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From "Devaraj Das (JIRA)" <j...@apache.org>
Subject [jira] Commented: (HADOOP-3155) reducers stuck at shuffling
Date Fri, 10 Oct 2008 09:52:44 GMT

    [ https://issues.apache.org/jira/browse/HADOOP-3155?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12638517#action_12638517
] 

Devaraj Das commented on HADOOP-3155:
-------------------------------------

Maybe we should make this patch work for 0.18.3 as well. Thoughts? 
True that this problem might not show up with 0.19 due to the synchronization around fromEventId,
but it makes sense to join on the thread before starting a new one.

> reducers stuck at shuffling 
> ----------------------------
>
>                 Key: HADOOP-3155
>                 URL: https://issues.apache.org/jira/browse/HADOOP-3155
>             Project: Hadoop Core
>          Issue Type: Bug
>            Reporter: Runping Qi
>            Assignee: dhruba borthakur
>             Fix For: 0.19.0
>
>         Attachments: events-job_200807311630_0007.txt, fetcherThread.patch, fetcherThread.patch,
fetcherThread.patch, hadoop-3155-logs.tar.gz, jobevents_1007.txt, patch-3155-debug-0.16.txt,
patch-3155-debug-0.17.txt, task_200807311630_0007_r_000006_0.syslog.gz
>
>
> This happened with hadoop-0.16.2:
> In relatively small job (a few hundreds of mappers and reducers), reducers were stuck
at shuffling.
> I saw the lines like the following repeated hundreds of thousands of times over a few
hours:
> 2008-04-02 17:17:44,640 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:17:44,641 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:17:44,641 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:17:44,641 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:17:46,643 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:17:46,643 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:17:46,643 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:17:46,643 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:17:48,645 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:17:48,645 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:17:48,645 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:17:48,645 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:17:50,647 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:17:50,647 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:17:50,647 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:17:50,647 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:17:52,649 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:17:52,650 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:17:52,650 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:17:52,650 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:17:54,651 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:17:54,652 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:17:54,652 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:17:54,652 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:17:56,654 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:17:56,654 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:17:56,654 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:17:56,654 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:17:58,656 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:17:58,656 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:17:58,656 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:17:58,656 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:18:00,658 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:18:00,658 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:18:00,658 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:18:00,658 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:18:02,660 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:18:02,661 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:18:02,661 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:18:02,661 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:18:04,662 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:18:04,663 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:18:04,663 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:18:04,663 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:18:06,664 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:18:06,665 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:18:06,665 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:18:06,665 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:18:08,667 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:18:08,667 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:18:08,667 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:18:08,667 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:18:10,669 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:18:10,669 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:18:10,669 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:18:10,669 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:18:12,671 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:18:12,671 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:18:12,671 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:18:12,671 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:18:14,673 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:18:14,674 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:18:14,674 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:18:14,674 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:18:16,675 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:18:16,676 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:18:16,676 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:18:16,676 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:18:18,678 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:18:18,678 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:18:18,678 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:18:18,678 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:18:20,680 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:18:20,680 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:18:20,680 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...
> 2008-04-02 17:18:20,680 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Scheduled 0 of 0 known outputs (0 slow hosts and 0 dup hosts)
> 2008-04-02 17:18:22,682 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Need 2 map output(s)
> 2008-04-02 17:18:22,682 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0:
Got 0 new map-outputs & 0 obsolete map-outputs from tasktracker and 0 map-outputs from
previous failures
> 2008-04-02 17:18:22,682 INFO org.apache.hadoop.mapred.ReduceTask: task_200804021200_0337_r_000008_0
Got 0 known map output location(s); scheduling...

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