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From Alessandro Negro <alenegr...@yahoo.it>
Subject Re: Help with Giraph on Yarn
Date Thu, 06 Nov 2014 09:47:40 GMT
Hi Tripti,
yes I run in this way:


$HADOOP_INSTALL/bin/hadoop jar /Users/ale/extprj/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar
org.apache.giraph.GiraphRunner org.apache.giraph.examples.SimpleShortestPathsComputation -vif
org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat -vip /tiny_graph.txt
-vof org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op /shortestpaths -w 1 -yj
/Users/ale/extprj/giraph/giraph-core/target/giraph-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar,/Users/ale/extprj/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar

And this is the complete trace:

2014-11-06 10:06:05.638 java[7778:1903] Unable to load realm info from SCDynamicStore
14/11/06 10:06:05 WARN util.NativeCodeLoader: Unable to load native-hadoop library for your
platform... using builtin-java classes where applicable
14/11/06 10:06:06 INFO utils.ConfigurationUtils: No edge input format specified. Ensure your
InputFormat does not require one.
14/11/06 10:06:06 INFO utils.ConfigurationUtils: No edge output format specified. Ensure your
OutputFormat does not require one.
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Final output path is: hdfs://hadoop-master:9000/shortestpaths
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Running Client
14/11/06 10:06:06 INFO client.RMProxy: Connecting to ResourceManager at /0.0.0.0:8032
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Got node report from ASM for, nodeId=10.61.137.28:59677,
nodeAddress 10.61.137.28:8042, nodeRackName /default-rack, nodeNumContainers 0
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Defaulting per-task heap size to 1024MB.
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Obtained new Application ID: application_1415264041937_0005
14/11/06 10:06:06 INFO Configuration.deprecation: mapred.job.id is deprecated. Instead, use
mapreduce.job.id
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Set the environment for the application master
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Environment for AM :{CLASSPATH=${CLASSPATH}:./*:$HADOOP_CONF_DIR:$HADOOP_COMMON_HOME/share/hadoop/common/*:$HADOOP_COMMON_HOME/share/hadoop/common/lib/*:$HADOOP_HDFS_HOME/share/hadoop/hdfs/*:$HADOOP_HDFS_HOME/share/hadoop/hdfs/lib/*:$HADOOP_YARN_HOME/share/hadoop/yarn/*:$HADOOP_YARN_HOME/share/hadoop/yarn/lib/*:$HADOOP_MAPRED_HOME/share/hadoop/mapreduce/*:$HADOOP_MAPRED_HOME/share/hadoop/mapreduce/lib/*}
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: buildLocalResourceMap ....
14/11/06 10:06:06 INFO yarn.YarnUtils: Registered file in LocalResources :: hdfs://hadoop-master:9000/user/ale/giraph_yarn_jar_cache/application_1415264041937_0005/giraph-conf.xml
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: LIB JARS :/Users/ale/extprj/giraph/giraph-core/target/giraph-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar,/Users/ale/extprj/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name .
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking .
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name null
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking null
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/etc/hadoop
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/etc/hadoop
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/common/lib/*
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/common/lib
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/common/*
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/common
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs/lib/*
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs/lib
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs/*
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/yarn/lib/*
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/yarn/lib
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/yarn/*
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/yarn
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce/lib/*
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce/lib
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce/*
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name 
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/myLib/*.jar
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/myLib
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /Users/ale/extprj/giraph/myGiraph/*.jar
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /Users/ale/extprj/giraph/myGiraph
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /Users/ale/extprj/giraph/myGiraph/lib/*.jar
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /Users/ale/extprj/giraph/myGiraph/lib
14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /contrib/capacity-scheduler/*.jar
14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /contrib/capacity-scheduler
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: ApplicationSumbissionContext for GiraphApplicationMaster
launch container is populated.
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Submitting application to ASM
14/11/06 10:06:06 INFO impl.YarnClientImpl: Submitted application application_1415264041937_0005
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Got new appId after submission :application_1415264041937_0005
14/11/06 10:06:06 INFO yarn.GiraphYarnClient: GiraphApplicationMaster container request was
submitted to ResourceManager for job: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation
14/11/06 10:06:07 INFO yarn.GiraphYarnClient: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation,
Elapsed: 0,83 secs
14/11/06 10:06:07 INFO yarn.GiraphYarnClient: appattempt_1415264041937_0005_000001, State:
ACCEPTED, Containers used: 1
14/11/06 10:06:10 ERROR yarn.GiraphYarnClient: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation
reports FAILED state, diagnostics show: Application application_1415264041937_0005 failed
2 times due to AM Container for appattempt_1415264041937_0005_000002 exited with  exitCode:
1 due to: Exception from container-launch: ExitCodeException exitCode=1: 
ExitCodeException exitCode=1: 
	at org.apache.hadoop.util.Shell.runCommand(Shell.java:538)
	at org.apache.hadoop.util.Shell.run(Shell.java:455)
	at org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:702)
	at org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:195)
	at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:300)
	at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:81)
	at java.util.concurrent.FutureTask.run(FutureTask.java:262)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
	at java.lang.Thread.run(Thread.java:744)


