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From st...@apache.org
Subject svn commit: r607131 - in /lucene/hadoop/trunk/src/contrib/hbase: CHANGES.txt conf/hbase-default.xml src/java/org/apache/hadoop/hbase/HStore.java src/java/org/apache/hadoop/hbase/HStoreFile.java
Date Thu, 27 Dec 2007 22:26:28 GMT
Author: stack
Date: Thu Dec 27 14:26:27 2007
New Revision: 607131

URL: http://svn.apache.org/viewvc?rev=607131&view=rev
Log:
HADOOP-2485 Make mapfile index interval configurable

Modified:
    lucene/hadoop/trunk/src/contrib/hbase/CHANGES.txt
    lucene/hadoop/trunk/src/contrib/hbase/conf/hbase-default.xml
    lucene/hadoop/trunk/src/contrib/hbase/src/java/org/apache/hadoop/hbase/HStore.java
    lucene/hadoop/trunk/src/contrib/hbase/src/java/org/apache/hadoop/hbase/HStoreFile.java

Modified: lucene/hadoop/trunk/src/contrib/hbase/CHANGES.txt
URL: http://svn.apache.org/viewvc/lucene/hadoop/trunk/src/contrib/hbase/CHANGES.txt?rev=607131&r1=607130&r2=607131&view=diff
==============================================================================
--- lucene/hadoop/trunk/src/contrib/hbase/CHANGES.txt (original)
+++ lucene/hadoop/trunk/src/contrib/hbase/CHANGES.txt Thu Dec 27 14:26:27 2007
@@ -20,6 +20,8 @@
 
   OPTIMIZATIONS
    HADOOP-2479 Save on number of Text object creations
+   HADOOP-2485 Make mapfile index interval configurable (Set default to 32
+               instead of 128)
 
   BUG FIXES
    HADOOP-2059 In tests, exceptions in min dfs shutdown should not fail test

Modified: lucene/hadoop/trunk/src/contrib/hbase/conf/hbase-default.xml
URL: http://svn.apache.org/viewvc/lucene/hadoop/trunk/src/contrib/hbase/conf/hbase-default.xml?rev=607131&r1=607130&r2=607131&view=diff
==============================================================================
--- lucene/hadoop/trunk/src/contrib/hbase/conf/hbase-default.xml (original)
+++ lucene/hadoop/trunk/src/contrib/hbase/conf/hbase-default.xml Thu Dec 27 14:26:27 2007
@@ -201,6 +201,16 @@
     <description>How often a region server runs the split/compaction check.
     </description>
   </property>
+  <property>
+    <name>hbase.io.index.interval</name>
+    <value>32</value>
+    <description>The interval at which we record offsets in hbase
+    store files/mapfiles.  Default for stock mapfiles is 128.  Index
+    files are read into memory.  If there are many of them, could prove
+    a burden.  If so play with the hadoop io.map.index.skip property and
+    skip every nth index member when reading back the index into memory.
+    </description>
+  </property>
 
   <!-- HbaseShell Configurations -->
   <property>

Modified: lucene/hadoop/trunk/src/contrib/hbase/src/java/org/apache/hadoop/hbase/HStore.java
URL: http://svn.apache.org/viewvc/lucene/hadoop/trunk/src/contrib/hbase/src/java/org/apache/hadoop/hbase/HStore.java?rev=607131&r1=607130&r2=607131&view=diff
==============================================================================
--- lucene/hadoop/trunk/src/contrib/hbase/src/java/org/apache/hadoop/hbase/HStore.java (original)
+++ lucene/hadoop/trunk/src/contrib/hbase/src/java/org/apache/hadoop/hbase/HStore.java Thu
Dec 27 14:26:27 2007
@@ -937,11 +937,13 @@
       //
       // Related, looks like 'merging compactions' in BigTable paper interlaces
       // a memcache flush.  We don't.
+      int entries = 0;
       try {
         for (Map.Entry<HStoreKey, byte []> es: cache.entrySet()) {
           HStoreKey curkey = es.getKey();
           TextSequence f = HStoreKey.extractFamily(curkey.getColumn());
           if (f.equals(this.familyName)) {
+            entries++;
             out.append(curkey, new ImmutableBytesWritable(es.getValue()));
           }
         }
@@ -967,10 +969,10 @@
             flushedFile.getReader(this.fs, this.bloomFilter));
         this.storefiles.put(flushid, flushedFile);
         if(LOG.isDebugEnabled()) {
-          LOG.debug("Added " + name +
-              " with sequence id " + logCacheFlushId + " and size " +
-              StringUtils.humanReadableInt(flushedFile.length()) + " for " +
-              this.regionName + "/" + this.familyName);
+          LOG.debug("Added " + name + " with " + entries +
+            " entries, sequence id " + logCacheFlushId + ", and size " +
+            StringUtils.humanReadableInt(flushedFile.length()) + " for " +
+            this.regionName + "/" + this.familyName);
         }
       } finally {
         this.lock.writeLock().unlock();

