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From Rafal Wojdyla <ravwojd...@gmail.com>
Subject Re: GiraphApplicationMaster not found (WAS: Giraph and Hadoop 2.2.0)
Date Mon, 09 Dec 2013 10:24:04 GMT
Hi all!

I had the same problems as you guys:

@Rob:
Did you check if *org.apache.giraph.yarn.GiraphApplicationMaster* is actually
in the jar file - it wasn't it my case - I'm using custom profile in maven.
Do: *jar -tf
/Users/rvesse/Documents/Work/Code/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.2.0-jar-with-dependencies.jar
| grep org.apache.giraph.yarn.GiraphApplicationMaster*

@Vishal:
I got this error few times when cluster was highly utilized, problem
disappeared when I used queue with free resources - this may be a problem
but I haven't investigated it.

Unfortunately I wasn't able to successfully run Giraph application anyway,
due to: https://issues.apache.org/jira/browse/GIRAPH-806

Cheers - Rafal


On Sun, Dec 8, 2013 at 7:23 PM, Eli Reisman <apache.mailbox@gmail.com>wrote:

> Hi all,
>
> It looks to me like you want to run the giraph-core jar at the beginning
> of the "hadoop jar" call and supply the giraph-examples jar with -yj
> argument.
>
> Also, you can place any -D type configuration settings you're sick of
> supplying at the command line into giraph-site.xml just as you would with
> Hadoop settings in one of its own site.xml files, and place these where
> your local Hadoop client configs are and they should be picked up in your
> application.
>
> Hope that helps,
>
> Eli
>
>
>
> On Thu, Nov 28, 2013 at 12:21 PM, Vishal Mishra <mishravishal@gmail.com>wrote:
>
>> I had a mistake in my command (moronic copy/paste zookeeper settings
>> error).
>> Updated and now hitting the following:
>>
>> ....
>> 13/11/28 12:02:14 INFO yarn.GiraphYarnClient: Running Client
>> 13/11/28 12:02:14 INFO client.RMProxy: Connecting to ResourceManager at
>> master/192.168.1.100:8045
>> 13/11/28 12:02:15 INFO yarn.GiraphYarnClient: Got node report from ASM
>> for, nodeId=kreator:46477, nodeAddresskreator:8042,
>> nodeRackName/default-rack, nodeNumContainers7
>> 13/11/28 12:02:15 INFO yarn.GiraphYarnClient: Got node report from ASM
>> for, nodeId=exotica:46645, nodeAddressexotica:8042,
>> nodeRackName/default-rack, nodeNumContainers8
>> Exception in thread "main" java.lang.RuntimeException: Giraph job
>> requires 2 containers to run; cluster only hosts 15
>>  at
>> org.apache.giraph.yarn.GiraphYarnClient.checkPerNodeResourcesAvailable(GiraphYarnClient.java:230)
>> at org.apache.giraph.yarn.GiraphYarnClient.run(GiraphYarnClient.java:125)
>> ....
>>
>> It seems like some config is missing from our hadoop setup.
>> Also, note that I'm working from the trunk branch.
>>
>> Thanx,
>> Vishal
>>
>>
>> On Wed, Nov 27, 2013 at 11:34 AM, Vishal Mishra <mishravishal@gmail.com>wrote:
>>
>>> Hey Guys,
>>> I'm trying giraph 1.0.0 on hadoop 2.2.0 (2-node cluster) but hitting the
>>> same problem as outlined in this thread. Was there a resolution? If yes,
>>> can you please share?
>>> Completely new to giraph and hadoop so please excuse any omissions. Our
>>> cluster is fully functional and running mapreduce and hive jobs cleanly.