Container exited with a non-zero exit code 1
.Failing this attempt.. Failing the application.
14/11/06 10:06:10 INFO yarn.GiraphYarnClient: Cleaning up HDFS distributed cache directory
for Giraph job.
14/11/06 10:06:10 INFO yarn.GiraphYarnClient: Completed Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation:
FAILED, total running time: 0 minutes, 3 seconds.
ale:~/extprj/giraph/myGiraph />yarn logs -applicationId application_1415264041937_0005

As you can see there is this piece:

14/11/06 10:06:06 INFO yarn.GiraphYarnClient: LIB JARS :/Users/ale/extprj/giraph/giraph-core/target/giraph-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar,/Users/ale/extprj/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar


But I continue to receive the error:

Thanks,
Alessandro


Il giorno 06/nov/2014, alle ore 10:25, Tripti Singh <tripti@yahoo-inc.com> ha scritto:

> For GiraphApplicationMaster not found, the simple thing that worked for me was adding
a -yj parameter to my command. 
> (hadoop jar {jar-file-path} {path to giraph runner} {computation-class} {bunch of parameters}
-yj {jar-file-name})
> If u look at job logs,
> Do u see a log statement defining "LIB JARS"?
> 
> Sent from my iPhone
> 
> On 06-Nov-2014, at 2:45 pm, "Alessandro Negro" <alenegro81@yahoo.it> wrote:
> 
>> Hi,
>> yea my logs shows that error. I follow this example:
>> 
>> http://mail-archives.apache.org/mod_mbox/giraph-user/201408.mbox/%3C53F4C689.5060101@web.de%3E
>> 
>> without success.
>> Then I try to add all jars I can from giraph adding the following lines into the
hadoop-env.sh:
>> 
>> export MYLIB=/opt/yarn/hadoop-2.5.1/share/myLib/*.jar:/Users/ale/extprj/giraph/myGiraph/*.jar:/Users/ale/extprj/giraph/myGiraph/lib/*.jar
>> export HADOOP_CLASSPATH=$HADOOP_CLASSPATH:$MYLIB
>> 
>> 
>> when I run the application now I see this:
>> 
>> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce
>> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name 
>> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/myLib/*.jar
>> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/myLib
>> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /Users/ale/extprj/giraph/myGiraph/*.jar
>> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /Users/ale/extprj/giraph/myGiraph
>> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /Users/ale/extprj/giraph/myGiraph/lib/*.jar
>> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /Users/ale/extprj/giraph/myGiraph/lib
>> 
>> 
>> But again the same error. What I think is that there is no problem in the library
but while is starting up.
>> I saw this piece in the logs:
>> 
>> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: ApplicationSumbissionContext for GiraphApplicationMaster
launch container is populated.
>> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Submitting application to ASM
>> 14/11/06 10:06:06 INFO impl.YarnClientImpl: Submitted application application_1415264041937_0005
>> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Got new appId after submission :application_1415264041937_0005
>> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: GiraphApplicationMaster container request
was submitted to ResourceManager for job: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation
>> 14/11/06 10:06:07 INFO yarn.GiraphYarnClient: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation,
Elapsed: 0,83 secs
>> 
>> 
>> That show that it is able to load GiraphApplicationMaster but fail during the startup.
>> Where can I find more logs?
>> 
>> Thanks,
>> Alessandro
>> 
>> 