Modified: lucene/hadoop/trunk/src/contrib/hbase/src/java/org/apache/hadoop/hbase/HStoreFile.java
URL: http://svn.apache.org/viewvc/lucene/hadoop/trunk/src/contrib/hbase/src/java/org/apache/hadoop/hbase/HStoreFile.java?rev=607131&r1=607130&r2=607131&view=diff
==============================================================================
--- lucene/hadoop/trunk/src/contrib/hbase/src/java/org/apache/hadoop/hbase/HStoreFile.java
(original)
+++ lucene/hadoop/trunk/src/contrib/hbase/src/java/org/apache/hadoop/hbase/HStoreFile.java
Thu Dec 27 14:26:27 2007
@@ -655,136 +655,37 @@
   }
   
   /**
-   * A facade for a {@link MapFile.Reader} that serves up either the top or
-   * bottom half of a MapFile (where 'bottom' is the first half of the file
-   * containing the keys that sort lowest and 'top' is the second half of the
-   * file with keys that sort greater than those of the bottom half).
-   * Subclasses BloomFilterMapFile.Reader in case 
-   * 
-   * <p>This file is not splitable.  Calls to {@link #midKey()} return null.
+   * Hbase customizations of MapFile.
    */
-  static class HalfMapFileReader extends BloomFilterMapFile.Reader {
-    private final boolean top;
-    private final WritableComparable midkey;
-    private boolean topFirstNextCall = true;
-    
-    HalfMapFileReader(final FileSystem fs, final String dirName, 
-        final Configuration conf, final Range r,
-        final WritableComparable midKey)
-    throws IOException {
-      this(fs, dirName, conf, r, midKey, null);
-    }
-    
-    HalfMapFileReader(final FileSystem fs, final String dirName, 
-        final Configuration conf, final Range r,
-        final WritableComparable midKey, final Filter filter)
-    throws IOException {
-      super(fs, dirName, conf, filter);
-      this.top = isTopFileRegion(r);
-      this.midkey = midKey;
-    }
-    
-    @SuppressWarnings("unchecked")
-    private void checkKey(final WritableComparable key)
-    throws IOException {
-      if (this.top) {
-        if (key.compareTo(this.midkey) < 0) {
-          throw new IOException("Illegal Access: Key is less than midKey of " +
-          "backing mapfile");
-        }
-      } else if (key.compareTo(this.midkey) >= 0) {
-        throw new IOException("Illegal Access: Key is greater than or equal " +
-        "to midKey of backing mapfile");
-      }
-    }
-
-    /** {@inheritDoc} */
-    @SuppressWarnings({ "unused"})
-    @Override
-    public synchronized void finalKey(WritableComparable key)
-    throws IOException {
-      throw new UnsupportedOperationException("Unsupported");
-    }
-
-    /** {@inheritDoc} */
-    @Override
-    public synchronized Writable get(WritableComparable key, Writable val)
-        throws IOException {
-      checkKey(key);
-      return super.get(key, val);
-    }
-
-    /** {@inheritDoc} */
-    @SuppressWarnings("unchecked")
-    @Override
-    public synchronized WritableComparable getClosest(WritableComparable key,
-        Writable val)
-    throws IOException {
-      if (this.top) {
-        if (key.compareTo(this.midkey) < 0) {
-          return this.midkey;
-        }
-      } else if (key.compareTo(this.midkey) >= 0) {
-        // Contract says return null if EOF.
-        return null;
-      }
-      return super.getClosest(key, val);
-    }
-
-    /** {@inheritDoc} */
-    @SuppressWarnings("unused")
-    @Override
-    public synchronized WritableComparable midKey() throws IOException {
-      // Returns null to indicate file is not splitable.
-      return null;
-    }
+  static class HbaseMapFile extends MapFile {
 