>>>
>>> Command:
>>> hadoop jar
>>> $GIRAPH_HOME/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.2.0-jar-with-dependencies.jar
>>> org.apache.giraph.GiraphRunner -D giraph.zkList="zkNode.net:2081"
>>> org.apache.giraph.examples.SimpleShortestPathsComputation -vif
>>> org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat
>>> -vip /user/hduser/rrdata/tiny_graph.txt -vof
>>> org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op
>>> /user/hduser/rrdata/output -w 1 -yj
>>> $GIRAPH_HOME/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.2.0-jar-with-dependencies.jar
>>>
>>> Trimmed Console Output:
>>> 13/11/27 11:19:58 INFO yarn.GiraphYarnClient:
>>> appattempt_1385518875931_0002_000001, State: ACCEPTED, Containers used: 1
>>> 13/11/27 11:20:00 ERROR yarn.GiraphYarnClient: Giraph:
>>> org.apache.giraph.examples.SimpleShortestPathsComputation reports FAILED
>>> state, diagnostics show: Application application_1385518875931_0002 failed
>>> 2 times due to AM Container for appattempt_1385518875931_0002_000002 exited
>>> with  exitCode: 1 due to: Exception from container-launch:
>>>  org.apache.hadoop.util.Shell$ExitCodeException:
>>> at org.apache.hadoop.util.Shell.runCommand(Shell.java:464)
>>> at org.apache.hadoop.util.Shell.run(Shell.java:379)
>>>  at
>>> org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:589)
>>> at
>>> org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:195)
>>>  at
>>> org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:283)
>>> at
>>> org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:79)
>>>  at java.util.concurrent.FutureTask.run(FutureTask.java:262)
>>> at
>>> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
>>>  at
>>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
>>> at java.lang.Thread.run(Thread.java:744)
>>>
>>>
>>> Thanx,
>>> Vishal
>>>
>>>
>>> On Tue, Nov 19, 2013 at 3:16 PM, Mohammad Islam <mislam77@yahoo.com>wrote:
>>>
>>>> Rob,
>>>> I understand your frustration.
>>>> I'm pre-occupied with some other stuffs in next couple of days.
>>>> If no one replied by then, I will recreate the situation here and try
>>>> to give you more concrete help.
>>>>
>>>> Regards,
>>>> Mohammad
>>>>
>>>>
>>>>   On Tuesday, November 19, 2013 2:56 AM, Rob Vesse <
>>>> rvesse@dotnetrdf.org> wrote:
>>>>   Mohammad
>>>>
>>>> Comments inline:
>>>>
>>>> From: Mohammad Islam <mislam77@yahoo.com>
>>>> Reply-To: <user@giraph.apache.org>
>>>> Date: Monday, 18 November 2013 22:24
>>>> To: "user@giraph.apache.org" <user@giraph.apache.org>
>>>> Subject: Re: GiraphApplicationMaster not found (WAS: Giraph and Hadoop
>>>> 2.2.0)
>>>>
>>>> I used the following shell script to run PR where my current working
>>>> directory contains the graph*.jar in Hadoop 2.1.1.
>>>> . You can try something similar.
>>>>
>>>>
>>>> I already am.
>>>>
>>>>
>>>>
>>>>
>>>> HAD_VERSION=2.1.1-SNAPSHOT
>>>> hadoop fs -rmr out
>>>> export GIRAPH_HOME=/home/mislam/softwares/giraph
>>>> #export
>>>> GIRAPH_CORE=$GIRAPH_HOME/giraph-core/target/giraph-1.1.0-SNAPSHOT-for-hadoop-$HAD_VERSION-jar-with-dependencies.jar
>>>> #export
>>>> GIRAPH_EXAMPLE=$GIRAPH_HOME/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-$HAD_VERSION-jar-with-dependencies.jar
>>>>
>>>>
>>>> CLASSPATH=$CLASSPATH:$GIRAPH_HOME/conf
>>>>
>>>>
>>>> What is the point of putting the conf directory on the CLASSPATH?  I
>>>> assume this is only to pick up the giraph configuration but at the same
>>>> time there is nothing to stop me putting my Giraph specific config in one
>>>> of the other Hadoop configuration files e.g. core-site.xml?
>>>>
>>>> #CLASSPATH=$CLASSPATH:$GIRAPH_CORE
>>>> #CLASSPATH=$CLASSPATH:$GIRAPH_EXAMPLE
>>>>
>>>> export CLASSPATH=$CLASSPATH
>>>> export HADOOP_CLASSPATH=$HADOOP_CLASSPATH:$CLASSPATH
>>>>
>>>> echo $HADOOP_CLASSPATH
>>>>
>>>>
>>>> I assume the point of the above is to ensure that the Giraph config
>>>> file is on the class path Hadoop actually uses but adding this makes no
>>>> difference to me, I get exactly the same failure as before.  Modifying the
>>>> logic to add the examples JAR onto the class path does not help either.