>> Il giorno 06/nov/2014, alle ore 06:56, Tripti Singh <tripti@yahoo-inc.com>
ha scritto:
>> 
>>> Can u run the following command to find container logs and post it here:
>>> 
>>> yarn logs -applicationId application_1415203231170_0002
>>> 
>>> If u find this error:
>>> Could not find or load main class org.apache.giraph.yarn.GiraphApplicationMaster
>>> It may just be due to non-availablity of the yarn jars
>>> Thanks,
>>> Tripti
>>> Tech Yahoo
>>> 
>>> From: Jing Fan <fanjing09@gmail.com>
>>> Reply-To: "user@giraph.apache.org" <user@giraph.apache.org>
>>> Date: Thursday, November 6, 2014 at 1:56 AM
>>> To: "user@giraph.apache.org" <user@giraph.apache.org>
>>> Subject: Re: Help with Giraph on Yarn
>>> 
>>> Then do you know to solve this error?
>>> 
>>> 14/11/05 10:25:29 ERROR yarn.GiraphYarnClient: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation
reports FAILED state, diagnostics show: Application application_1415203231170_0002 failed
2 times due to AM Container for appattempt_1415203231170_0002_000002 exited with  exitCode:
1 due to: Exception from container-launch.
>>> Container id: container_1415203231170_0002_02_000001
>>> Exit code: 1
>>> Stack trace: ExitCodeException exitCode=1: 
>>> at org.apache.hadoop.util.Shell.runCommand(Shell.java:538)
>>> at org.apache.hadoop.util.Shell.run(Shell.java:455)
>>> at org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:702)
>>> at org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:196)
>>> at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:299)
>>> at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:81)
>>> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
>>> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
>>> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
>>> at java.lang.Thread.run(Thread.java:745)
>>> 
>>> 
>>> On Wed, Nov 5, 2014 at 12:10 PM, Alessandro Negro <alenegro81@yahoo.it>
wrote:
>>>> Hi,
>>>> in the mean time I found the reason why it hangs for long time here:
>>>> 
>>>> base path checking .
>>>> 
>>>> 
>>>> It scan all the directory tree starting from current directory, if you run
it into your home (and you have a lot of files and directories) it takes ages to complete.
>>>> 
>>>> I continue to got the same error.
>>>> 
>>>> Regards,
>>>> Alessandro
>>>> 
>>>> Il giorno 05/nov/2014, alle ore 18:33, Jing Fan <fanjing09@gmail.com>
ha scritto:
>>>> 
>>>>> I run with:
>>>>> 
>>>>> hadoop jar giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.0-cdh5.2.0-jar-with-dependencies.jar
org.apache.giraph.GiraphRunner org.apache.giraph.examples.SimpleShortestPathsComputation -vif
org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat -vip /user/jing/tiny_graph.txt
-vof org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op /user/jing/shortestpaths
-w 1 -yj giraph-core/target/giraph-1.1.0-SNAPSHOT-for-hadoop-2.5.0-cdh5.2.0-jar-with-dependencies.jar
>>>>> 
>>>>> On Wed, Nov 5, 2014 at 11:25 AM, Alessandro Negro <alenegro81@yahoo.it>
wrote:
>>>>>> This is my complete logs with the command I run:
>>>>>> 
>>>>>> 
>>>>>> ale:~ />$HADOOP_INSTALL/bin/hadoop jar /Users/ale/extprj/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar
org.apache.giraph.GiraphRunner org.apache.giraph.examples.SimpleShortestPathsComputation -vif
org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat -vip /tiny_graph.txt
-vof org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op /shortestpaths -w 1
>>>>>> 2014-11-05 13:39:30.235 java[3147:1903] Unable to load realm info
from SCDynamicStore
>>>>>> 14/11/05 13:39:30 WARN util.NativeCodeLoader: Unable to load native-hadoop