-    /** {@inheritDoc} */
-    @SuppressWarnings("unchecked")
-    @Override
-    public synchronized boolean next(WritableComparable key, Writable val)
-    throws IOException {
-      if (this.top && this.topFirstNextCall) {
-        this.topFirstNextCall = false;
-        return doFirstNextProcessing(key, val);
-      }
-      boolean result = super.next(key, val);
-      if (!top && key.compareTo(this.midkey) >= 0) {
-        result = false;
+    static class HbaseReader extends MapFile.Reader {
+      public HbaseReader(FileSystem fs, String dirName, Configuration conf)
+      throws IOException {
+        super(fs, dirName, conf);
+        // Force reading of the mapfile index by calling midKey.
+        // Reading the index will bring the index into memory over
+        // here on the client and then close the index file freeing
+        // up socket connection and resources in the datanode. 
+        // Usually, the first access on a MapFile.Reader will load the
+        // index force the issue in HStoreFile MapFiles because an
+        // access may not happen for some time; meantime we're
+        // using up datanode resources.  See HADOOP-2341.
+        midKey();
       }
-      return result;
     }
     
-    private boolean doFirstNextProcessing(WritableComparable key, Writable val)
-    throws IOException {
-      // Seek to midkey.  Midkey may not exist in this file.  That should be
-      // fine.  Then we'll either be positioned at end or start of file.
-      WritableComparable nearest = getClosest(this.midkey, val);
-      // Now copy the mid key into the passed key.
-      if (nearest != null) {
-        Writables.copyWritable(nearest, key);
-        return true;
-      }
-      return false;
-    }
-
-    /** {@inheritDoc} */
-    @Override
-    public synchronized void reset() throws IOException {
-      if (top) {
-        this.topFirstNextCall = true;
-        seek(this.midkey);
-        return;
+    static class HbaseWriter extends MapFile.Writer {
+      public HbaseWriter(Configuration conf, FileSystem fs, String dirName,
+          Class<Writable> keyClass, Class<Writable> valClass,
+          SequenceFile.CompressionType compression)
+      throws IOException {
+        super(conf, fs, dirName, keyClass, valClass, compression);
+        // Default for mapfiles is 128.  Makes random reads faster if we
+        // have more keys indexed and we're not 'next'-ing around in the
+        // mapfile.
+        setIndexInterval(conf.getInt("hbase.index.interval", 128));
       }
-      super.reset();
-    }
-
-    /** {@inheritDoc} */
-    @Override
-    public synchronized boolean seek(WritableComparable key)
-    throws IOException {
-      checkKey(key);
-      return super.seek(key);
     }
   }
   
@@ -793,40 +694,17 @@
    * tested first against bloom filter. Keys are HStoreKey.  If passed bloom
    * filter is null, just passes invocation to parent.
    */
-  static class BloomFilterMapFile extends MapFile {
-    protected BloomFilterMapFile() {
-      super();
-    }
-    
-    static class Reader extends MapFile.Reader {
+  static class BloomFilterMapFile extends HbaseMapFile {
+    static class Reader extends HbaseReader {
       private final Filter bloomFilter;
 
-      /**
-       * Constructor
-       * 
-       * @param fs
-       * @param dirName
-       * @param conf
-       * @param filter
-       * @throws IOException
-       */
       public Reader(FileSystem fs, String dirName, Configuration conf,
           final Filter filter)
       throws IOException {
         super(fs, dirName, conf);
         this.bloomFilter = filter;
-        // Force reading of the mapfile index by calling midKey.
-        // Reading the index will bring the index into memory over
-        // here on the client and then close the index file freeing
-        // up socket connection and resources in the datanode. 
-        // Usually, the first access on a MapFile.Reader will load the
-        // index force the issue in HStoreFile MapFiles because an
-        // access may not happen for some time; meantime we're
-        // using up datanode resources.  See HADOOP-2341.
-        midKey();
       }
       
-      /** {@inheritDoc} */
       @Override
       public Writable get(WritableComparable key, Writable val)
       throws IOException {
@@ -845,7 +723,6 @@
         return null;
       }
 
-      /** {@inheritDoc} */
       @Override
       public WritableComparable getClosest(WritableComparable key,
           Writable val)
@@ -867,21 +744,9 @@
       }
     }
     
-    static class Writer extends MapFile.Writer {
+    static class Writer extends HbaseWriter {
       private final Filter bloomFilter;
       
