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From z..@apache.org
Subject [14/50] [abbrv] hadoop git commit: HDFS-8619. Erasure Coding: revisit replica counting for striped blocks. (Jing Zhao via yliu)
Date Thu, 20 Aug 2015 06:27:38 GMT
HDFS-8619. Erasure Coding: revisit replica counting for striped blocks. (Jing Zhao via yliu)


Project: http://git-wip-us.apache.org/repos/asf/hadoop/repo
Commit: http://git-wip-us.apache.org/repos/asf/hadoop/commit/f32d9a17
Tree: http://git-wip-us.apache.org/repos/asf/hadoop/tree/f32d9a17
Diff: http://git-wip-us.apache.org/repos/asf/hadoop/diff/f32d9a17

Branch: refs/heads/HDFS-7285-merge
Commit: f32d9a175837c5b6c3d008089e46475d27a0935c
Parents: 0a93712
Author: yliu <yliu@apache.org>
Authored: Wed Jul 15 22:35:19 2015 +0800
Committer: yliu <yliu@apache.org>
Committed: Wed Jul 15 22:35:19 2015 +0800

----------------------------------------------------------------------
 .../hadoop-hdfs/CHANGES-HDFS-EC-7285.txt        |  3 +
 .../hdfs/server/blockmanagement/BlockInfo.java  |  3 +
 .../blockmanagement/BlockInfoContiguous.java    |  5 ++
 .../blockmanagement/BlockInfoStriped.java       | 11 ++++
 .../server/blockmanagement/BlockManager.java    | 42 +++++++------
 .../hdfs/server/blockmanagement/BlocksMap.java  |  4 +-
 .../hdfs/TestReadStripedFileWithDecoding.java   | 64 ++++++++++++++++++++
 .../server/namenode/TestAddStripedBlocks.java   | 23 ++++---
 8 files changed, 127 insertions(+), 28 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/hadoop/blob/f32d9a17/hadoop-hdfs-project/hadoop-hdfs/CHANGES-HDFS-EC-7285.txt
----------------------------------------------------------------------
diff --git a/hadoop-hdfs-project/hadoop-hdfs/CHANGES-HDFS-EC-7285.txt b/hadoop-hdfs-project/hadoop-hdfs/CHANGES-HDFS-EC-7285.txt
index 93c3162..8403d1a 100755
--- a/hadoop-hdfs-project/hadoop-hdfs/CHANGES-HDFS-EC-7285.txt
+++ b/hadoop-hdfs-project/hadoop-hdfs/CHANGES-HDFS-EC-7285.txt
@@ -353,3 +353,6 @@
 
     HDFS-8734. Erasure Coding: fix one cell need two packets. (Walter Su via
     jing9)
+
+    HDFS-8619. Erasure Coding: revisit replica counting for striped blocks.
+    (Jing Zhao via yliu)

http://git-wip-us.apache.org/repos/asf/hadoop/blob/f32d9a17/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfo.java
----------------------------------------------------------------------
diff --git a/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfo.java
b/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfo.java
index 61068b9..82aa348 100644
--- a/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfo.java
+++ b/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfo.java
@@ -178,6 +178,9 @@ public abstract class BlockInfo extends Block
 
   public abstract boolean isStriped();
 
+  /** @return true if there is no datanode storage associated with the block */
+  abstract boolean hasNoStorage();
+
   /**
    * Find specified DatanodeDescriptor.
    * @return index or -1 if not found.

http://git-wip-us.apache.org/repos/asf/hadoop/blob/f32d9a17/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfoContiguous.java
----------------------------------------------------------------------
diff --git a/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfoContiguous.java
b/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfoContiguous.java
index 5199101..dfca8ea 100644
--- a/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfoContiguous.java
+++ b/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfoContiguous.java
@@ -150,4 +150,9 @@ public class BlockInfoContiguous extends BlockInfo {
   public final boolean isStriped() {
     return false;
   }
+
+  @Override
+  final boolean hasNoStorage() {
+    return getStorageInfo(0) == null;
+  }
 }