library for your platform... using builtin-java classes where applicable
>>>>>> 14/11/05 13:39:30 INFO utils.ConfigurationUtils: No edge input format
specified. Ensure your InputFormat does not require one.
>>>>>> 14/11/05 13:39:30 INFO utils.ConfigurationUtils: No edge output format
specified. Ensure your OutputFormat does not require one.
>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Final output path is:
hdfs://hadoop-master:9000/shortestpaths
>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Running Client
>>>>>> 14/11/05 13:39:31 INFO client.RMProxy: Connecting to ResourceManager
at /0.0.0.0:8032
>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Got node report from
ASM for, nodeId=192.168.0.105:50658, nodeAddress 192.168.0.105:8042, nodeRackName /default-rack,
nodeNumContainers 0
>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Defaulting per-task
heap size to 1024MB.
>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Obtained new Application
ID: application_1415189069846_0004
>>>>>> 14/11/05 13:39:31 INFO Configuration.deprecation: mapred.job.id is
deprecated. Instead, use mapreduce.job.id
>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Set the environment
for the application master
>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Environment for AM
:{CLASSPATH=${CLASSPATH}:./*:$HADOOP_CONF_DIR:$HADOOP_COMMON_HOME/share/hadoop/common/*:$HADOOP_COMMON_HOME/share/hadoop/common/lib/*:$HADOOP_HDFS_HOME/share/hadoop/hdfs/*:$HADOOP_HDFS_HOME/share/hadoop/hdfs/lib/*:$HADOOP_YARN_HOME/share/hadoop/yarn/*:$HADOOP_YARN_HOME/share/hadoop/yarn/lib/*:$HADOOP_MAPRED_HOME/share/hadoop/mapreduce/*:$HADOOP_MAPRED_HOME/share/hadoop/mapreduce/lib/*}
>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: buildLocalResourceMap
....
>>>>>> 14/11/05 13:39:31 INFO yarn.YarnUtils: Registered file in LocalResources
:: hdfs://hadoop-master:9000/user/ale/giraph_yarn_jar_cache/application_1415189069846_0004/giraph-conf.xml
>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: LIB JARS :
>>>>>> 14/11/05 13:39:31 INFO yarn.YarnUtils: Class path name .
>>>>>> 14/11/05 13:39:31 INFO yarn.YarnUtils: base path checking .
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name null
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking null
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/etc/hadoop
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/etc/hadoop
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/common/lib/*
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/common/lib
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/common/*
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/common
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs/lib/*
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs/lib
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs/*
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/yarn/lib/*
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/yarn/lib
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/yarn/*
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/yarn
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce/lib/*
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce/lib
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce/*
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /contrib/capacity-scheduler/*.jar
>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /contrib/capacity-scheduler
>>>>>> 14/11/05 14:42:56 INFO yarn.GiraphYarnClient: ApplicationSumbissionContext
for GiraphApplicationMaster launch container is populated.
