hadoop-common-user mailing list archives

Site index · List index
Message view « Date » · « Thread »
Top « Date » · « Thread »
From "tim robertson" <timrobertson...@gmail.com>
Subject java.lang.OutOfMemoryError: Direct buffer memory
Date Tue, 25 Nov 2008 13:05:05 GMT
Hi all,

I am doing a very simple Map that determines an integer value to
assign to an input (1-64000).
The reduction does nothing, but I then use this output formatter to
put the data in a file per Key.

public class CellBasedOutputFormat extends
MultipleTextOutputFormat<WritableComparable, Writable> {
	@Override
	protected String generateFileNameForKeyValue(WritableComparable
key,Writable value, String name) {
		return "cell_" + key.toString();
	}
}

I get an out of memory error:
java.lang.OutOfMemoryError: Direct buffer memory
	at java.nio.Bits.reserveMemory(Bits.java:633)
	at java.nio.DirectByteBuffer.(DirectByteBuffer.java:95)
	at java.nio.ByteBuffer.allocateDirect(ByteBuffer.java:288)
	at org.apache.hadoop.io.compress.zlib.ZlibCompressor.(ZlibCompressor.java:198)
	at org.apache.hadoop.io.compress.zlib.ZlibCompressor.(ZlibCompressor.java:211)
	at org.apache.hadoop.io.compress.zlib.ZlibFactory.getZlibCompressor(ZlibFactory.java:83)
	at org.apache.hadoop.io.compress.DefaultCodec.createCompressor(DefaultCodec.java:59)
	at org.apache.hadoop.io.compress.DefaultCodec.createOutputStream(DefaultCodec.java:43)
	at org.apache.hadoop.mapred.TextOutputFormat.getRecordWriter(TextOutputFormat.java:131)
	at org.apache.hadoop.mapred.lib.MultipleTextOutputFormat.getBaseRecordWriter(MultipleTextOutputFormat.java:44)
	at org.apache.hadoop.mapred.lib.MultipleOutputFormat$1.write(MultipleOutputFormat.java:99)
	at org.apache.hadoop.mapred.ReduceTask$3.collect(ReduceTask.java:300)
	at org.apache.hadoop.mapred.lib.IdentityReducer.reduce(IdentityReducer.java:39)
	at org.apache.hadoop.mapred.ReduceTask.run(ReduceTask.java:318)
	at org.apache.hadoop.mapred.TaskTracker$Child.main(TaskTracker.java:2209)

I will keep this alive for about 24 hours but you can see the errors
here: http://ec2-67-202-42-36.compute-1.amazonaws.com:50030/jobtasks.jsp?jobid=job_200811250345_0001&type=reduce&pagenum=1

Please can you offer some advice?
Are my tuning parameters (Map tasks, Reduce tasks) perhaps wrong?

My configuration is:
		JobConf conf = new JobConf();
		conf.setJobName("OccurrenceByCellSplitter");
		conf.setNumMapTasks(10);
		conf.setNumReduceTasks(5);
		
		conf.setOutputKeyClass(Text.class);
		conf.setOutputValueClass(Text.class);
		conf.setMapperClass(OccurrenceBy1DegCellMapper.class);
		conf.setInputFormat(TextInputFormat.class);
		conf.setOutputFormat(CellBasedOutputFormat.class);
		
		FileInputFormat.setInputPaths(conf, inputFile);
		FileOutputFormat.setOutputPath(conf, outputDirectory);
		
		long time = System.currentTimeMillis();
		conf.setJarByClass(OccurrenceBy1DegCellMapper.class);
		JobClient.runJob(conf);


Many thanks for any advice,

Tim

Mime
View raw message