http://git-wip-us.apache.org/repos/asf/hadoop/blob/f32d9a17/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfoStriped.java
----------------------------------------------------------------------
diff --git a/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfoStriped.java
b/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfoStriped.java
index 07e29f8..6674510 100644
--- a/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfoStriped.java
+++ b/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockInfoStriped.java
@@ -272,4 +272,15 @@ public class BlockInfoStriped extends BlockInfo {
     }
     return ucBlock;
   }
+
+  @Override
+  final boolean hasNoStorage() {
+    final int len = getCapacity();
+    for(int idx = 0; idx < len; idx++) {
+      if (getStorageInfo(idx) != null) {
+        return false;
+      }
+    }
+    return true;
+  }
 }

http://git-wip-us.apache.org/repos/asf/hadoop/blob/f32d9a17/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockManager.java
----------------------------------------------------------------------
diff --git a/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockManager.java
b/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockManager.java
index 1aaf225..b641fa2 100644
--- a/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockManager.java
+++ b/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlockManager.java
@@ -1235,10 +1235,11 @@ public class BlockManager {
   }
 
   /**
-   * 
-   * @param b
+   * Mark a replica (of a contiguous block) or an internal block (of a striped
+   * block group) as corrupt.
+   * @param b Indicating the reported bad block and the corresponding BlockInfo
+   *          stored in blocksMap.
    * @param storageInfo storage that contains the block, if known. null otherwise.
-   * @throws IOException
    */
   private void markBlockAsCorrupt(BlockToMarkCorrupt b,
       DatanodeStorageInfo storageInfo,
@@ -1258,8 +1259,13 @@ public class BlockManager {
       storageInfo.addBlock(b.stored, b.corrupted);
     }
 
-    // Add this replica to corruptReplicas Map
-    corruptReplicas.addToCorruptReplicasMap(b.corrupted, node, b.reason,
+    // Add this replica to corruptReplicas Map. For striped blocks, we always
+    // use the id of whole striped block group when adding to corruptReplicas
+    Block corrupted = new Block(b.corrupted);
+    if (b.stored.isStriped()) {
+      corrupted.setBlockId(b.stored.getBlockId());
+    }
+    corruptReplicas.addToCorruptReplicasMap(corrupted, node, b.reason,
         b.reasonCode);
 
     NumberReplicas numberOfReplicas = countNodes(b.stored);
@@ -1283,7 +1289,7 @@ public class BlockManager {
     if (hasEnoughLiveReplicas || hasMoreCorruptReplicas
         || corruptedDuringWrite) {
       // the block is over-replicated so invalidate the replicas immediately
-      invalidateBlock(b, node);
+      invalidateBlock(b, node, numberOfReplicas);
     } else if (namesystem.isPopulatingReplQueues()) {
       // add the block to neededReplication
       updateNeededReplications(b.stored, -1, 0);
@@ -1295,8 +1301,8 @@ public class BlockManager {
    * @return true if the block was successfully invalidated and no longer
    * present in the BlocksMap
    */
-  private boolean invalidateBlock(BlockToMarkCorrupt b, DatanodeInfo dn
-      ) throws IOException {
+  private boolean invalidateBlock(BlockToMarkCorrupt b, DatanodeInfo dn,
+      NumberReplicas nr) throws IOException {
     blockLog.info("BLOCK* invalidateBlock: {} on {}", b, dn);
     DatanodeDescriptor node = getDatanodeManager().getDatanode(dn);
     if (node == null) {
@@ -1305,7 +1311,6 @@ public class BlockManager {
     }
 
     // Check how many copies we have of the block
-    NumberReplicas nr = countNodes(b.stored);
     if (nr.replicasOnStaleNodes() > 0) {
       blockLog.info("BLOCK* invalidateBlocks: postponing " +
           "invalidation of {} on {} because {} replica(s) are located on " +
@@ -1313,17 +1318,14 @@ public class BlockManager {
           nr.replicasOnStaleNodes());
       postponeBlock(b.corrupted);
       return false;
-    } else if (nr.liveReplicas() >= 1) {
-      // If we have at least one copy on a live node, then we can delete it.
+    } else {
+      // we already checked the number of replicas in the caller of this
+      // function and know there are enough live replicas, so we can delete it.
       addToInvalidates(b.corrupted, dn);
       removeStoredBlock(b.stored, node);
       blockLog.debug("BLOCK* invalidateBlocks: {} on {} listed for deletion.",
           b, dn);
       return true;
-    } else {
-      blockLog.info("BLOCK* invalidateBlocks: {} on {} is the only copy and" +
-          " was not deleted", b, dn);
-      return false;
     }
   }
 
