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From Alessandro Negro <alenegr...@yahoo.it>
Subject Re: Help with Giraph on Yarn
Date Thu, 06 Nov 2014 10:18:05 GMT
Hi Tripti,
let me add one info, As you can see from this thread of email: 

http://mail-archives.apache.org/mod_mbox/giraph-user/201410.mbox/%3CC3F75A98-BDE8-4205-971F-1F7241E6E83F@yahoo.it%3E

I had some issue while compiling for Hadoop 2.5.1 could be that into the process I loose something?

Thanks again,
Alessandro



Il giorno 06/nov/2014, alle ore 10:47, Alessandro Negro <alenegro81@yahoo.it> ha scritto:

> Hi Tripti,
> yes I run in this way:
> 
> 
> $HADOOP_INSTALL/bin/hadoop jar /Users/ale/extprj/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar
org.apache.giraph.GiraphRunner org.apache.giraph.examples.SimpleShortestPathsComputation -vif
org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat -vip /tiny_graph.txt
-vof org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op /shortestpaths -w 1 -yj
/Users/ale/extprj/giraph/giraph-core/target/giraph-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar,/Users/ale/extprj/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar
> 
> And this is the complete trace:
> 
> 2014-11-06 10:06:05.638 java[7778:1903] Unable to load realm info from SCDynamicStore
> 14/11/06 10:06:05 WARN util.NativeCodeLoader: Unable to load native-hadoop library for
your platform... using builtin-java classes where applicable
> 14/11/06 10:06:06 INFO utils.ConfigurationUtils: No edge input format specified. Ensure
your InputFormat does not require one.
> 14/11/06 10:06:06 INFO utils.ConfigurationUtils: No edge output format specified. Ensure
your OutputFormat does not require one.
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Final output path is: hdfs://hadoop-master:9000/shortestpaths
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Running Client
> 14/11/06 10:06:06 INFO client.RMProxy: Connecting to ResourceManager at /0.0.0.0:8032
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Got node report from ASM for, nodeId=10.61.137.28:59677,
nodeAddress 10.61.137.28:8042, nodeRackName /default-rack, nodeNumContainers 0
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Defaulting per-task heap size to 1024MB.
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Obtained new Application ID: application_1415264041937_0005
> 14/11/06 10:06:06 INFO Configuration.deprecation: mapred.job.id is deprecated. Instead,
use mapreduce.job.id
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Set the environment for the application
master
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Environment for AM :{CLASSPATH=${CLASSPATH}:./*:$HADOOP_CONF_DIR:$HADOOP_COMMON_HOME/share/hadoop/common/*:$HADOOP_COMMON_HOME/share/hadoop/common/lib/*:$HADOOP_HDFS_HOME/share/hadoop/hdfs/*:$HADOOP_HDFS_HOME/share/hadoop/hdfs/lib/*:$HADOOP_YARN_HOME/share/hadoop/yarn/*:$HADOOP_YARN_HOME/share/hadoop/yarn/lib/*:$HADOOP_MAPRED_HOME/share/hadoop/mapreduce/*:$HADOOP_MAPRED_HOME/share/hadoop/mapreduce/lib/*}
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: buildLocalResourceMap ....
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Registered file in LocalResources :: hdfs://hadoop-master:9000/user/ale/giraph_yarn_jar_cache/application_1415264041937_0005/giraph-conf.xml
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: LIB JARS :/Users/ale/extprj/giraph/giraph-core/target/giraph-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar,/Users/ale/extprj/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name .
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking .
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name null
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking null
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/etc/hadoop
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/etc/hadoop
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/common/lib/*
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/common/lib
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/common/*
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/common
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs/lib/*
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs/lib
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs/*
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/yarn/lib/*
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/yarn/lib
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/yarn/*
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/yarn
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce/lib/*
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce/lib
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce/*
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name 
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/myLib/*.jar
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/myLib
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /Users/ale/extprj/giraph/myGiraph/*.jar
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /Users/ale/extprj/giraph/myGiraph
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /Users/ale/extprj/giraph/myGiraph/lib/*.jar
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /Users/ale/extprj/giraph/myGiraph/lib
> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /contrib/capacity-scheduler/*.jar
> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /contrib/capacity-scheduler
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: ApplicationSumbissionContext for GiraphApplicationMaster
launch container is populated.