>>>>
>>>>
>>>>
>>>> hadoop --config $HADOOP_HOME/etc/hadoop jar
>>>> giraph-examples-1.1.0-SNAPSHOT-for-hadoop-$HAD_VERSION-jar-with-dependencies.jar
>>>>  org.apache.giraph.GiraphRunner
>>>> org.apache.giraph.examples.SimplePageRankComputation -c
>>>> org.apache.giraph.combiner.DoubleSumCombiner -w 1 -yh 1024 -yj
>>>> giraph-examples-1.1.0-SNAPSHOT-for-hadoop-$HAD_VERSION-jar-with-dependencies.jar
>>>> -vif
>>>> org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat
>>>> -vof org.apache.giraph.io.formats.IdWithValueTextOutputFormat -mc
>>>> org.apache.giraph.examples.SimplePageRankComputation\$SimplePageRankMasterCompute
>>>> -vip input -op out
>>>>
>>>>
>>>> This is not the same command that I am running, also DoubleSumCombiner
>>>> gives a ClassNotFoundException, you actually want DoubleSumMessageCombiner.
>>>>  If I adapt my script to run your command I experience the exact same error
>>>> as I do trying to run the command I showed so I am still nowhere.
>>>>
>>>> I'm getting a little frustrated that no-one has any idea what the
>>>> problem is here, either this is a simple misconfiguration on my part or a
>>>> bug in Giraph for Hadoop 2.2.0 ?  Given the thread so far and the fact that
>>>> I can run MR based Giraph on Hadoop 1.2.1 this is looking increasingly
>>>> unlikely I'm starting to lean heavily towards the latter option.
>>>>
>>>> Rob
>>>>
>>>>
>>>>
>>>>   On Monday, November 18, 2013 2:24 AM, Rob Vesse <rvesse@dotnetrdf.org>
>>>> wrote:
>>>>  Hey all
>>>>
>>>> Bumping this thread because I am still completely blocked on this and
>>>> hoping someone can help me.  As explained earlier in the thread I have
>>>> Giraph built for pure YARN on stable Hadoop 2.2.0 release like so:
>>>>
>>>> mvn –Phadoop_yarn –Dhadoop.version=2.2.0 –DskipTests=true clean install
>>>>
>>>> But when I try and run the simple shortest paths demo like so:
>>>>
>>>> $> bin/hadoop jar
>>>> /Users/rvesse/Documents/Work/Code/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.2.0-jar-with-dependencies.jar
>>>> org.apache.giraph.GiraphRunner
>>>> org.apache.giraph.examples.SimpleShortestPathsComputation -vif
>>>> org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat
>>>> -vip /user/rvesse/tiny_graph.txt -vof
>>>> org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op
>>>> /user/rvesse/shortestpaths -w 1 -yj
>>>> /Users/rvesse/Documents/Work/Code/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.2.0-jar-with-dependencies.jar
>>>>
>>>> The application fails and the YARN logs show the following error:
>>>>
>>>> Exception in thread "main" java.lang.NoClassDefFoundError: org/apache/giraph/yarn/GiraphApplicationMaster
>>>> Caused by: java.lang.ClassNotFoundException: org.apache.giraph.yarn.GiraphApplicationMaster
>>>> 	at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
>>>> 	at java.security.AccessController.doPrivileged(Native Method)
>>>> 	at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
>>>> 	at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
>>>> 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
>>>> 	at java.lang.ClassLoader.loadClass(ClassLoader.java:247)
>>>>
>>>>
>>>>
>>>>
>>>>
>>>> Any ideas why the GiraphApplicationMaster would not be found?  Have I just
got something basic wrong in my configuration or is this a bug in Giraph?
>>>>
>>>>
>>>> I found an earlier thread on the same topic (http://mail-archives.apache.org/mod_mbox/giraph-user/201307.mbox/%3c51E5A4D1.40006@googlemail.com%3e)
but it was never resolved hence why I have now changed the topic in the hope it will jog someone's
memory
>>>>
>>>>
>>>> Cheers,
>>>>
>>>>
>>>> Rob
>>>>
>>>>
>>>> From: Rob Vesse <rvesse@dotnetrdf.org>
>>>> Reply-To: <user@giraph.apache.org>
>>>> Date: Friday, 15 November 2013 14:14
>>>> To: <user@giraph.apache.org>
>>>> Subject: Re: Giraph and Hadoop 2.2.0
>>>>
>>>> Adding the –yj argument to specify the YARN JARs doesn't make any
>>>> difference.