@@ -2782,7 +2784,7 @@ public class BlockManager {
           " but corrupt replicas map has " + corruptReplicasCount);
     }
     if ((corruptReplicasCount > 0) && (numLiveReplicas >= fileReplication))
{
-      invalidateCorruptReplicas(storedBlock, reportedBlock);
+      invalidateCorruptReplicas(storedBlock, reportedBlock, num);
     }
     return storedBlock;
   }
@@ -2814,18 +2816,20 @@ public class BlockManager {
    *
    * @param blk Block whose corrupt replicas need to be invalidated
    */
-  private void invalidateCorruptReplicas(BlockInfo blk, Block reported) {
+  private void invalidateCorruptReplicas(BlockInfo blk, Block reported,
+      NumberReplicas numberReplicas) {
     Collection<DatanodeDescriptor> nodes = corruptReplicas.getNodes(blk);
     boolean removedFromBlocksMap = true;
     if (nodes == null)
       return;
     // make a copy of the array of nodes in order to avoid
     // ConcurrentModificationException, when the block is removed from the node
-    DatanodeDescriptor[] nodesCopy = nodes.toArray(new DatanodeDescriptor[0]);
+    DatanodeDescriptor[] nodesCopy =
+        nodes.toArray(new DatanodeDescriptor[nodes.size()]);
     for (DatanodeDescriptor node : nodesCopy) {
       try {
         if (!invalidateBlock(new BlockToMarkCorrupt(reported, blk, null,
-              Reason.ANY), node)) {
+            Reason.ANY), node, numberReplicas)) {
           removedFromBlocksMap = false;
         }
       } catch (IOException e) {

http://git-wip-us.apache.org/repos/asf/hadoop/blob/f32d9a17/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlocksMap.java
----------------------------------------------------------------------
diff --git a/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlocksMap.java
b/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlocksMap.java
index 9caf47c..9173920 100644
--- a/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlocksMap.java
+++ b/hadoop-hdfs-project/hadoop-hdfs/src/main/java/org/apache/hadoop/hdfs/server/blockmanagement/BlocksMap.java
@@ -201,8 +201,8 @@ class BlocksMap {
     // remove block from the data-node list and the node from the block info
     boolean removed = node.removeBlock(info);
 
-    if (info.getDatanode(0) == null     // no datanodes left
-              && info.isDeleted()) {  // does not belong to a file
+    if (info.hasNoStorage()    // no datanodes left
+        && info.isDeleted()) { // does not belong to a file
       blocks.remove(b);  // remove block from the map
     }
     return removed;