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Submitting application to ASM
> 14/11/06 10:06:06 INFO impl.YarnClientImpl: Submitted application application_1415264041937_0005
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Got new appId after submission :application_1415264041937_0005
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: GiraphApplicationMaster container request
was submitted to ResourceManager for job: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation
> 14/11/06 10:06:07 INFO yarn.GiraphYarnClient: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation,
Elapsed: 0,83 secs
> 14/11/06 10:06:07 INFO yarn.GiraphYarnClient: appattempt_1415264041937_0005_000001, State:
ACCEPTED, Containers used: 1
> 14/11/06 10:06:10 ERROR yarn.GiraphYarnClient: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation
reports FAILED state, diagnostics show: Application application_1415264041937_0005 failed
2 times due to AM Container for appattempt_1415264041937_0005_000002 exited with  exitCode:
1 due to: Exception from container-launch: ExitCodeException exitCode=1: 
> ExitCodeException exitCode=1: 
> 	at org.apache.hadoop.util.Shell.runCommand(Shell.java:538)
> 	at org.apache.hadoop.util.Shell.run(Shell.java:455)
> 	at org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:702)
> 	at org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:195)
> 	at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:300)
> 	at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:81)
> 	at java.util.concurrent.FutureTask.run(FutureTask.java:262)
> 	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
> 	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> 	at java.lang.Thread.run(Thread.java:744)
> 
> 
> Container exited with a non-zero exit code 1
> .Failing this attempt.. Failing the application.
> 14/11/06 10:06:10 INFO yarn.GiraphYarnClient: Cleaning up HDFS distributed cache directory
for Giraph job.
> 14/11/06 10:06:10 INFO yarn.GiraphYarnClient: Completed Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation:
FAILED, total running time: 0 minutes, 3 seconds.
> ale:~/extprj/giraph/myGiraph />yarn logs -applicationId application_1415264041937_0005
> 
> As you can see there is this piece:
> 
> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: LIB JARS :/Users/ale/extprj/giraph/giraph-core/target/giraph-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar,/Users/ale/extprj/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar
> 
> 
> But I continue to receive the error:
> 
> Thanks,
> Alessandro
> 
> 
> Il giorno 06/nov/2014, alle ore 10:25, Tripti Singh <tripti@yahoo-inc.com> ha scritto:
> 
>> For GiraphApplicationMaster not found, the simple thing that worked for me was adding
a -yj parameter to my command. 
>> (hadoop jar {jar-file-path} {path to giraph runner} {computation-class} {bunch of
parameters} -yj {jar-file-name})
>> If u look at job logs,
>> Do u see a log statement defining "LIB JARS"?
>> 
>> Sent from my iPhone
>> 
>> On 06-Nov-2014, at 2:45 pm, "Alessandro Negro" <alenegro81@yahoo.it> wrote:
>> 
>>> Hi,
>>> yea my logs shows that error. I follow this example:
>>> 
>>> http://mail-archives.apache.org/mod_mbox/giraph-user/201408.mbox/%3C53F4C689.5060101@web.de%3E
>>> 
>>> without success.
>>> Then I try to add all jars I can from giraph adding the following lines into
the hadoop-env.sh:
>>> 
>>> export MYLIB=/opt/yarn/hadoop-2.5.1/share/myLib/*.jar:/Users/ale/extprj/giraph/myGiraph/*.jar:/Users/ale/extprj/giraph/myGiraph/lib/*.jar
>>> export HADOOP_CLASSPATH=$HADOOP_CLASSPATH:$MYLIB
>>> 
>>> 
>>> when I run the application now I see this:
>>> 
>>> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce
>>> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name 
>>> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/myLib/*.jar
>>> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/myLib
>>> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /Users/ale/extprj/giraph/myGiraph/*.jar
>>> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /Users/ale/extprj/giraph/myGiraph
>>> 14/11/06 10:06:06 INFO yarn.YarnUtils: Class path name /Users/ale/extprj/giraph/myGiraph/lib/*.jar
>>> 14/11/06 10:06:06 INFO yarn.YarnUtils: base path checking /Users/ale/extprj/giraph/myGiraph/lib
>>> 
>>> 
>>> But again the same error. What I think is that there is no problem in the library
but while is starting up.
