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From java8964 java8964 <java8...@hotmail.com>
Subject RE: Confused about splitting
Date Sun, 10 Feb 2013 16:32:05 GMT

Hi, Chris:
Here is my understand about the file split and Data block.
The HDFS will store your file into multi data blocks, each block will be 64M or 128M depend
on your setting. Of course, the file could contain multi records. So the boundary of the record
won't match with the block boundary (in fact, most of them don't match).It is the responsibility
of RecorderReader to figure that out. The RecorderReader will be given byte[] of the file
split (or block) it should handle, and most likely the end of this block won't BE an end of
Record. So when the RecorderReader read the end of block, it will ALSO continue to the first
part of byte[] of next block, to build up a whole recorder of last one. Based on this contract,
the RecorderReader instance which handles the next block, will ignore the first part of byte[],
as they are just part of a previous recorder, and go straight to the starting point of next
The above logic is all based on assuming that the file is split-able. I did a project with
the log file could contain "embedded newline characters", so the TextInputFormat/LineRecorderReader
coming from Hadoop won't work in this case, and I have to write my own InputFormat/RecorderReader
to handle the above logic. To make File/InputFormat/RecorderReader support split-able is important
for performance, as the data can be processed concurrently block by block. But some file format,
especially compressing formats, like GZIP, do not support file split-able. In this case, each
file can ONLY be handle by one mapper. If you want to store your data into Gzip format, maybe
you want to control your file size, make it close to the block size.
For data stored in google protocol buffer, you probably have to write your own InputFormat/RecorderReader
to make it split-able. You can consider LZO format, as it is compressing and also support
split. You can search the elephant-bird, which is a framework from twitter to support google
protocol buffer and lzo data format, make your life easier.

Date: Sun, 10 Feb 2013 10:36:24 -0500
Subject: Confused about splitting
From: cpiggott@gmail.com
To: user@hadoop.apache.org

I'm a little confused about splitting and readers.
The data in my application is stored in files of google protocol buffers.  There are multiple
protocol buffers per file.  There have been a number of simple ways to put multiple protobufs
in a single file, usually involving writing some kind of length field before.  We did something
a little more complicated by defining a frame similar to HDLC: frames are enveloped by a flag,
escapes provided so the flag can't occur within the frame; and there is a 32-bit CRC-like
checksum just before the closing flag.

The protobufs are all a type named RitRecord, and we have our own reader that's something
like this:
   public interface RitRecordReader {      RitRecord getNext();

The data collection appication stores these things in ordinary flat files (the whole thing
is run through a GzipOutputFilter first, so the files are compressed).  I'm having trouble
understanding how to best apply this to HDFS for map function consumption.  Our data collector
writes 1 megabyte files, but I can combine them for map/reduce performance.  To avoid TOO
much wasted space I was thinking about 16, 32, or 64 MB HDFS blocks (tbd).

What I don't get is this: suppose we have a long file that spans multiple HDFS blocks.  I
think I end up with problems similar to this guy:

where one of my RitRecord objects is half in one HDFS block and half in another HDFS block.
 If the mapper is assigning tasks to nodes along HDFS blocks then I'm going to end up with
a problem.  It's not yet clear to me how to solve this.  I could make the problem LESS likely
with bigger blocks (like the default 128MB) but even then, the problem doesn't completely
go away (for me, a >128MB file is unlikely but not impossible).

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