>>>>
>>>> Here is the complete console output from my run:
>>>>
>>>> bin/hadoop jar
>>>> /Users/rvesse/Documents/Work/Code/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.2.0-jar-with-dependencies.jar
>>>> org.apache.giraph.GiraphRunner
>>>> org.apache.giraph.examples.SimpleShortestPathsComputation -vif
>>>> org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat
>>>> -vip /user/rvesse/tiny_graph.txt -vof
>>>> org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op
>>>> /user/rvesse/shortestpaths/3 -w 1 -yj
>>>> /Users/rvesse/Documents/Work/Code/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.2.0-jar-with-dependencies.jar
>>>> 2013-11-15 14:11:22.897 java[4877:1203] Unable to load realm info from
>>>> SCDynamicStore
>>>> 13/11/15 14:11:22 WARN util.NativeCodeLoader: Unable to load
>>>> native-hadoop library for your platform... using builtin-java classes where
>>>> applicable
>>>> 13/11/15 14:11:24 INFO utils.ConfigurationUtils: No edge input format
>>>> specified. Ensure your InputFormat does not require one.
>>>> 13/11/15 14:11:24 INFO utils.ConfigurationUtils: No edge output format
>>>> specified. Ensure your OutputFormat does not require one.
>>>> 13/11/15 14:11:24 INFO yarn.GiraphYarnClient: Final output path is:
>>>> hdfs://localhost/user/rvesse/shortestpaths/3
>>>> 13/11/15 14:11:24 INFO yarn.GiraphYarnClient: Running Client
>>>> 13/11/15 14:11:24 INFO client.RMProxy: Connecting to ResourceManager at
>>>> /0.0.0.0:8032
>>>> 13/11/15 14:11:24 INFO yarn.GiraphYarnClient: Got node report from ASM
>>>> for, nodeId=mbp-rvesse.home:49981, nodeAddressmbp-rvesse.home:8042,
>>>> nodeRackName/default-rack, nodeNumContainers0
>>>> 13/11/15 14:11:24 INFO yarn.GiraphYarnClient: Defaulting per-task heap
>>>> size to 1024MB.
>>>> 13/11/15 14:11:24 INFO yarn.GiraphYarnClient: Obtained new Application
>>>> ID: application_1384523910015_0004
>>>> 13/11/15 14:11:24 INFO Configuration.deprecation: mapred.job.id is
>>>> deprecated. Instead, use mapreduce.job.id
>>>> 13/11/15 14:11:24 INFO yarn.GiraphYarnClient: Set the environment for
>>>> the application master
>>>> 13/11/15 14:11:24 INFO yarn.GiraphYarnClient: Environment for AM
>>>> :{CLASSPATH=${CLASSPATH}:./*:$HADOOP_CONF_DIR:$HADOOP_COMMON_HOME/share/hadoop/common/*:$HADOOP_COMMON_HOME/share/hadoop/common/lib/*:$HADOOP_HDFS_HOME/share/hadoop/hdfs/*:$HADOOP_HDFS_HOME/share/hadoop/hdfs/lib/*:$HADOOP_YARN_HOME/share/hadoop/yarn/*:$HADOOP_YARN_HOME/share/hadoop/yarn/lib/*:$HADOOP_MAPRED_HOME/share/hadoop/mapreduce/*,$HADOOP_MAPRED_HOME/share/hadoop/mapreduce/lib/*}
>>>> 13/11/15 14:11:24 INFO yarn.GiraphYarnClient: buildLocalResourceMap ....
>>>> 13/11/15 14:11:24 INFO Configuration.deprecation: mapred.output.dir is
>>>> deprecated. Instead, use mapreduce.output.fileoutputformat.outputdir
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Registered file in
>>>> LocalResources ::
>>>> hdfs://localhost/user/rvesse/giraph_yarn_jar_cache/application_1384523910015_0004/giraph-conf.xml
>>>> 13/11/15 14:11:25 INFO yarn.GiraphYarnClient: LIB JARS
>>>> :/Users/rvesse/Documents/Work/Code/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.2.0-jar-with-dependencies.jar
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name .
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking .
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name null
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking null
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/etc/hadoop
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/etc/hadoop
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/common/lib/*
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/common/lib
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/common/*
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/common
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/hdfs
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/hdfs
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/hdfs/lib/*
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/hdfs/lib
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/hdfs/*
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/hdfs
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/yarn/lib/*
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/yarn/lib
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/yarn/*
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/yarn
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/mapreduce/lib/*
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/mapreduce/lib
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/mapreduce/*
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking
>>>> /Users/rvesse/Documents/Apps/hadoop-2.2.0/share/hadoop/mapreduce
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: Class path name
>>>> /contrib/capacity-scheduler/*.jar
>>>> 13/11/15 14:11:25 INFO yarn.YarnUtils: base path checking
>>>> /contrib/capacity-scheduler
>>>> 13/11/15 14:11:25 INFO yarn.GiraphYarnClient:
>>>> ApplicationSumbissionContext for GiraphApplicationMaster launch container
>>>> is populated.
>>>> 13/11/15 14:11:25 INFO yarn.GiraphYarnClient: Submitting application to
>>>> ASM
>>>> 13/11/15 14:11:25 INFO impl.YarnClientImpl: Submitted application
>>>> application_1384523910015_0004 to ResourceManager at /0.0.0.0:8032
>>>> 13/11/15 14:11:25 INFO yarn.GiraphYarnClient: Got new appId after
>>>> submission :application_1384523910015_0004
>>>> 13/11/15 14:11:25 INFO yarn.GiraphYarnClient: GiraphApplicationMaster
>>>> container request was submitted to ResourceManager for job: Giraph:
>>>> org.apache.giraph.examples.SimpleShortestPathsComputation
>>>> 13/11/15 14:11:26 INFO yarn.GiraphYarnClient: Giraph:
>>>> org.apache.giraph.examples.SimpleShortestPathsComputation, Elapsed: 0.82
>>>> secs
>>>> 13/11/15 14:11:26 INFO yarn.GiraphYarnClient:
>>>> appattempt_1384523910015_0004_000001, State: ACCEPTED, Containers used: 1
>>>> 13/11/15 14:11:29 ERROR yarn.GiraphYarnClient: Giraph:
>>>> org.apache.giraph.examples.SimpleShortestPathsComputation reports FAILED
>>>> state, diagnostics show: Application application_1384523910015_0004 failed
>>>> 2 times due to AM Container for appattempt_1384523910015_0004_000002 exited
>>>> with  exitCode: 1 due to: Exception from container-launch:
>>>> org.apache.hadoop.util.Shell$ExitCodeException:
>>>> at org.apache.hadoop.util.Shell.runCommand(Shell.java:464)
>>>>  at org.apache.hadoop.util.Shell.run(Shell.java:379)
>>>> at
>>>> org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:589)
>>>>  at
>>>> org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:195)
>>>> at
>>>> org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:283)
>>>> at
>>>> org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:79)
>>>>  at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
>>>> at java.util.concurrent.FutureTask.run(FutureTask.java:138)
>>>>  at
>>>> java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:895)
>>>> at
>>>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:918)
>>>>  at java.lang.Thread.run(Thread.java:695)
>>>>
>>>>
>>>> .Failing this attempt.. Failing the application.
>>>> 13/11/15 14:11:29 INFO yarn.GiraphYarnClient: Cleaning up HDFS
>>>> distributed cache directory for Giraph job.
>>>> 13/11/15 14:11:29 INFO yarn.GiraphYarnClient: Completed Giraph:
>>>> org.apache.giraph.examples.SimpleShortestPathsComputation: FAILED, total
>>>> running time: 0 minutes, 3 seconds.
>>>>
>>>> And I see the same error in the logs:
>>>>
>>>> Exception in thread "main" java.lang.NoClassDefFoundError: org/apache/giraph/yarn/GiraphApplicationMaster
>>>> Caused by: java.lang.ClassNotFoundException: org.apache.giraph.yarn.GiraphApplicationMaster
>>>> 	at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
>>>> 	at java.security.AccessController.doPrivileged(Native Method)
>>>> 	at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
>>>> 	at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
>>>> 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
>>>> 	at java.lang.ClassLoader.loadClass(ClassLoader.java:247)
>>>>
>>>>
>>>> Any more ideas?