>>> I saw this piece in the logs:
>>> 
>>> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: ApplicationSumbissionContext for
GiraphApplicationMaster launch container is populated.
>>> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Submitting application to ASM
>>> 14/11/06 10:06:06 INFO impl.YarnClientImpl: Submitted application application_1415264041937_0005
>>> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: Got new appId after submission
:application_1415264041937_0005
>>> 14/11/06 10:06:06 INFO yarn.GiraphYarnClient: GiraphApplicationMaster container
request was submitted to ResourceManager for job: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation
>>> 14/11/06 10:06:07 INFO yarn.GiraphYarnClient: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation,
Elapsed: 0,83 secs
>>> 
>>> 
>>> That show that it is able to load GiraphApplicationMaster but fail during the
startup.
>>> Where can I find more logs?
>>> 
>>> Thanks,
>>> Alessandro
>>> 
>>> 
>>> Il giorno 06/nov/2014, alle ore 06:56, Tripti Singh <tripti@yahoo-inc.com>
ha scritto:
>>> 
>>>> Can u run the following command to find container logs and post it here:
>>>> 
>>>> yarn logs -applicationId application_1415203231170_0002
>>>> 
>>>> If u find this error:
>>>> Could not find or load main class org.apache.giraph.yarn.GiraphApplicationMaster
>>>> It may just be due to non-availablity of the yarn jars
>>>> Thanks,
>>>> Tripti
>>>> Tech Yahoo
>>>> 
>>>> From: Jing Fan <fanjing09@gmail.com>
>>>> Reply-To: "user@giraph.apache.org" <user@giraph.apache.org>
>>>> Date: Thursday, November 6, 2014 at 1:56 AM
>>>> To: "user@giraph.apache.org" <user@giraph.apache.org>
>>>> Subject: Re: Help with Giraph on Yarn
>>>> 
>>>> Then do you know to solve this error?
>>>> 
>>>> 14/11/05 10:25:29 ERROR yarn.GiraphYarnClient: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation
reports FAILED state, diagnostics show: Application application_1415203231170_0002 failed
2 times due to AM Container for appattempt_1415203231170_0002_000002 exited with  exitCode:
1 due to: Exception from container-launch.
>>>> Container id: container_1415203231170_0002_02_000001
>>>> Exit code: 1
>>>> Stack trace: ExitCodeException exitCode=1: 
>>>> at org.apache.hadoop.util.Shell.runCommand(Shell.java:538)
>>>> at org.apache.hadoop.util.Shell.run(Shell.java:455)
>>>> at org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:702)
>>>> at org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:196)
>>>> at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:299)
>>>> at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:81)
>>>> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
>>>> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
>>>> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
>>>> at java.lang.Thread.run(Thread.java:745)
>>>> 
>>>> 
>>>> On Wed, Nov 5, 2014 at 12:10 PM, Alessandro Negro <alenegro81@yahoo.it>
wrote:
>>>>> Hi,
>>>>> in the mean time I found the reason why it hangs for long time here:
>>>>> 
>>>>> base path checking .
>>>>> 
>>>>> 
>>>>> It scan all the directory tree starting from current directory, if you
run it into your home (and you have a lot of files and directories) it takes ages to complete.
>>>>> 
>>>>> I continue to got the same error.
>>>>> 
>>>>> Regards,
>>>>> Alessandro
>>>>> 
>>>>> Il giorno 05/nov/2014, alle ore 18:33, Jing Fan <fanjing09@gmail.com>
ha scritto:
>>>>> 
>>>>>> I run with:
>>>>>> 
>>>>>> hadoop jar giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.0-cdh5.2.0-jar-with-dependencies.jar
org.apache.giraph.GiraphRunner org.apache.giraph.examples.SimpleShortestPathsComputation -vif
org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat -vip /user/jing/tiny_graph.txt
-vof org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op /user/jing/shortestpaths
-w 1 -yj giraph-core/target/giraph-1.1.0-SNAPSHOT-for-hadoop-2.5.0-cdh5.2.0-jar-with-dependencies.jar
>>>>>> 
>>>>>> On Wed, Nov 5, 2014 at 11:25 AM, Alessandro Negro <alenegro81@yahoo.it>
wrote:
>>>>>>> This is my complete logs with the command I run:
>>>>>>> 
>>>>>>> 
>>>>>>> ale:~ />$HADOOP_INSTALL/bin/hadoop jar /Users/ale/extprj/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar
org.apache.giraph.GiraphRunner org.apache.giraph.examples.SimpleShortestPathsComputation -vif
org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat -vip /tiny_graph.txt
-vof org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op /shortestpaths -w 1
>>>>>>> 2014-11-05 13:39:30.235 java[3147:1903] Unable to load realm
info from SCDynamicStore
>>>>>>> 14/11/05 13:39:30 WARN util.NativeCodeLoader: Unable to load
native-hadoop library for your platform... using builtin-java classes where applicable
>>>>>>> 14/11/05 13:39:30 INFO utils.ConfigurationUtils: No edge input
format specified. Ensure your InputFormat does not require one.
