Return-Path: X-Original-To: apmail-giraph-dev-archive@www.apache.org Delivered-To: apmail-giraph-dev-archive@www.apache.org Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by minotaur.apache.org (Postfix) with SMTP id 8E62C10747 for ; Wed, 12 Feb 2014 09:27:00 +0000 (UTC) Received: (qmail 80021 invoked by uid 500); 12 Feb 2014 09:26:59 -0000 Delivered-To: apmail-giraph-dev-archive@giraph.apache.org Received: (qmail 79987 invoked by uid 500); 12 Feb 2014 09:26:59 -0000 Mailing-List: contact dev-help@giraph.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: dev@giraph.apache.org Delivered-To: mailing list dev@giraph.apache.org Received: (qmail 79975 invoked by uid 99); 12 Feb 2014 09:26:59 -0000 Received: from athena.apache.org (HELO athena.apache.org) (140.211.11.136) by apache.org (qpsmtpd/0.29) with ESMTP; Wed, 12 Feb 2014 09:26:59 +0000 X-ASF-Spam-Status: No, hits=1.5 required=5.0 tests=HTML_MESSAGE,RCVD_IN_DNSWL_LOW,SPF_PASS X-Spam-Check-By: apache.org Received-SPF: pass (athena.apache.org: domain of claudio.martella@gmail.com designates 209.85.216.41 as permitted sender) Received: from [209.85.216.41] (HELO mail-qa0-f41.google.com) (209.85.216.41) by apache.org (qpsmtpd/0.29) with ESMTP; Wed, 12 Feb 2014 09:26:53 +0000 Received: by mail-qa0-f41.google.com with SMTP id w8so13632726qac.0 for ; Wed, 12 Feb 2014 01:26:33 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=mime-version:in-reply-to:references:from:date:message-id:subject:to :cc:content-type; bh=is0E2wUQxc7O63mbyVadZJ7bL9yzCtzJfQRiQVp3/pQ=; b=PNsE/Q9kHtR1NLKSXMQw2r0cAZv7EpPJ0uCmp4SUp+LnlLDYHktq74cKrYoLAJttfv /IHk5mcUrKTiWwbEj/G4t7rS2K5/Oc250goX8cfV4GNxoHcBNQfQMmLya84kvD80wr+8 eXuBaLsWiQm0gU8k2AEl5tgHT+vQByn4XdsN/veIpJzvfKgLrzSTbVCt/VGYo3jvAaYg sBeOmQapiEcd+TznztTYo6h8mxk9oF7AUzDkREjcQBiHfC9OAjFUYsPFru8qPaRM2pxX IDyNL3/7lz01XADHI9V3uJqKgoZt6szORlI8JI1zExffL2G3bCZjlydeTK1jvbTYFa6A yWoQ== X-Received: by 10.224.14.70 with SMTP id f6mr66035864qaa.31.1392197192932; Wed, 12 Feb 2014 01:26:32 -0800 (PST) MIME-Version: 1.0 Received: by 10.140.48.175 with HTTP; Wed, 12 Feb 2014 01:26:12 -0800 (PST) In-Reply-To: <52FB38C4.5050002@apache.org> References: <52FAB4BE.2000005@apache.org> <52FB38C4.5050002@apache.org> From: Claudio Martella Date: Wed, 12 Feb 2014 10:26:12 +0100 Message-ID: Subject: Re: GIRAPH-825 and GIRAPH-840 To: Sebastian Schelter Cc: "dev@giraph.apache.org" Content-Type: multipart/alternative; boundary=047d7bdc78102654cd04f2322b33 X-Virus-Checked: Checked by ClamAV on apache.org --047d7bdc78102654cd04f2322b33 Content-Type: text/plain; charset=ISO-8859-1 the problem is that you're running with more threads than in-memory partitions. increase the number of partitions in memory to be at least the number of threads. i have no time right now to check the latest code, but you should not set the number of stickypartitions by hand. On Wed, Feb 12, 2014 at 10:03 AM, Sebastian Schelter wrote: > I ran a first test with the new DiskBackedPartitionStore and it didn't > work for me unfortunately. The job never leaves the input phase (superstep > -1). I sshd onto one of the workers and it seems to wait forever on > DiskBackedPartitionStore.getOrCreatePartition: > > java.lang.Thread.State: BLOCKED (on object monitor) > at org.apache.giraph.partition.DiskBackedPartitionStore. > getOrCreatePartition(DiskBackedPartitionStore.java:226) > - waiting to lock <0x00000000aeb757c8> (a > org.apache.giraph.partition.DiskBackedPartitionStore$MetaPartition) > > Here are the custom arguments for my run, let me know if I should do > another run with a different config. > > giraph.oneToAllMsgSending=true > giraph.isStaticGraph=true > giraph.numComputeThreads=15 > giraph.numInputThreads=15 > giraph.numOutputThreads=15 > giraph.maxNumberOfSupersteps=30 > giraph.useOutOfCoreGraph=true > giraph.stickyPartitions=5 > > I also ran the job without using oneToAllMsgSending and saw the same > behavior. > > Best, > Sebastian > > > > On 02/12/2014 12:44 AM, Claudio Martella wrote: > >> please give it a test. i've been working on this with armando. i'll give a >> review, but we have been testing it for while. we'd really appreciate if >> somebody else could run some additional tests as well. thanks! >> >> >> On Wed, Feb 12, 2014 at 12:39 AM, Sebastian Schelter >> wrote: >> >> I'll test the patch from GIRAPH-825 this week. >>> >>> >>> On 02/12/2014 12:10 AM, Roman Shaposhnik wrote: >>> >>> Hi! >>>> >>>> Given how big the diff here are: >>>> https://issues.apache.org/jira/browse/GIRAPH-825 >>>> https://issues.apache.org/jira/browse/GIRAPH-840 >>>> I am wondering whether it is realistic >>>> to have them in 1.1.0. >>>> >>>> Would appreciate folks chiming in. >>>> >>>> Thanks, >>>> Roman. >>>> >>>> >>>> >>> >> >> > -- Claudio Martella --047d7bdc78102654cd04f2322b33--