>>>>
>>>>
>>>>
>>>>
>>>>
>>>> Rob
>>>>
>>>>
>>>> From: Mohammad Islam <mislam77@yahoo.com>
>>>> Reply-To: <user@giraph.apache.org>
>>>> Date: Thursday, 14 November 2013 20:36
>>>> To: "user@giraph.apache.org" <user@giraph.apache.org>
>>>> Subject: Re: Giraph and Hadoop 2.2.0
>>>>
>>>> I tried the following command few months back. I found you are not
>>>> passing some params.
>>>>
>>>> bin/hadoop --config etc/hadoop jar
>>>> /export/home/clei/giraph/giraph-1.0.0/giraph-examples/target/giraph-examples-1.?.0-for-hadoop-???-jar-with-dependencies.jar
>>>> org.apache.giraph.GiraphRunner
>>>> org.apache.giraph.examples.SimplePageRankVertexOpt -c
>>>> org.apache.giraph.combiner.DoubleSumCombiner -w 35 -yh 20480 -yj
>>>> giraph-examples-1.?.?-for-hadoop-2.??-jar-with-dependencies.jar -vif
>>>> org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat -of
>>>> org.apache.giraph.io.formats.IdWithValueTextOutputFormat -vip
>>>> /user/me/input -op /user/me/output_35w_20G_80m_1
>>>>
>>>>
>>>>   On Thursday, November 14, 2013 3:22 AM, Rob Vesse <
>>>> rvesse@dotnetrdf.org> wrote:
>>>>  It's the same command line I showed earlier, just trying to run the
>>>> example application:
>>>>
>>>> mbp-rvesse:hadoop-2.2.0 rvesse$ bin/hadoop jar
>>>> /Users/rvesse/Documents/Work/Code/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.2.0-jar-with-dependencies.jar
>>>> org.apache.giraph.GiraphRunner
>>>> org.apache.giraph.examples.SimpleShortestPathsComputation -vif
>>>> org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat
>>>> -vip /user/rvesse/tiny_graph.txt -vof
>>>> org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op
>>>> /user/rvesse/shortestpaths/2 -w 1
>>>>
>>>> Rob
>>>>
>>>> From: Mohammad Islam <mislam77@yahoo.com>
>>>> Reply-To: <user@giraph.apache.org>
>>>> Date: Thursday, 14 November 2013 05:57
>>>> To: "user@giraph.apache.org" <user@giraph.apache.org>
>>>> Subject: Re: Giraph and Hadoop 2.2.0
>>>>
>>>> What are you running? PR?
>>>> What is the command line?
>>>>
>>>>
>>>>
>>>>   On Wednesday, November 13, 2013 8:30 AM, Rob Vesse <
>>>> rvesse@dotnetrdf.org> wrote:
>>>>  So I fixed the previous issue I was having which I reported and
>>>> submitted a patch as GIRAPH-795
>>>>
>>>> I then went ahead with installing and configuring my external Zookeeper
>>>> appropriately and tried running again but now the YARN application fails
>>>> and I find the following error in the logs:
>>>>
>>>> Exception in thread "main" java.lang.NoClassDefFoundError:
>>>>  org/apache/giraph/yarn/GiraphApplicationMaster
>>>> Caused by: java.lang.ClassNotFoundException: org.apache.giraph.yarn.GiraphApplicationMaster
>>>> 	at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
>>>> 	at java.security.AccessController.doPrivileged(Native Method)
>>>> 	at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
>>>> 	at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
>>>> 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
>>>> 	at java.lang.ClassLoader.loadClass(ClassLoader.java:247)
>>>>
>>>>
>>>> Anybody have idea what the cause of this one might be or how to fix it?