>>>>>>> 14/11/05 13:39:30 INFO utils.ConfigurationUtils: No edge output
format specified. Ensure your OutputFormat does not require one.
>>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Final output path
is: hdfs://hadoop-master:9000/shortestpaths
>>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Running Client
>>>>>>> 14/11/05 13:39:31 INFO client.RMProxy: Connecting to ResourceManager
at /0.0.0.0:8032
>>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Got node report
from ASM for, nodeId=192.168.0.105:50658, nodeAddress 192.168.0.105:8042, nodeRackName /default-rack,
nodeNumContainers 0
>>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Defaulting per-task
heap size to 1024MB.
>>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Obtained new Application
ID: application_1415189069846_0004
>>>>>>> 14/11/05 13:39:31 INFO Configuration.deprecation: mapred.job.id
is deprecated. Instead, use mapreduce.job.id
>>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Set the environment
for the application master
>>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: Environment for
AM :{CLASSPATH=${CLASSPATH}:./*:$HADOOP_CONF_DIR:$HADOOP_COMMON_HOME/share/hadoop/common/*:$HADOOP_COMMON_HOME/share/hadoop/common/lib/*:$HADOOP_HDFS_HOME/share/hadoop/hdfs/*:$HADOOP_HDFS_HOME/share/hadoop/hdfs/lib/*:$HADOOP_YARN_HOME/share/hadoop/yarn/*:$HADOOP_YARN_HOME/share/hadoop/yarn/lib/*:$HADOOP_MAPRED_HOME/share/hadoop/mapreduce/*:$HADOOP_MAPRED_HOME/share/hadoop/mapreduce/lib/*}
>>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: buildLocalResourceMap
....
>>>>>>> 14/11/05 13:39:31 INFO yarn.YarnUtils: Registered file in LocalResources
:: hdfs://hadoop-master:9000/user/ale/giraph_yarn_jar_cache/application_1415189069846_0004/giraph-conf.xml
>>>>>>> 14/11/05 13:39:31 INFO yarn.GiraphYarnClient: LIB JARS :
>>>>>>> 14/11/05 13:39:31 INFO yarn.YarnUtils: Class path name .
>>>>>>> 14/11/05 13:39:31 INFO yarn.YarnUtils: base path checking .
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name null
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking null
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/etc/hadoop
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/etc/hadoop
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/common/lib/*
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/common/lib
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/common/*
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/common
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs/lib/*
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs/lib
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs/*
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/hdfs
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/yarn/lib/*
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/yarn/lib
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/yarn/*
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/yarn
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce/lib/*
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce/lib
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce/*
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /opt/yarn/hadoop-2.5.1/share/hadoop/mapreduce
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: Class path name /contrib/capacity-scheduler/*.jar
>>>>>>> 14/11/05 14:42:56 INFO yarn.YarnUtils: base path checking /contrib/capacity-scheduler
>>>>>>> 14/11/05 14:42:56 INFO yarn.GiraphYarnClient: ApplicationSumbissionContext
for GiraphApplicationMaster launch container is populated.