-      /**
-       * Constructor
-       * 
-       * @param conf
-       * @param fs
-       * @param dirName
-       * @param keyClass
-       * @param valClass
-       * @param compression
-       * @param filter
-       * @throws IOException
-       */
       @SuppressWarnings("unchecked")
       public Writer(Configuration conf, FileSystem fs, String dirName,
           Class keyClass, Class valClass,
@@ -890,8 +755,7 @@
         super(conf, fs, dirName, keyClass, valClass, compression);
         this.bloomFilter = filter;
       }
-
-      /** {@inheritDoc} */
+      
       @Override
       public void append(WritableComparable key, Writable val)
       throws IOException {
@@ -964,6 +828,140 @@
     return new BloomFilterMapFile.Writer(conf, fs,
       getMapFilePath().toString(), HStoreKey.class,
       ImmutableBytesWritable.class, compression, bloomFilter);
+  }
+
+  /**
+   * A facade for a {@link MapFile.Reader} that serves up either the top or
+   * bottom half of a MapFile (where 'bottom' is the first half of the file
+   * containing the keys that sort lowest and 'top' is the second half of the
+   * file with keys that sort greater than those of the bottom half).
+   * Subclasses BloomFilterMapFile.Reader in case 
+   * 
+   * <p>This file is not splitable.  Calls to {@link #midKey()} return null.
+   */
+  static class HalfMapFileReader extends BloomFilterMapFile.Reader {
+    private final boolean top;
+    private final WritableComparable midkey;
+    private boolean topFirstNextCall = true;
+    
+    HalfMapFileReader(final FileSystem fs, final String dirName, 
+        final Configuration conf, final Range r,
+        final WritableComparable midKey)
+    throws IOException {
+      this(fs, dirName, conf, r, midKey, null);
+    }
+    
+    HalfMapFileReader(final FileSystem fs, final String dirName, 
+        final Configuration conf, final Range r,
+        final WritableComparable midKey, final Filter filter)
+    throws IOException {
+      super(fs, dirName, conf, filter);
+      this.top = isTopFileRegion(r);
+      this.midkey = midKey;
+    }
+    
+    @SuppressWarnings("unchecked")
+    private void checkKey(final WritableComparable key)
+    throws IOException {
+      if (this.top) {
+        if (key.compareTo(this.midkey) < 0) {
+          throw new IOException("Illegal Access: Key is less than midKey of " +
+          "backing mapfile");
+        }
+      } else if (key.compareTo(this.midkey) >= 0) {
+        throw new IOException("Illegal Access: Key is greater than or equal " +
+        "to midKey of backing mapfile");
+      }
+    }
+
+    /** {@inheritDoc} */
+    @SuppressWarnings({ "unused"})
+    @Override
+    public synchronized void finalKey(WritableComparable key)
+    throws IOException {
+      throw new UnsupportedOperationException("Unsupported");
+    }
+
+    /** {@inheritDoc} */
+    @Override
+    public synchronized Writable get(WritableComparable key, Writable val)
+        throws IOException {
+      checkKey(key);
+      return super.get(key, val);
+    }
+
+    /** {@inheritDoc} */
+    @SuppressWarnings("unchecked")
+    @Override
+    public synchronized WritableComparable getClosest(WritableComparable key,
+        Writable val)
+    throws IOException {
+      if (this.top) {
+        if (key.compareTo(this.midkey) < 0) {
+          return this.midkey;
+        }
+      } else if (key.compareTo(this.midkey) >= 0) {
+        // Contract says return null if EOF.
+        return null;
+      }
+      return super.getClosest(key, val);
+    }
+
+    /** {@inheritDoc} */
+    @SuppressWarnings("unused")
+    @Override
+    public synchronized WritableComparable midKey() throws IOException {
+      // Returns null to indicate file is not splitable.
+      return null;
+    }
+
+    /** {@inheritDoc} */
+    @SuppressWarnings("unchecked")
+    @Override
+    public synchronized boolean next(WritableComparable key, Writable val)
+    throws IOException {
+      if (this.top && this.topFirstNextCall) {
+        this.topFirstNextCall = false;
+        return doFirstNextProcessing(key, val);
+      }
+      boolean result = super.next(key, val);
+      if (!top && key.compareTo(this.midkey) >= 0) {
+        result = false;
+      }
+      return result;
+    }
+    
+    private boolean doFirstNextProcessing(WritableComparable key, Writable val)
+    throws IOException {
+      // Seek to midkey.  Midkey may not exist in this file.  That should be
+      // fine.  Then we'll either be positioned at end or start of file.
+      WritableComparable nearest = getClosest(this.midkey, val);
+      // Now copy the mid key into the passed key.
+      if (nearest != null) {
+        Writables.copyWritable(nearest, key);
+        return true;
+      }
+      return false;
+    }
+
+    /** {@inheritDoc} */
+    @Override
+    public synchronized void reset() throws IOException {
+      if (top) {
+        this.topFirstNextCall = true;
+        seek(this.midkey);
+        return;
+      }
+      super.reset();
+    }
+
+    /** {@inheritDoc} */
+    @Override
+    public synchronized boolean seek(WritableComparable key)
+    throws IOException {
+      checkKey(key);
+      return super.seek(key);
+    }
   }
 
   /**



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