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From "Sean Chow (Jira)" <j...@apache.org>
Subject [jira] [Updated] (HDFS-14476) lock too long when fix inconsistent blocks between disk and in-memory
Date Mon, 13 Apr 2020 04:28:00 GMT

     [ https://issues.apache.org/jira/browse/HDFS-14476?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel

Sean Chow updated HDFS-14476:
    Fix Version/s: 2.10.1

> lock too long when fix inconsistent blocks between disk and in-memory
> ---------------------------------------------------------------------
>                 Key: HDFS-14476
>                 URL: https://issues.apache.org/jira/browse/HDFS-14476
>             Project: Hadoop HDFS
>          Issue Type: Improvement
>          Components: datanode
>    Affects Versions: 2.6.0, 2.7.0, 3.0.3
>            Reporter: Sean Chow
>            Assignee: Sean Chow
>            Priority: Major
>             Fix For: 3.3.0, 2.10.1
>         Attachments: HDFS-14476-branch-2.01.patch, HDFS-14476-branch-2.02.patch, HDFS-14476-branch-2.10.02.patch,
HDFS-14476.00.patch, HDFS-14476.002.patch, HDFS-14476.01.patch, HDFS-14476.branch-3.2.001.patch,
> When directoryScanner have the results of differences between disk and in-memory blocks.
it will try to run {{checkAndUpdate}} to fix it. However {{FsDatasetImpl.checkAndUpdate}}
is a synchronized call
> As I have about 6millions blocks for every datanodes and every 6hours' scan will have
about 25000 abnormal blocks to fix. That leads to a long lock holding FsDatasetImpl object.
> let's assume every block need 10ms to fix(because of latency of SAS disk), that will
cost 250 seconds to finish. That means all reads and writes will be blocked for 3mins for
that datanode.
> {code:java}
> 2019-05-06 08:06:51,704 INFO org.apache.hadoop.hdfs.server.datanode.DirectoryScanner:
BlockPool BP-1644920766- Total blocks: 6850197, missing metadata
files:23574, missing block files:23574, missing blocks in memory:47625, mismatched blocks:0
> ...
> 2019-05-06 08:16:41,625 INFO org.apache.hadoop.hdfs.server.datanode.DataNode: Took 588402ms
to process 1 commands from NN
> {code}
> Take long time to process command from nn because threads are blocked. And namenode will
see long lastContact time for this datanode.
> Maybe this affect all hdfs versions.
> *how to fix:*
> just like process invalidate command from namenode with 1000 batch size, fix these abnormal
block should be handled with batch too and sleep 2 seconds between the batch to allow normal
reading/writing blocks.

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