>>>>>>> 14/11/05 14:42:56 INFO yarn.GiraphYarnClient: Submitting application
to ASM
>>>>>>> 14/11/05 14:42:57 INFO impl.YarnClientImpl: Submitted application
application_1415189069846_0004
>>>>>>> 14/11/05 14:42:57 INFO yarn.GiraphYarnClient: Got new appId after
submission :application_1415189069846_0004
>>>>>>> 14/11/05 14:42:57 INFO yarn.GiraphYarnClient: GiraphApplicationMaster
container request was submitted to ResourceManager for job: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation
>>>>>>> 14/11/05 14:42:57 INFO yarn.GiraphYarnClient: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation,
Elapsed: 0,82 secs
>>>>>>> 14/11/05 14:42:57 INFO yarn.GiraphYarnClient: appattempt_1415189069846_0004_000001,
State: ACCEPTED, Containers used: 1
>>>>>>> 14/11/05 14:43:01 ERROR yarn.GiraphYarnClient: Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation
reports FAILED state, diagnostics show: Application application_1415189069846_0004 failed
2 times due to AM Container for appattempt_1415189069846_0004_000002 exited with  exitCode:
1 due to: Exception from container-launch: ExitCodeException exitCode=1: 
>>>>>>> ExitCodeException exitCode=1: 
>>>>>>> at org.apache.hadoop.util.Shell.runCommand(Shell.java:538)
>>>>>>> at org.apache.hadoop.util.Shell.run(Shell.java:455)
>>>>>>> at org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:702)
>>>>>>> at org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:195)
>>>>>>> at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:300)
>>>>>>> at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:81)
>>>>>>> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
>>>>>>> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
>>>>>>> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
>>>>>>> at java.lang.Thread.run(Thread.java:744)
>>>>>>> 
>>>>>>> 
>>>>>>> Container exited with a non-zero exit code 1
>>>>>>> .Failing this attempt.. Failing the application.
>>>>>>> 14/11/05 14:43:01 INFO yarn.GiraphYarnClient: Cleaning up HDFS
distributed cache directory for Giraph job.
>>>>>>> 14/11/05 14:43:01 INFO yarn.GiraphYarnClient: Completed Giraph:
org.apache.giraph.examples.SimpleShortestPathsComputation: FAILED, total running time: 0 minutes,
3 seconds.
>>>>>>> 
>>>>>>> 
>>>>>>> Il giorno 05/nov/2014, alle ore 18:17, Tripti Singh <tripti@yahoo-inc.com>
ha scritto:
>>>>>>> 
>>>>>>>> I faced the similar problem where the workflow just hangs.

>>>>>>>> Can u see in ur logs if there is a task with id 0.
>>>>>>>> I made a local fix and I could give u the patch if u see
a similar problem and ur workflow is unable to find the zookeeper manager file and repeats
the following message:
>>>>>>>> For task xyz, got file 'null'
>>>>>>>> 
>>>>>>>> Thanks,
>>>>>>>> Tripti
>>>>>>>> Sent from my iPhone
>>>>>>>> 
>>>>>>>> On 05-Nov-2014, at 10:40 pm, "Alessandro Negro" <alenegro81@yahoo.it>
wrote:
>>>>>>>> 
>>>>>>>>> Hi,
>>>>>>>>> have you seen the hadoop logs?
>>>>>>>>> Could you write here how are you running the command?
>>>>>>>>> 
>>>>>>>>> Thanks,
>>>>>>>>> Alessandro
>>>>>>>>> 
>>>>>>>>> Il giorno 05/nov/2014, alle ore 18:04, Jing Fan <fanjing09@gmail.com>
ha scritto:
>>>>>>>>> 
>>>>>>>>>> Yeah, I add -yj option. The result is the same. Still
error here.
>>>>>>>>>> 
>>>>>>>>>> On Wed, Nov 5, 2014 at 10:52 AM, Alessandro Negro
<alenegro81@yahoo.it> wrote:
>>>>>>>>>>> Hi Jing,
>>>>>>>>>>> I’m facing the same problem. Do you check the
hadoop logs? In my case I got: 
>>>>>>>>>>> Could not find or load main class org.apache.giraph.yarn.GiraphApplicationMaster
>>>>>>>>>>> Moreover I don’t know why my application hang
for a long time here:
>>>>>>>>>>> 
>>>>>>>>>>> 14/11/05 17:11:17 INFO yarn.YarnUtils: base path
checking .
>>>>>>>>>>> 
>>>>>>>>>>> And then continue failing with your error into
the output and the other into the hadoop logs.
>>>>>>>>>>> 
>>>>>>>>>>> Did you test adding this?