http://git-wip-us.apache.org/repos/asf/hadoop/blob/f32d9a17/hadoop-hdfs-project/hadoop-hdfs/src/test/java/org/apache/hadoop/hdfs/TestReadStripedFileWithDecoding.java
----------------------------------------------------------------------
diff --git a/hadoop-hdfs-project/hadoop-hdfs/src/test/java/org/apache/hadoop/hdfs/TestReadStripedFileWithDecoding.java
b/hadoop-hdfs-project/hadoop-hdfs/src/test/java/org/apache/hadoop/hdfs/TestReadStripedFileWithDecoding.java
index 3125e2e..34d6034 100644
--- a/hadoop-hdfs-project/hadoop-hdfs/src/test/java/org/apache/hadoop/hdfs/TestReadStripedFileWithDecoding.java
+++ b/hadoop-hdfs-project/hadoop-hdfs/src/test/java/org/apache/hadoop/hdfs/TestReadStripedFileWithDecoding.java
@@ -24,7 +24,11 @@ import org.apache.hadoop.fs.FSDataInputStream;
 import org.apache.hadoop.fs.Path;
 import org.apache.hadoop.hdfs.protocol.LocatedBlock;
 import org.apache.hadoop.hdfs.protocol.LocatedStripedBlock;
+import org.apache.hadoop.hdfs.server.blockmanagement.BlockInfo;
+import org.apache.hadoop.hdfs.server.blockmanagement.BlockManager;
 import org.apache.hadoop.hdfs.server.datanode.DataNode;
+import org.apache.hadoop.hdfs.server.datanode.DataNodeTestUtils;
+import org.apache.hadoop.hdfs.server.namenode.FSNamesystem;
 import org.apache.hadoop.hdfs.util.StripedBlockUtil;
 import org.junit.After;
 import org.junit.Assert;
@@ -234,4 +238,64 @@ public class TestReadStripedFileWithDecoding {
         fileSize, readLen);
     Assert.assertArrayEquals(bytes, result.array());
   }
+
+  /**
+   * After reading a corrupted block, make sure the client can correctly report
+   * the corruption to the NameNode.
+   */
+  @Test
+  public void testReportBadBlock() throws IOException {
+    // create file
+    final Path file = new Path("/corrupted");
+    final int length = 10; // length of "corruption"
+    final byte[] bytes = StripedFileTestUtil.generateBytes(length);
+    DFSTestUtil.writeFile(fs, file, bytes);
+
+    // corrupt the first data block
+    int dnIndex = findFirstDataNode(file, cellSize * dataBlocks);
+    Assert.assertNotEquals(-1, dnIndex);
+    LocatedStripedBlock slb = (LocatedStripedBlock)fs.getClient()
+        .getLocatedBlocks(file.toString(), 0, cellSize * dataBlocks).get(0);
+    final LocatedBlock[] blks = StripedBlockUtil.parseStripedBlockGroup(slb,
+        cellSize, dataBlocks, parityBlocks);
+    // find the first block file
+    File storageDir = cluster.getInstanceStorageDir(dnIndex, 0);
+    File blkFile = MiniDFSCluster.getBlockFile(storageDir, blks[0].getBlock());
+    Assert.assertTrue("Block file does not exist", blkFile.exists());
+    // corrupt the block file
+    LOG.info("Deliberately corrupting file " + blkFile.getName());
+    try (FileOutputStream out = new FileOutputStream(blkFile)) {
+      out.write("corruption".getBytes());
+    }
+
+    // disable the heartbeat from DN so that the corrupted block record is kept
+    // in NameNode
+    for (DataNode dn : cluster.getDataNodes()) {
+      DataNodeTestUtils.setHeartbeatsDisabledForTests(dn, true);
+    }
+
+    // do stateful read
+    ByteBuffer result = ByteBuffer.allocate(length);
+    ByteBuffer buf = ByteBuffer.allocate(1024);
+    int readLen = 0;
+    int ret;
+    try (FSDataInputStream in = fs.open(file)) {
+      while ((ret = in.read(buf)) >= 0) {
+        readLen += ret;
+        buf.flip();
+        result.put(buf);
+        buf.clear();
+      }
+    }
+    Assert.assertEquals("The length of file should be the same to write size",
+        length, readLen);
+    Assert.assertArrayEquals(bytes, result.array());
+
+    // check whether the corruption has been reported to the NameNode
+    final FSNamesystem ns = cluster.getNamesystem();
+    final BlockManager bm = ns.getBlockManager();
+    BlockInfo blockInfo = (ns.getFSDirectory().getINode4Write(file.toString())
+        .asFile().getBlocks())[0];
+    Assert.assertEquals(1, bm.getCorruptReplicas(blockInfo).size());
+  }
 }

http://git-wip-us.apache.org/repos/asf/hadoop/blob/f32d9a17/hadoop-hdfs-project/hadoop-hdfs/src/test/java/org/apache/hadoop/hdfs/server/namenode/TestAddStripedBlocks.java
----------------------------------------------------------------------
diff --git a/hadoop-hdfs-project/hadoop-hdfs/src/test/java/org/apache/hadoop/hdfs/server/namenode/TestAddStripedBlocks.java
b/hadoop-hdfs-project/hadoop-hdfs/src/test/java/org/apache/hadoop/hdfs/server/namenode/TestAddStripedBlocks.java
index 7876d1a..8128772 100644
--- a/hadoop-hdfs-project/hadoop-hdfs/src/test/java/org/apache/hadoop/hdfs/server/namenode/TestAddStripedBlocks.java
+++ b/hadoop-hdfs-project/hadoop-hdfs/src/test/java/org/apache/hadoop/hdfs/server/namenode/TestAddStripedBlocks.java
@@ -35,6 +35,7 @@ import org.apache.hadoop.hdfs.protocol.LocatedStripedBlock;
 import org.apache.hadoop.hdfs.server.blockmanagement.BlockInfo;
 import org.apache.hadoop.hdfs.server.blockmanagement.BlockInfoStriped;
 import org.apache.hadoop.hdfs.server.blockmanagement.BlockInfoStripedUnderConstruction;
+import org.apache.hadoop.hdfs.server.blockmanagement.BlockManager;
 import org.apache.hadoop.hdfs.server.blockmanagement.BlockManagerTestUtil;
 import org.apache.hadoop.hdfs.server.blockmanagement.DatanodeStorageInfo;
 import org.apache.hadoop.hdfs.server.common.HdfsServerConstants;
@@ -325,6 +326,7 @@ public class TestAddStripedBlocks {
     final int numStripes = 4;
     final Path filePath = new Path("/corrupt");
     final FSNamesystem ns = cluster.getNameNode().getNamesystem();
+    final BlockManager bm = ns.getBlockManager();
     DFSTestUtil.createStripedFile(cluster, filePath, null,
         numBlocks, numStripes, false);
 
