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From "Devaraj Das (JIRA)" <j...@apache.org>
Subject [jira] Updated: (HADOOP-1159) Reducers hang when map output file has a checksum error
Date Wed, 28 Mar 2007 16:31:25 GMT

     [ https://issues.apache.org/jira/browse/HADOOP-1159?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]

Devaraj Das updated HADOOP-1159:
--------------------------------

    Attachment: 1159.patch

Owen, this patch handles the server side exception as well (it doesn't have the client-side
exception handling that you do in your patch). Basically, changed the exception handling in
doGet method to also handle NPE. The body of the IOException and NPE handlers are common and
so moved to a separate method. 

> Reducers hang when map output file has a checksum error
> -------------------------------------------------------
>
>                 Key: HADOOP-1159
>                 URL: https://issues.apache.org/jira/browse/HADOOP-1159
>             Project: Hadoop
>          Issue Type: Bug
>          Components: mapred
>    Affects Versions: 0.12.2
>            Reporter: Nigel Daley
>         Assigned To: Owen O'Malley
>             Fix For: 0.12.3
>
>         Attachments: 1159.patch, h1159-2.patch, h1159.patch
>
>
> Two reduces hung in our sort benchmark. They always fail to get map outputs from node
X due to checksum error when the map outputs are read at that node resulting in a NullPointerException
on node X. This leads to constant failures on the two fetching reduces.
> 2007-03-26 00:02:57,082 WARN org.apache.hadoop.fs.FileSystem: Moving bad file /e/c/k/hqa/tb/tmp/mapred/local2/task_0002_m_022488_0/file.out
to /e/c/bad_files/file.out.542279301
> 2007-03-26 00:02:57,083 INFO org.apache.hadoop.fs.FSInputChecker: Found checksum error:
org.apache.hadoop.fs.ChecksumException: Checksum error: /e/c/k/hqa/tb/tmp/mapred/local2/task_0002_m_022488_0/file.out
at 106484224
> 	at org.apache.hadoop.fs.ChecksumFileSystem$FSInputChecker.verifySum(ChecksumFileSystem.java:254)
> 	at org.apache.hadoop.fs.ChecksumFileSystem$FSInputChecker.readBuffer(ChecksumFileSystem.java:211)
> 	at org.apache.hadoop.fs.ChecksumFileSystem$FSInputChecker.read(ChecksumFileSystem.java:167)
> 	at org.apache.hadoop.fs.FSDataInputStream$PositionCache.read(FSDataInputStream.java:41)
> 	at java.io.BufferedInputStream.fill(BufferedInputStream.java:218)
> 	at java.io.BufferedInputStream.read1(BufferedInputStream.java:258)
> 	at java.io.BufferedInputStream.read(BufferedInputStream.java:317)
> 	at java.io.DataInputStream.read(DataInputStream.java:132)
> 	at org.apache.hadoop.mapred.TaskTracker$MapOutputServlet.doGet(TaskTracker.java:1659)
> 	at javax.servlet.http.HttpServlet.service(HttpServlet.java:689)
> 	at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
> 	at org.mortbay.jetty.servlet.ServletHolder.handle(ServletHolder.java:427)
> 	at org.mortbay.jetty.servlet.WebApplicationHandler.dispatch(WebApplicationHandler.java:475)
> 	at org.mortbay.jetty.servlet.ServletHandler.handle(ServletHandler.java:567)
> 	at org.mortbay.http.HttpContext.handle(HttpContext.java:1565)
> 	at org.mortbay.jetty.servlet.WebApplicationContext.handle(WebApplicationContext.java:635)
> 	at org.mortbay.http.HttpContext.handle(HttpContext.java:1517)
> 	at org.mortbay.http.HttpServer.service(HttpServer.java:954)
> 	at org.mortbay.http.HttpConnection.service(HttpConnection.java:814)
> 	at org.mortbay.http.HttpConnection.handleNext(HttpConnection.java:981)
> 	at org.mortbay.http.HttpConnection.handle(HttpConnection.java:831)
> 	at org.mortbay.http.SocketListener.handleConnection(SocketListener.java:244)
> 	at org.mortbay.util.ThreadedServer.handle(ThreadedServer.java:357)
> 	at org.mortbay.util.ThreadPool$PoolThread.run(ThreadPool.java:534)
> 2007-03-26 00:02:57,083 WARN /: /mapOutput?map=task_0002_m_022488_0&reduce=1542:

> java.lang.NullPointerException

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