>>>>>>>>>>> 
>>>>>>>>>>> -yj /Users/ale/extprj/giraph/giraph-core/target/giraph-1.1.0-SNAPSHOT-for-hadoop-2.5.1-jar-with-dependencies.jar
>>>>>>>>>>> 
>>>>>>>>>>> Thanks,
>>>>>>>>>>> Alessandro 
>>>>>>>>>>> 
>>>>>>>>>>> 
>>>>>>>>>>> Il giorno 05/nov/2014, alle ore 17:32, Jing Fan
<fanjing09@gmail.com> ha scritto:
>>>>>>>>>>> 
>>>>>>>>>>>> Hi,
>>>>>>>>>>>> 
>>>>>>>>>>>> I install the Giraph with Yarn.
>>>>>>>>>>>> But when I run the program with following
command:
>>>>>>>>>>>> 
>>>>>>>>>>>>  hadoop jar giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.5.0-cdh5.2.0-jar-with-dependencies.jar
org.apache.giraph.GiraphRunner org.apache.giraph.examples.SimpleShortestPathsComputation -vif
org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat -vip /user/j/tiny_graph.txt
-vof org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op /user/j/shortestpaths -w
1
>>>>>>>>>>>> 
>>>>>>>>>>>> The program exited with error:
>>>>>>>>>>>> 
>>>>>>>>>>>> 14/11/05 10:25:14 INFO yarn.GiraphYarnClient:
Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation, Elapsed: 0.83 secs
>>>>>>>>>>>> 14/11/05 10:25:14 INFO yarn.GiraphYarnClient:
appattempt_1415203231170_0002_000001, State: ACCEPTED, Containers used: 0
>>>>>>>>>>>> 14/11/05 10:25:18 INFO yarn.GiraphYarnClient:
Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation, Elapsed: 4.84 secs
>>>>>>>>>>>> 14/11/05 10:25:18 INFO yarn.GiraphYarnClient:
appattempt_1415203231170_0002_000001, State: ACCEPTED, Containers used: 0
>>>>>>>>>>>> 14/11/05 10:25:22 INFO yarn.GiraphYarnClient:
Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation, Elapsed: 8.85 secs
>>>>>>>>>>>> 14/11/05 10:25:22 INFO yarn.GiraphYarnClient:
appattempt_1415203231170_0002_000002, State: ACCEPTED, Containers used: 0
>>>>>>>>>>>> 14/11/05 10:25:26 INFO yarn.GiraphYarnClient:
Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation, Elapsed: 12.86 secs
>>>>>>>>>>>> 14/11/05 10:25:26 INFO yarn.GiraphYarnClient:
appattempt_1415203231170_0002_000002, State: ACCEPTED, Containers used: 0
>>>>>>>>>>>> 14/11/05 10:25:29 ERROR yarn.GiraphYarnClient:
Giraph: org.apache.giraph.examples.SimpleShortestPathsComputation reports FAILED state, diagnostics
show: Application application_1415203231170_0002 failed 2 times due to AM Container for appattempt_1415203231170_0002_000002
exited with  exitCode: 1 due to: Exception from container-launch.
>>>>>>>>>>>> Container id: container_1415203231170_0002_02_000001
>>>>>>>>>>>> Exit code: 1
>>>>>>>>>>>> Stack trace: ExitCodeException exitCode=1:

>>>>>>>>>>>> at org.apache.hadoop.util.Shell.runCommand(Shell.java:538)
>>>>>>>>>>>> at org.apache.hadoop.util.Shell.run(Shell.java:455)
>>>>>>>>>>>> at org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:702)
>>>>>>>>>>>> at org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:196)
>>>>>>>>>>>> at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:299)
>>>>>>>>>>>> at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:81)
>>>>>>>>>>>> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
>>>>>>>>>>>> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
>>>>>>>>>>>> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
>>>>>>>>>>>> at java.lang.Thread.run(Thread.java:745)
>>>>>>>>>>>> 
>>>>>>>>>>>> 
>>>>>>>>>>>> Anyone can help?
>>>>>>>>>>>> 
>>>>>>>>>>> 
>>>>>>>>>> 
>>>>>>>>> 
>>>>>>> 
>>>>>> 
>>>>> 
>>>> 
>>> 
> 


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