
>>>>>
>>>>> 1>/var/log/hadoop/yarn/userlogs/application_1394160253524_0003/container_1394160253524_0003_01_000004/stdout
>>>>>
>>>>> 2>/var/log/hadoop/yarn/userlogs/application_1394160253524_0003/container_1394160253524_0003_01_000004/stderr
>>>>>
>>>>>
>>>>> Container killed on request. Exit code is 143
>>>>> 14/03/07 11:22:02 INFO mapreduce.Job: Task Id :
>>>>> attempt_1394160253524_0003_m_000001_0, Status : FAILED
>>>>> Container
>>>>> [pid=5182,containerID=container_1394160253524_0003_01_000003] is running
>>>>> beyond virtual memory limits. Current usage: 118.5 MB of 1 GB physical
>>>>> memory used; 2.7 GB of
>>>>>
>>>>> 2.1 GB virtual memory used. Killing container.
>>>>> Dump of the process-tree for container_1394160253524_0003_01_000003 :
>>>>> |- PID PPID PGRPID SESSID CMD_NAME USER_MODE_TIME(MILLIS)
>>>>> SYSTEM_TIME(MILLIS) VMEM_USAGE(BYTES) RSSMEM_USAGE(PAGES) FULL_CMD_LINE
>>>>>  |- 5182 4313 5182 5182 (bash) 0 0 108650496 303 /bin/bash -c
>>>>> /usr/java/jdk1.7.0_45/bin/java -Djava.net.preferIPv4Stack=true
>>>>> -Dhadoop.metrics.log.level=WARN  -Xmx2048m -
>>>>>
>>>>> Djava.io.tmpdir=/home/hadoop/tmp/nm-local-dir/usercache/hadoop/appcache/application_1394160253524_0003/container_1394160253524_0003_01_000003/tmp
>>>>> -
>>>>>
>>>>> Dlog4j.configuration=container-log4j.properties
>>>>> -Dyarn.app.container.log.dir=/var/log/hadoop/yarn/userlogs/application_1394160253524_0003/container_1394160253524_0003_01_000003
>>>>>
>>>>> -Dyarn.app.container.log.filesize=0 -Dhadoop.root.logger=INFO,CLA
>>>>> org.apache.hadoop.mapred.YarnChild 10.239.44.34 46837
>>>>> attempt_1394160253524_0003_m_000001_0 3
>>>>>
>>>>>
>>>>> 1>/var/log/hadoop/yarn/userlogs/application_1394160253524_0003/container_1394160253524_0003_01_000003/stdout
>>>>>
>>>>> 2>/var/log/hadoop/yarn/userlogs/application_1394160253524_0003/container_1394160253524_0003_01_000003/stderr
>>>>>
>>>>> |- 5187 5182 5182 5182 (java) 616 19 2783928320 30028
>>>>> /usr/java/jdk1.7.0_45/bin/java -Djava.net.preferIPv4Stack=true
>>>>> -Dhadoop.metrics.log.level=WARN -Xmx2048m -
>>>>>
>>>>> Djava.io.tmpdir=/home/hadoop/tmp/nm-local-dir/usercache/hadoop/appcache/application_1394160253524_0003/container_1394160253524_0003_01_000003/tmp
>>>>> -
>>>>>
>>>>> Dlog4j.configuration=container-log4j.properties
>>>>> -Dyarn.app.container.log.dir=/var/log/hadoop/yarn/userlogs/application_1394160253524_0003/container_1394160253524_0003_01_000003
>>>>>
>>>>> -Dyarn.app.container.log.filesize=0 -Dhadoop.root.logger=INFO,CLA
>>>>> org.apache.hadoop.mapred.YarnChild 10.239.44.34 46837
>>>>> attempt_1394160253524_0003_m_000001_0 3
>>>>>
>>>>> Container killed on request. Exit code is 143
>>>>>
>>>>> at last, the task failed.
>>>>> Thanks for any help!
>>>>>
>>>>
>>>>
>>>
>>
>>
>> --
>> *Thanks & Regards*
>>
>> Unmesha Sreeveni U.B
>> Junior Developer
>>
>> http://www.unmeshasreeveni.blogspot.in/
>>
>>
>>
>

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