>>>>>> 14/11/05 14:42:56 INFO yarn.GiraphYarnClient: Submitting application
to ASM
>>>>>> 14/11/05 14:42:57 INFO impl.YarnClientImpl: Submitted application
application_1415189069846_0004
>>>>>> 14/11/05 14:42:57 INFO yarn.GiraphYarnClient: Got new appId after
submission :application_1415189069846_0004
>>>>>> 14/11/05 14:42:57 INFO yarn.GiraphYarnClient: GiraphApplicationMaster
container request was submitted to ResourceManager for job: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation
>>>>>> 14/11/05 14:42:57 INFO yarn.GiraphYarnClient: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation,
Elapsed: 0,82 secs
>>>>>> 14/11/05 14:42:57 INFO yarn.GiraphYarnClient: appattempt_1415189069846_0004_000001,
State: ACCEPTED, Containers used: 1
>>>>>> 14/11/05 14:43:01 ERROR yarn.GiraphYarnClient: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation
reports FAILED state, diagnostics show: Application application_1415189069846_0004 failed
2 times due to AM Container for appattempt_1415189069846_0004_000002 exited with  exitCode:
1 due to: Exception from container-launch: ExitCodeException exitCode=1: 
>>>>>> ExitCodeException exitCode=1: 
>>>>>> at org.apache.hadoop.util.Shell.runCommand(Shell.java:538)
>>>>>> at org.apache.hadoop.util.Shell.run(Shell.java:455)
>>>>>> at org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:702)
>>>>>> at org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:195)
>>>>>> at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:300)
>>>>>> at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:81)
>>>>>> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
>>>>>> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
>>>>>> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
>>>>>> at java.lang.Thread.run(Thread.java:744)
>>>>>> 
>>>>>> 
>>>>>> Container exited with a non-zero exit code 1
>>>>>> .Failing this attempt.. Failing the application.
>>>>>> 14/11/05 14:43:01 INFO yarn.GiraphYarnClient: Cleaning up HDFS distributed
cache directory for Giraph job.
>>>>>> 14/11/05 14:43:01 INFO yarn.GiraphYarnClient: Completed Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation:
FAILED, total running time: 0 minutes, 3 seconds.
>>>>>> 
>>>>>> 
>>>>>> Il giorno 05/nov/2014, alle ore 18:17, Tripti Singh <tripti@yahoo-inc.com>
ha scritto:
>>>>>> 
>>>>>>> I faced the similar problem where the workflow just hangs. 
>>>>>>> Can u see in ur logs if there is a task with id 0.
>>>>>>> I made a local fix and I could give u the patch if u see a similar
problem and ur workflow is unable to find the zookeeper manager file and repeats the following
message:
>>>>>>> For task xyz, got file 'null'
>>>>>>> 
>>>>>>> Thanks,
>>>>>>> Tripti
>>>>>>> Sent from my iPhone
>>>>>>> 
>>>>>>> On 05-Nov-2014, at 10:40 pm, "Alessandro Negro" <alenegro81@yahoo.it>
wrote:
>>>>>>> 
>>>>>>>> Hi,
>>>>>>>> have you seen the hadoop logs?
>>>>>>>> Could you write here how are you running the command?
>>>>>>>> 
>>>>>>>> Thanks,
>>>>>>>> Alessandro
>>>>>>>> 
>>>>>>>> Il giorno 05/nov/2014, alle ore 18:04, Jing Fan <fanjing09@gmail.com>
ha scritto:
>>>>>>>> 
>>>>>>>>> Yeah, I add -yj option. The result is the same. Still
error here.
>>>>>>>>> 
>>>>>>>>> On Wed, Nov 5, 2014 at 10:52 AM, Alessandro Negro <alenegro81@yahoo.it>
wrote:
>>>>>>>>>> Hi Jing,
>>>>>>>>>> I’m facing the same problem. Do you check the hadoop
logs? In my case I got: 
>>>>>>>>>> Could not find or load main class org.apache.giraph.yarn.GiraphApplicationMaster
>>>>>>>>>> Moreover I don’t know why my application hang for
a long time here:
>>>>>>>>>> 