>>>>
>>>>
>>>> Cheers,
>>>>
>>>>
>>>> Rob
>>>>
>>>>
>>>> From: Rob Vesse <rvesse@dotnetrdf.org>
>>>> Reply-To: <user@giraph.apache.org>
>>>> Date: Wednesday, 13 November 2013 15:35
>>>> To: <user@giraph.apache.org>
>>>> Subject: Re: Giraph and Hadoop 2.2.0
>>>>
>>>> Mohammad
>>>>
>>>> This got me a build that at least attempts to start to run but not I
>>>> see the following:
>>>>
>>>> mbp-rvesse:hadoop-2.2.0 rvesse$ bin/hadoop jar
>>>> /Users/rvesse/Documents/Work/Code/giraph/giraph-examples/target/giraph-examples-1.1.0-SNAPSHOT-for-hadoop-2.2.0-jar-with-dependencies.jar
>>>> org.apache.giraph.GiraphRunner
>>>> org.apache.giraph.examples.SimpleShortestPathsComputation -vif
>>>> org.apache.giraph.io.formats.JsonLongDoubleFloatDoubleVertexInputFormat
>>>> -vip /user/rvesse/tiny_graph.txt -vof
>>>> org.apache.giraph.io.formats.IdWithValueTextOutputFormat -op
>>>> /user/rvesse/shortestpaths/2 -w 1
>>>> 2013-11-13 15:13:29.908 java[17402:1203] Unable to load realm info from
>>>> SCDynamicStore
>>>> 13/11/13 15:13:29 WARN util.NativeCodeLoader: Unable to load
>>>> native-hadoop library for your platform... using builtin-java classes where
>>>> applicable
>>>> 13/11/13 15:13:31 INFO utils.ConfigurationUtils: No edge input format
>>>> specified. Ensure your InputFormat does not require one.
>>>> 13/11/13 15:13:31 INFO utils.ConfigurationUtils: No edge output format
>>>> specified. Ensure your OutputFormat does not require one.
>>>> 13/11/13 15:13:31 INFO yarn.GiraphYarnClient: Final output path is:
>>>> hdfs://localhost/user/rvesse/shortestpaths/2
>>>> Exception in thread "main" java.lang.NullPointerException
>>>>  at
>>>> org.apache.giraph.yarn.GiraphYarnClient.checkJobLocalZooKeeperSupported(GiraphYarnClient.java:460)
>>>> at
>>>> org.apache.giraph.yarn.GiraphYarnClient.run(GiraphYarnClient.java:116)
>>>>  at org.apache.giraph.GiraphRunner.run(GiraphRunner.java:96)
>>>> at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70)
>>>>  at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:84)
>>>> at org.apache.giraph.GiraphRunner.main(GiraphRunner.java:126)
>>>>  at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>>> at
>>>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>>>>  at
>>>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>>>> at java.lang.reflect.Method.invoke(Method.java:597)
>>>>  at org.apache.hadoop.util.RunJar.main(RunJar.java:212)
>>>>
>>>> Which indirectly implies that I have some missing configuration to run
>>>> Giraph on YARN.  I don't think that should be a NPE and it looks to be a
>>>> trivial fix so I'll try and fix and send a pull request for that.
>>>>
>>>> The error message I should receive if the NPE wasn't happening is the
>>>> following:
>>>>
>>>> Giraph on YARN does not currentlysupport Giraph-managed ZK instances:
>>>> use a standalone ZooKeeper.
>>>>
>>>> What configuration options do I need to have set to point Giraph at an
>>>> external Zookeeper?
>>>>
>>>> Cheers,
>>>>
>>>> Rob
>>>>
>>>> From: Mohammad Islam <mislam77@yahoo.com>
>>>> Reply-To: <user@giraph.apache.org>
>>>> Date: Wednesday, 13 November 2013 11:15
>>>> To: "user@giraph.apache.org" <user@giraph.apache.org>
>>>> Subject: Re: Giraph and Hadoop 2.2.0
>>>>
>>>> Hi Rob,
>>>> Did you try with this command "mvn -Phadoop_yarn -Dhadoop.version=2.2.0
>>>> clean package -DskipTests"?
>>>> Regards,
>>>> Mohammad
>>>>
>>>>
>>>>   On Wednesday, November 13, 2013 2:55 AM, Rob Vesse <
>>>> rvesse@dotnetrdf.org> wrote:
>>>>  Hi all
>>>>
>>>> I'm having trouble getting Giraph to build and run against a Hadoop
>>>> 2.2.0 installation.  I tried the hadoop_2.0.3 profile with no luck because
>>>> I get class cast errors when trying to run the examples.
>>>>
>>>> Is there a specific profile I should be building to support Hadoop
>>>> 2.2.0 or is this not supported yet?
>>>>
>>>> Thanks,
>>>>
>>>> Rob
>>>>
>>>>
>>>>
>>>>
>>>>
>>>>
>>>>
>>>>
>>>>
>>>>
>>>>
>>>
>>
>

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