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From "Nico Kruber (JIRA)" <j...@apache.org>
Subject [jira] [Updated] (FLINK-10491) Deadlock during spilling data in SpillableSubpartition
Date Tue, 09 Oct 2018 15:26:00 GMT

     [ https://issues.apache.org/jira/browse/FLINK-10491?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]

Nico Kruber updated FLINK-10491:
--------------------------------
    Fix Version/s: 1.5.5
                   1.6.2
                   1.7.0

> Deadlock during spilling data in SpillableSubpartition 
> -------------------------------------------------------
>
>                 Key: FLINK-10491
>                 URL: https://issues.apache.org/jira/browse/FLINK-10491
>             Project: Flink
>          Issue Type: Bug
>          Components: Network
>    Affects Versions: 1.6.1, 1.5.4
>            Reporter: Piotr Nowojski
>            Assignee: zhijiang
>            Priority: Critical
>              Labels: pull-request-available
>             Fix For: 1.7.0, 1.6.2, 1.5.5
>
>
> Originally reported here: [https://lists.apache.org/thread.html/472c8f4a2711c5e217fadd9a88f8c73670218e7432bb81ba3f5076db@%3Cuser.flink.apache.org%3E]
> Thread dump (from 1.5.3 version) showing two deadlocked threads, because they are taking
two locks in different order:
> {noformat}
> Thread-1
> "DataSink (DATA#HadoopFileOutputFormat ) (1/2)@11002" prio=5 tid=0x3e2 nid=NA waiting
for monitor entry
> waiting for Map (Key Extractor) (1/10)@9967 to release lock on <0x2dfb> (a java.util.ArrayDeque)
> at org.apache.flink.runtime.io.network.partition.SpillableSubpartition.releaseMemory(SpillableSubpartition.java:223)
> at org.apache.flink.runtime.io.network.partition.ResultPartition.releaseMemory(ResultPartition.java:373)
> at org.apache.flink.runtime.io.network.buffer.LocalBufferPool.setNumBuffers(LocalBufferPool.java:355)
> - locked <0x2dfd> (a java.util.ArrayDeque)
> at org.apache.flink.runtime.io.network.buffer.NetworkBufferPool.redistributeBuffers(NetworkBufferPool.java:402)
> at org.apache.flink.runtime.io.network.buffer.NetworkBufferPool.recycleMemorySegments(NetworkBufferPool.java:203)
> - locked <0x2da5> (a java.lang.Object)
> at org.apache.flink.runtime.io.network.buffer.NetworkBufferPool.recycleMemorySegments(NetworkBufferPool.java:193)
> at org.apache.flink.runtime.io.network.partition.consumer.SingleInputGate.returnExclusiveSegments(SingleInputGate.java:318)
> at org.apache.flink.runtime.io.network.partition.consumer.RemoteInputChannel.releaseAllResources(RemoteInputChannel.java:259)
> at org.apache.flink.runtime.io.network.partition.consumer.SingleInputGate.getNextBufferOrEvent(SingleInputGate.java:578)
> at org.apache.flink.runtime.io.network.partition.consumer.SingleInputGate.pollNextBufferOrEvent(SingleInputGate.java:507)
> at org.apache.flink.runtime.io.network.partition.consumer.UnionInputGate.waitAndGetNextInputGate(UnionInputGate.java:213)
> at org.apache.flink.runtime.io.network.partition.consumer.UnionInputGate.getNextBufferOrEvent(UnionInputGate.java:163)
> at org.apache.flink.runtime.io.network.api.reader.AbstractRecordReader.getNextRecord(AbstractRecordReader.java:86)
> at org.apache.flink.runtime.io.network.api.reader.MutableRecordReader.next(MutableRecordReader.java:47)
> at org.apache.flink.runtime.operators.util.ReaderIterator.next(ReaderIterator.java:73)
> at org.apache.flink.runtime.operators.DataSinkTask.invoke(DataSinkTask.java:216)
> at org.apache.flink.runtime.taskmanager.Task.run(Task.java:703)
> at java.lang.Thread.run(Thread.java:745)
> Thread-2
> "Map (Key Extractor) (1/10)@9967" prio=5 tid=0xaab nid=NA waiting for monitor entry
> java.lang.Thread.State: BLOCKED
> blocks DataSink (DATA#HadoopFileOutputFormat ) (1/2)@11002
> waiting for DataSink (DATA#HadoopFileOutputFormat ) (1/2)@11002 to release lock on <0x2dfd>
(a java.util.ArrayDeque)
> at org.apache.flink.runtime.io.network.buffer.LocalBufferPool.recycle(LocalBufferPool.java:261)
> at org.apache.flink.runtime.io.network.buffer.NetworkBuffer.deallocate(NetworkBuffer.java:171)
> at org.apache.flink.shaded.netty4.io.netty.buffer.AbstractReferenceCountedByteBuf.release(AbstractReferenceCountedByteBuf.java:106)
> at org.apache.flink.runtime.io.network.buffer.NetworkBuffer.recycleBuffer(NetworkBuffer.java:146)
> at org.apache.flink.runtime.io.network.buffer.BufferConsumer.close(BufferConsumer.java:110)
> at org.apache.flink.runtime.io.network.partition.SpillableSubpartition.spillFinishedBufferConsumers(SpillableSubpartition.java:271)
> at org.apache.flink.runtime.io.network.partition.SpillableSubpartition.add(SpillableSubpartition.java:117)
> - locked <0x2dfb> (a java.util.ArrayDeque)
> at org.apache.flink.runtime.io.network.partition.SpillableSubpartition.add(SpillableSubpartition.java:96)
> - locked <0x2dfc> (a org.apache.flink.runtime.io.network.partition.SpillableSubpartition)
> at org.apache.flink.runtime.io.network.partition.ResultPartition.addBufferConsumer(ResultPartition.java:255)
> at org.apache.flink.runtime.io.network.api.writer.RecordWriter.requestNewBufferBuilder(RecordWriter.java:211)
> at org.apache.flink.runtime.io.network.api.writer.RecordWriter.sendToTarget(RecordWriter.java:142)
> at org.apache.flink.runtime.io.network.api.writer.RecordWriter.emit(RecordWriter.java:105)
> at org.apache.flink.runtime.operators.shipping.OutputCollector.collect(OutputCollector.java:65)
> at org.apache.flink.runtime.operators.util.metrics.CountingCollector.collect(CountingCollector.java:35)
> at org.apache.flink.runtime.operators.MapDriver.run(MapDriver.java:103)
> at org.apache.flink.runtime.operators.BatchTask.run(BatchTask.java:503)
> at org.apache.flink.runtime.operators.BatchTask.invoke(BatchTask.java:368)
> at org.apache.flink.runtime.taskmanager.Task.run(Task.java:703)
> at java.lang.Thread.run(Thread.java:745)
> {noformat}
> The same pattern can occur on the master (but with slightly shifted line numbers)
> CC [~NicoK]



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