@@ -375,7 +377,10 @@ public class TestAddStripedBlocks {
     ns.processIncrementalBlockReport(
         cluster.getDataNodes().get(3).getDatanodeId(), reports[0]);
     BlockManagerTestUtil.updateState(ns.getBlockManager());
-    Assert.assertEquals(2, ns.getCorruptReplicaBlocks());
+    // the total number of corrupted block info is still 1
+    Assert.assertEquals(1, ns.getCorruptReplicaBlocks());
+    // 2 internal blocks corrupted
+    Assert.assertEquals(2, bm.getCorruptReplicas(stored).size());
 
     // Now change the size of stored block, and test verifying the last
     // block size
@@ -385,9 +390,10 @@ public class TestAddStripedBlocks {
     reports = DFSTestUtil.makeReportForReceivedBlock(reported,
         ReceivedDeletedBlockInfo.BlockStatus.RECEIVED_BLOCK, storage);
     ns.processIncrementalBlockReport(
-        cluster.getDataNodes().get(3).getDatanodeId(), reports[0]);
+        cluster.getDataNodes().get(4).getDatanodeId(), reports[0]);
     BlockManagerTestUtil.updateState(ns.getBlockManager());
-    Assert.assertEquals(3, ns.getCorruptReplicaBlocks());
+    Assert.assertEquals(1, ns.getCorruptReplicaBlocks());
+    Assert.assertEquals(3, bm.getCorruptReplicas(stored).size());
 
     // Now send a parity block report with correct size based on adjusted
     // size of stored block
@@ -400,16 +406,18 @@ public class TestAddStripedBlocks {
     ns.processIncrementalBlockReport(
         cluster.getDataNodes().get(0).getDatanodeId(), reports[0]);
     BlockManagerTestUtil.updateState(ns.getBlockManager());
-    Assert.assertEquals(3, ns.getCorruptReplicaBlocks());
+    Assert.assertEquals(1, ns.getCorruptReplicaBlocks());
+    Assert.assertEquals(3, bm.getCorruptReplicas(stored).size());
 
     reported.setBlockId(stored.getBlockId() + 1);
     reported.setNumBytes(numStripes * BLOCK_STRIPED_CELL_SIZE + 10);
     reports = DFSTestUtil.makeReportForReceivedBlock(reported,
         ReceivedDeletedBlockInfo.BlockStatus.RECEIVED_BLOCK, storage);
     ns.processIncrementalBlockReport(
-        cluster.getDataNodes().get(1).getDatanodeId(), reports[0]);
+        cluster.getDataNodes().get(5).getDatanodeId(), reports[0]);
     BlockManagerTestUtil.updateState(ns.getBlockManager());
-    Assert.assertEquals(3, ns.getCorruptReplicaBlocks());
+    Assert.assertEquals(1, ns.getCorruptReplicaBlocks());
+    Assert.assertEquals(3, bm.getCorruptReplicas(stored).size());
 
     reported.setBlockId(stored.getBlockId() + NUM_DATA_BLOCKS);
     reported.setNumBytes((numStripes + 1) * BLOCK_STRIPED_CELL_SIZE);
@@ -418,7 +426,8 @@ public class TestAddStripedBlocks {
     ns.processIncrementalBlockReport(
         cluster.getDataNodes().get(2).getDatanodeId(), reports[0]);
     BlockManagerTestUtil.updateState(ns.getBlockManager());
-    Assert.assertEquals(3, ns.getCorruptReplicaBlocks());
+    Assert.assertEquals(1, ns.getCorruptReplicaBlocks());
+    Assert.assertEquals(3, bm.getCorruptReplicas(stored).size());
   }
 
 }


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