>>>>>>>>>> 14/11/05 17:11:17 INFO yarn.YarnUtils: base path
checking .
>>>>>>>>>> 
>>>>>>>>>> And then continue failing with your error into the
output and the other into the hadoop logs.
>>>>>>>>>> 
>>>>>>>>>> Did you test adding this?
>>>>>>>>>> 
>>>>>>>>>> -yj /Users/ale/extprj/giraph/giraph-core/target/giraph-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar
>>>>>>>>>> 
>>>>>>>>>> Thanks,
>>>>>>>>>> Alessandro 
>>>>>>>>>> 
>>>>>>>>>> 
>>>>>>>>>> Il giorno 05/nov/2014, alle ore 17:32, Jing Fan <fanjing09@gmail.com>
ha scritto:
>>>>>>>>>> 
>>>>>>>>>>> Hi,
>>>>>>>>>>> 
>>>>>>>>>>> I install the Giraph with Yarn.
>>>>>>>>>>> But when I run the program with following command:
>>>>>>>>>>> 
>>>>>>>>>>>  hadoop jar giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.0-cdh5.2.0-jar-with-dependencies.jar
org.apache.giraph.GiraphRunner org.apache.giraph.examples.SimpleShortestPathsComputation -vif
org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat -vip /user/j/tiny_graph.txt
-vof org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op /user/j/shortestpaths -w
1
>>>>>>>>>>> 
>>>>>>>>>>> The program exited with error:
>>>>>>>>>>> 
>>>>>>>>>>> 14/11/05 10:25:14 INFO yarn.GiraphYarnClient:
Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation, Elapsed: 0.83 secs
>>>>>>>>>>> 14/11/05 10:25:14 INFO yarn.GiraphYarnClient:
appattempt_1415203231170_0002_000001, State: ACCEPTED, Containers used: 0
>>>>>>>>>>> 14/11/05 10:25:18 INFO yarn.GiraphYarnClient:
Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation, Elapsed: 4.84 secs
>>>>>>>>>>> 14/11/05 10:25:18 INFO yarn.GiraphYarnClient:
appattempt_1415203231170_0002_000001, State: ACCEPTED, Containers used: 0
>>>>>>>>>>> 14/11/05 10:25:22 INFO yarn.GiraphYarnClient:
Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation, Elapsed: 8.85 secs
>>>>>>>>>>> 14/11/05 10:25:22 INFO yarn.GiraphYarnClient:
appattempt_1415203231170_0002_000002, State: ACCEPTED, Containers used: 0
>>>>>>>>>>> 14/11/05 10:25:26 INFO yarn.GiraphYarnClient:
Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation, Elapsed: 12.86 secs
>>>>>>>>>>> 14/11/05 10:25:26 INFO yarn.GiraphYarnClient:
appattempt_1415203231170_0002_000002, State: ACCEPTED, Containers used: 0
>>>>>>>>>>> 14/11/05 10:25:29 ERROR yarn.GiraphYarnClient:
Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation reports FAILED state, diagnostics
show: Application application_1415203231170_0002 failed 2 times due to AM Container for appattempt_1415203231170_0002_000002
exited with  exitCode: 1 due to: Exception from container-launch.
>>>>>>>>>>> Container id: container_1415203231170_0002_02_000001
>>>>>>>>>>> Exit code: 1
>>>>>>>>>>> Stack trace: ExitCodeException exitCode=1: 
>>>>>>>>>>> at org.apache.hadoop.util.Shell.runCommand(Shell.java:538)
>>>>>>>>>>> at org.apache.hadoop.util.Shell.run(Shell.java:455)
>>>>>>>>>>> at org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:702)
>>>>>>>>>>> at org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:196)
>>>>>>>>>>> at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:299)
>>>>>>>>>>> at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:81)
>>>>>>>>>>> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
>>>>>>>>>>> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
>>>>>>>>>>> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
>>>>>>>>>>> at java.lang.Thread.run(Thread.java:745)
>>>>>>>>>>> 
>>>>>>>>>>> 
>>>>>>>>>>> Anyone can help?
>>>>>>>>>>> 
>>>>>>>>>> 
>>>>>>>>> 
>>>>>>>> 
>>>>>> 
>>>>> 
>>>> 
>>> 
>> 


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